Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02870

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
115,160	-		MPMX19_02869	0.46	+0.8
115,578	+		MPMX19_02869	0.73	-1.4
115,578	+		MPMX19_02869	0.73	-1.8
115,578	+		MPMX19_02869	0.73	-0.2
115,578	+		MPMX19_02869	0.73	+0.1
115,579	-		MPMX19_02869	0.73	-0.1
115,579	-		MPMX19_02869	0.73	-0.6
115,579	-		MPMX19_02869	0.73	+0.3
115,623	+		MPMX19_02869	0.76	-0.0
115,623	+		MPMX19_02869	0.76	-0.5
115,623	+		MPMX19_02869	0.76	+0.8
115,624	-		MPMX19_02869	0.76	-1.4
115,624	-		MPMX19_02869	0.76	+0.1
115,624	-		MPMX19_02869	0.76	-0.5
115,624	-		MPMX19_02869	0.76	-1.1
115,624	-		MPMX19_02869	0.76	-1.4
115,624	-		MPMX19_02869	0.76	+0.0
115,680	+		MPMX19_02869	0.80	-1.5
115,732	-		MPMX19_02869	0.83	+0.3
115,732	-		MPMX19_02869	0.83	-0.6
115,750	+		MPMX19_02869	0.85	-1.8
115,751	-		MPMX19_02869	0.85	-0.3
115,931	-				+0.5
116,020	-				-0.2
116,020	-				+0.5
116,051	+				-0.2
116,051	+				-0.1
116,105	-				+0.6
116,119	-				+0.3
116,119	-				+0.1
116,357	+				-0.2
116,357	+				-1.4
116,358	-				-1.2
116,358	-				-0.5
116,358	-				-0.3
116,432	+				-1.2
116,433	-				-0.7
116,687	+		MPMX19_02870	0.14	-0.8
116,687	+		MPMX19_02870	0.14	-0.2
116,687	+		MPMX19_02870	0.14	-1.1
116,687	+		MPMX19_02870	0.14	-0.1
116,688	-		MPMX19_02870	0.14	-0.8
116,688	-		MPMX19_02870	0.14	-1.0
116,688	-		MPMX19_02870	0.14	-0.8
116,688	-		MPMX19_02870	0.14	-0.7
116,688	-		MPMX19_02870	0.14	+0.8
116,786	+		MPMX19_02870	0.16	-0.4
116,786	+		MPMX19_02870	0.16	-1.4
116,787	-		MPMX19_02870	0.16	+0.5
116,927	+		MPMX19_02870	0.19	-1.4
116,927	+		MPMX19_02870	0.19	-1.6
116,927	+		MPMX19_02870	0.19	-0.4
116,927	+		MPMX19_02870	0.19	-1.9
116,928	-		MPMX19_02870	0.19	-1.2
116,928	-		MPMX19_02870	0.19	-1.1
116,928	-		MPMX19_02870	0.19	-1.4
117,218	+		MPMX19_02870	0.25	+0.1
117,218	+		MPMX19_02870	0.25	-0.9
117,218	+		MPMX19_02870	0.25	+0.7
117,278	+		MPMX19_02870	0.26	-0.7
117,278	+		MPMX19_02870	0.26	-1.3
117,359	+		MPMX19_02870	0.27	-1.5
117,869	+		MPMX19_02870	0.37	-1.1
117,869	+		MPMX19_02870	0.37	-0.7
117,869	+		MPMX19_02870	0.37	-1.2
117,869	+		MPMX19_02870	0.37	-1.4
117,870	-		MPMX19_02870	0.37	+0.5
117,870	-		MPMX19_02870	0.37	-0.1
117,870	-		MPMX19_02870	0.37	-1.1
117,870	-		MPMX19_02870	0.37	-1.0
