Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02814

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
49,691	+		MPMX19_02813	0.29	-0.2
49,691	+		MPMX19_02813	0.29	+0.2
49,691	+		MPMX19_02813	0.29	-1.7
49,691	+		MPMX19_02813	0.29	+0.0
49,691	+		MPMX19_02813	0.29	-1.1
49,691	+		MPMX19_02813	0.29	-0.0
49,691	+		MPMX19_02813	0.29	-0.4
49,692	-		MPMX19_02813	0.30	-1.3
49,692	-		MPMX19_02813	0.30	-1.1
49,692	-		MPMX19_02813	0.30	-0.7
49,692	-		MPMX19_02813	0.30	-0.1
49,692	-		MPMX19_02813	0.30	-0.2
49,692	-		MPMX19_02813	0.30	-0.2
49,692	-		MPMX19_02813	0.30	+0.1
49,692	-		MPMX19_02813	0.30	-0.7
49,692	-		MPMX19_02813	0.30	+0.7
49,692	-		MPMX19_02813	0.30	+0.1
49,778	+		MPMX19_02813	0.36	+0.9
49,778	+		MPMX19_02813	0.36	+0.1
49,778	+		MPMX19_02813	0.36	+0.8
49,778	+		MPMX19_02813	0.36	+0.5
49,778	+		MPMX19_02813	0.36	-0.1
49,778	+		MPMX19_02813	0.36	-0.9
49,778	+		MPMX19_02813	0.36	+0.8
49,778	+		MPMX19_02813	0.36	-0.4
49,778	+		MPMX19_02813	0.36	-0.9
49,778	+		MPMX19_02813	0.36	-0.7
49,778	+		MPMX19_02813	0.36	-0.1
49,779	-		MPMX19_02813	0.36	-0.7
49,779	-		MPMX19_02813	0.36	-0.1
49,779	-		MPMX19_02813	0.36	-0.2
49,779	-		MPMX19_02813	0.36	-0.3
49,779	-		MPMX19_02813	0.36	-1.0
49,779	-		MPMX19_02813	0.36	-0.6
49,779	-		MPMX19_02813	0.36	-1.8
49,779	-		MPMX19_02813	0.36	+0.5
49,781	+		MPMX19_02813	0.36	-1.2
49,781	+		MPMX19_02813	0.36	-1.9
49,781	+		MPMX19_02813	0.36	-0.5
49,781	+		MPMX19_02813	0.36	-0.6
49,781	+		MPMX19_02813	0.36	-0.8
49,781	+		MPMX19_02813	0.36	-0.5
49,781	+		MPMX19_02813	0.36	+0.1
49,781	+		MPMX19_02813	0.36	+0.1
49,781	+		MPMX19_02813	0.36	-2.4
49,781	+		MPMX19_02813	0.36	-1.3
49,781	+		MPMX19_02813	0.36	-0.7
49,781	+		MPMX19_02813	0.36	+0.5
49,782	-		MPMX19_02813	0.36	-0.4
49,782	-		MPMX19_02813	0.36	+0.0
49,782	-		MPMX19_02813	0.36	-0.9
49,782	-		MPMX19_02813	0.36	-1.0
49,782	-		MPMX19_02813	0.36	-0.4
49,782	-		MPMX19_02813	0.36	-2.7
49,782	-		MPMX19_02813	0.36	-0.4
49,782	-		MPMX19_02813	0.36	+0.4
49,782	-		MPMX19_02813	0.36	-1.7
49,782	-		MPMX19_02813	0.36	-0.2
49,811	+		MPMX19_02813	0.38	+0.6
49,811	+		MPMX19_02813	0.38	+0.4
49,811	+		MPMX19_02813	0.38	+1.1
49,811	+		MPMX19_02813	0.38	+0.7
49,811	+		MPMX19_02813	0.38	-0.5
49,812	-		MPMX19_02813	0.38	+1.7
49,812	-		MPMX19_02813	0.38	-1.5
49,925	+		MPMX19_02813	0.46	+0.5
49,925	+		MPMX19_02813	0.46	-1.5
49,925	+		MPMX19_02813	0.46	-0.5
49,925	+		MPMX19_02813	0.46	-1.2
49,925	+		MPMX19_02813	0.46	-1.2
49,926	-		MPMX19_02813	0.46	-0.2
50,069	+		MPMX19_02813	0.56	-0.2
50,069	+		MPMX19_02813	0.56	-3.1
50,069	+		MPMX19_02813	0.56	+0.2
50,069	+		MPMX19_02813	0.56	-0.1
50,069	+		MPMX19_02813	0.56	+0.4
50,069	+		MPMX19_02813	0.56	+0.8
50,069	+		MPMX19_02813	0.56	-1.8
