Experiment: NL-CCM, start OD=0.3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03369 and MPMX19_03370 overlap by 4 nucleotides MPMX19_03370 and MPMX19_03371 are separated by 2 nucleotides MPMX19_03371 and MPMX19_03372 are separated by 14 nucleotides
MPMX19_03369: MPMX19_03369 - hypothetical protein, at 745,277 to 746,047
_03369
MPMX19_03370: MPMX19_03370 - hypothetical protein, at 746,044 to 746,520
_03370
MPMX19_03371: MPMX19_03371 - hypothetical protein, at 746,523 to 746,906
_03371
MPMX19_03372: MPMX19_03372 - hypothetical protein, at 746,921 to 750,010
_03372
Position (kb) 746
747 Strain fitness (log2 ratio) -2
-1
0
1 at 745.608 kb on + strand, within MPMX19_03369 at 745.609 kb on - strand, within MPMX19_03369 at 746.039 kb on + strand at 746.040 kb on - strand at 746.040 kb on - strand at 746.551 kb on + strand at 746.551 kb on + strand at 746.552 kb on - strand at 746.552 kb on - strand at 746.552 kb on - strand at 746.573 kb on - strand, within MPMX19_03371 at 746.737 kb on + strand, within MPMX19_03371 at 746.737 kb on + strand, within MPMX19_03371 at 746.737 kb on + strand, within MPMX19_03371 at 746.737 kb on + strand, within MPMX19_03371 at 746.738 kb on - strand, within MPMX19_03371 at 746.738 kb on - strand, within MPMX19_03371 at 746.738 kb on - strand, within MPMX19_03371 at 746.738 kb on - strand, within MPMX19_03371 at 746.776 kb on + strand, within MPMX19_03371 at 746.776 kb on + strand, within MPMX19_03371 at 746.777 kb on - strand, within MPMX19_03371 at 746.777 kb on - strand, within MPMX19_03371 at 746.777 kb on - strand, within MPMX19_03371 at 747.034 kb on - strand at 747.105 kb on + strand at 747.105 kb on + strand at 747.105 kb on + strand at 747.105 kb on + strand at 747.105 kb on + strand at 747.106 kb on - strand at 747.106 kb on - strand at 747.106 kb on - strand at 747.106 kb on - strand at 747.147 kb on + strand at 747.147 kb on + strand at 747.148 kb on - strand at 747.261 kb on + strand, within MPMX19_03372 at 747.261 kb on + strand, within MPMX19_03372 at 747.261 kb on + strand, within MPMX19_03372
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.3 remove 745,608 + MPMX19_03369 0.43 -0.0 745,609 - MPMX19_03369 0.43 -0.8 746,039 + -0.2 746,040 - +1.0 746,040 - +0.3 746,551 + -0.7 746,551 + -0.5 746,552 - +0.2 746,552 - -1.8 746,552 - -0.4 746,573 - MPMX19_03371 0.13 -0.3 746,737 + MPMX19_03371 0.56 -1.9 746,737 + MPMX19_03371 0.56 -1.8 746,737 + MPMX19_03371 0.56 -1.2 746,737 + MPMX19_03371 0.56 -1.6 746,738 - MPMX19_03371 0.56 -0.4 746,738 - MPMX19_03371 0.56 +0.5 746,738 - MPMX19_03371 0.56 -0.8 746,738 - MPMX19_03371 0.56 +0.3 746,776 + MPMX19_03371 0.66 -0.8 746,776 + MPMX19_03371 0.66 +1.2 746,777 - MPMX19_03371 0.66 +0.6 746,777 - MPMX19_03371 0.66 -2.0 746,777 - MPMX19_03371 0.66 -0.3 747,034 - -0.2 747,105 + -1.6 747,105 + +0.2 747,105 + +0.4 747,105 + -1.1 747,105 + -2.3 747,106 - -0.8 747,106 - +0.6 747,106 - -0.4 747,106 - +0.8 747,147 + +0.2 747,147 + +1.0 747,148 - -1.3 747,261 + MPMX19_03372 0.11 -0.4 747,261 + MPMX19_03372 0.11 -0.4 747,261 + MPMX19_03372 0.11 -1.6
Or see this region's nucleotide sequence