117,870	-		MPMX19_02870	0.37	-0.7
117,870	-		MPMX19_02870	0.37	-0.0
117,870	-		MPMX19_02870	0.37	+0.3
117,965	+		MPMX19_02870	0.39	-0.2
117,965	+		MPMX19_02870	0.39	-0.4
117,965	+		MPMX19_02870	0.39	-2.0
117,965	+		MPMX19_02870	0.39	-2.0
117,965	+		MPMX19_02870	0.39	+0.9
117,966	-		MPMX19_02870	0.39	-0.6
117,966	-		MPMX19_02870	0.39	+0.4
117,966	-		MPMX19_02870	0.39	-1.0
117,966	-		MPMX19_02870	0.39	-1.2
117,966	-		MPMX19_02870	0.39	-0.6
117,966	-		MPMX19_02870	0.39	-0.5
117,966	-		MPMX19_02870	0.39	-1.0
117,966	-		MPMX19_02870	0.39	-0.2
117,966	-		MPMX19_02870	0.39	-1.0
117,966	-		MPMX19_02870	0.39	-0.2
118,059	-		MPMX19_02870	0.41	+0.0
118,059	-		MPMX19_02870	0.41	+0.5
118,059	-		MPMX19_02870	0.41	-1.8
118,121	+		MPMX19_02870	0.42	+0.1
118,121	+		MPMX19_02870	0.42	+0.5
118,154	+		MPMX19_02870	0.43	+0.6
118,154	+		MPMX19_02870	0.43	-1.9
118,154	+		MPMX19_02870	0.43	+0.2
118,154	+		MPMX19_02870	0.43	-1.8
118,155	-		MPMX19_02870	0.43	-0.7
118,155	-		MPMX19_02870	0.43	+0.1
118,166	+		MPMX19_02870	0.43	-1.4
118,166	+		MPMX19_02870	0.43	-0.3
118,166	+		MPMX19_02870	0.43	-1.2
118,190	+		MPMX19_02870	0.44	-0.2
118,191	-		MPMX19_02870	0.44	-1.6
118,275	+		MPMX19_02870	0.45	-2.4
118,275	+		MPMX19_02870	0.45	-1.6
118,275	+		MPMX19_02870	0.45	-1.1
118,276	-		MPMX19_02870	0.45	-0.9
118,276	-		MPMX19_02870	0.45	-1.2
118,393	-		MPMX19_02870	0.48	+0.1
118,412	+		MPMX19_02870	0.48	-0.8
118,412	+		MPMX19_02870	0.48	-2.3
118,412	+		MPMX19_02870	0.48	-0.1
118,412	+		MPMX19_02870	0.48	-1.4
118,412	+		MPMX19_02870	0.48	+0.3
118,412	+		MPMX19_02870	0.48	-0.3
118,412	+		MPMX19_02870	0.48	-1.7
118,413	-		MPMX19_02870	0.48	-1.5
118,413	-		MPMX19_02870	0.48	-2.3
118,413	-		MPMX19_02870	0.48	+1.1
118,413	-		MPMX19_02870	0.48	-0.5
118,413	-		MPMX19_02870	0.48	-2.8
118,475	+		MPMX19_02870	0.49	+0.2
118,475	+		MPMX19_02870	0.49	+0.1
118,475	+		MPMX19_02870	0.49	+0.9
118,523	+		MPMX19_02870	0.50	-1.5
118,523	+		MPMX19_02870	0.50	+0.5
118,524	-		MPMX19_02870	0.50	-0.4
118,524	-		MPMX19_02870	0.50	-1.1
118,524	-		MPMX19_02870	0.50	+0.4
118,728	-		MPMX19_02870	0.54	-0.7
118,728	-		MPMX19_02870	0.54	-0.8
118,844	+		MPMX19_02870	0.57	+0.3
118,844	+		MPMX19_02870	0.57	+0.8
118,845	-		MPMX19_02870	0.57	+1.5
118,845	-		MPMX19_02870	0.57	-0.4
118,845	-		MPMX19_02870	0.57	-0.5
118,845	-		MPMX19_02870	0.57	-2.3
118,961	+		MPMX19_02870	0.59	-1.0
118,961	+		MPMX19_02870	0.59	-1.4
118,961	+		MPMX19_02870	0.59	-0.1
118,961	+		MPMX19_02870	0.59	-0.8
118,961	+		MPMX19_02870	0.59	-0.9
119,909	+		MPMX19_02870	0.78	+0.5
119,909	+		MPMX19_02870	0.78	+0.7
119,910	-		MPMX19_02870	0.78	-1.0
119,910	-		MPMX19_02870	0.78	-0.9
120,110	+		MPMX19_02870	0.82	-0.0
120,110	+		MPMX19_02870	0.82	+0.9
120,110	+		MPMX19_02870	0.82	+1.4
120,110	+		MPMX19_02870	0.82	-0.8
120,110	+		MPMX19_02870	0.82	-1.6
120,410	+		MPMX19_02870	0.88	-0.2
120,410	+		MPMX19_02870	0.88	-1.5
120,410	+		MPMX19_02870	0.88	-0.5
120,410	+		MPMX19_02870	0.88	-0.7
120,410	+		MPMX19_02870	0.88	+0.6
120,411	-		MPMX19_02870	0.88	+0.8
120,411	-		MPMX19_02870	0.88	-2.3
120,411	-		MPMX19_02870	0.88	-1.4
120,431	+		MPMX19_02870	0.88	+1.5
120,431	+		MPMX19_02870	0.88	-1.8
120,431	+		MPMX19_02870	0.88	+0.2
120,431	+		MPMX19_02870	0.88	-0.4
120,431	+		MPMX19_02870	0.88	+0.0
120,431	+		MPMX19_02870	0.88	-0.2
120,431	+		MPMX19_02870	0.88	+0.1
120,432	-		MPMX19_02870	0.88	-1.1
120,432	-		MPMX19_02870	0.88	-0.7
120,432	-		MPMX19_02870	0.88	+0.5
120,432	-		MPMX19_02870	0.88	+0.5
120,432	-		MPMX19_02870	0.88	+0.1
120,491	+		MPMX19_02870	0.89	+0.3
120,491	+		MPMX19_02870	0.89	-0.1
120,491	+		MPMX19_02870	0.89	+0.9
120,491	+		MPMX19_02870	0.89	-0.7
120,491	+		MPMX19_02870	0.89	-0.9
120,491	+		MPMX19_02870	0.89	-0.6
120,492	-		MPMX19_02870	0.89	-0.5
120,492	-		MPMX19_02870	0.89	-1.4
120,492	-		MPMX19_02870	0.89	-0.6
120,492	-		MPMX19_02870	0.89	-1.6
120,492	-		MPMX19_02870	0.89	-1.2
120,492	-		MPMX19_02870	0.89	-1.1
120,492	-		MPMX19_02870	0.89	-0.2
121,012	+				+0.8
121,013	-				+0.8
121,013	-				-0.1
121,013	-				+0.1
121,352	+		MPMX19_02871	0.25	-1.8
121,536	-		MPMX19_02871	0.44	-0.1
121,536	-		MPMX19_02871	0.44	-2.0
121,583	+		MPMX19_02871	0.49	-0.2
121,583	+		MPMX19_02871	0.49	-0.5
121,583	+		MPMX19_02871	0.49	+0.8
121,583	+		MPMX19_02871	0.49	-1.1
121,583	+		MPMX19_02871	0.49	-0.5
121,584	-		MPMX19_02871	0.49	+0.8
121,584	-		MPMX19_02871	0.49	-2.4
121,744	+		MPMX19_02871	0.66	+0.5
121,744	+		MPMX19_02871	0.66	-1.5
121,744	+		MPMX19_02871	0.66	-0.4
121,745	-		MPMX19_02871	0.66	+0.2
121,745	-		MPMX19_02871	0.66	-1.4
121,745	-		MPMX19_02871	0.66	+1.8
121,803	-		MPMX19_02871	0.72	-1.4