50,069	+		MPMX19_02813	0.56	-1.8
50,069	+		MPMX19_02813	0.56	-1.1
50,069	+		MPMX19_02813	0.56	-0.3
50,070	-		MPMX19_02813	0.56	+0.5
50,070	-		MPMX19_02813	0.56	+0.4
50,070	-		MPMX19_02813	0.56	-1.8
50,070	-		MPMX19_02813	0.56	-1.4
50,070	-		MPMX19_02813	0.56	+1.3
50,132	+		MPMX19_02813	0.61	+0.5
50,132	+		MPMX19_02813	0.61	+0.5
50,132	+		MPMX19_02813	0.61	-1.5
50,132	+		MPMX19_02813	0.61	+0.0
50,132	+		MPMX19_02813	0.61	+0.6
50,133	-		MPMX19_02813	0.61	-1.0
50,133	-		MPMX19_02813	0.61	+0.8
50,133	-		MPMX19_02813	0.61	+0.5
50,133	-		MPMX19_02813	0.61	-0.4
50,133	-		MPMX19_02813	0.61	-1.6
50,133	-		MPMX19_02813	0.61	-0.8
50,159	+		MPMX19_02813	0.62	-0.7
50,294	+		MPMX19_02813	0.72	-0.5
50,294	+		MPMX19_02813	0.72	+1.5
50,294	+		MPMX19_02813	0.72	-1.1
50,294	+		MPMX19_02813	0.72	+0.7
50,295	-		MPMX19_02813	0.72	-0.5
50,546	+		MPMX19_02813	0.90	-0.0
50,546	+		MPMX19_02813	0.90	-0.9
50,546	+		MPMX19_02813	0.90	-1.5
50,546	+		MPMX19_02813	0.90	-0.5
50,546	+		MPMX19_02813	0.90	-0.3
50,546	+		MPMX19_02813	0.90	-0.7
50,547	-		MPMX19_02813	0.90	-0.2
50,547	-		MPMX19_02813	0.90	+0.8
50,564	+				-2.4
50,582	+				-1.2
50,582	+				-0.8
50,582	+				-0.2
50,582	+				-0.7
50,582	+				-2.1
50,582	+				+0.9
50,582	+				-1.4
50,582	+				-2.0
50,582	+				-1.1
50,582	+				-0.2
50,582	+				-1.9
50,582	+				+0.2
50,582	+				+0.0
50,582	+				-0.2
50,582	+				-0.1
50,582	+				+1.0
50,583	-				+0.4
50,583	-				-1.1
50,583	-				-1.5
50,583	-				+1.4
50,583	-				-1.9
50,583	-				-0.8
50,583	-				-1.1
50,583	-				-0.1
50,583	-				-1.5
50,583	-				+0.7
50,583	-				-0.8
50,583	-				-0.9
50,583	-				+0.5
50,583	-				-0.5
50,583	-				-0.5
50,583	-				-0.2
50,583	-				-1.1
50,828	-		MPMX19_02814	0.11	-0.2
50,828	-		MPMX19_02814	0.11	-1.4
50,828	-		MPMX19_02814	0.11	-1.5
50,828	-		MPMX19_02814	0.11	+0.1
50,828	-		MPMX19_02814	0.11	+0.1
50,828	-		MPMX19_02814	0.11	-0.6
50,828	-		MPMX19_02814	0.11	+1.1
50,828	-		MPMX19_02814	0.11	-0.2
50,828	-		MPMX19_02814	0.11	+0.5
50,944	+		MPMX19_02814	0.20	-1.0
50,944	+		MPMX19_02814	0.20	+0.2
50,944	+		MPMX19_02814	0.20	-0.4
50,945	-		MPMX19_02814	0.20	-1.7
50,945	-		MPMX19_02814	0.20	-1.5
50,945	-		MPMX19_02814	0.20	-0.7
51,070	+		MPMX19_02814	0.30	-1.8
51,070	+		MPMX19_02814	0.30	+0.8
51,071	-		MPMX19_02814	0.30	-1.1
51,071	-		MPMX19_02814	0.30	-0.5
51,071	-		MPMX19_02814	0.30	+0.7
51,071	-		MPMX19_02814	0.30	-1.9
51,071	-		MPMX19_02814	0.30	-0.6
51,375	+		MPMX19_02814	0.54	-0.5
51,375	+		MPMX19_02814	0.54	-1.1
51,375	+		MPMX19_02814	0.54	-0.4
51,375	+		MPMX19_02814	0.54	-1.4
51,375	+		MPMX19_02814	0.54	-0.3
51,375	+		MPMX19_02814	0.54	-0.2
51,375	+		MPMX19_02814	0.54	-0.1
51,375	+		MPMX19_02814	0.54	-1.1
51,375	+		MPMX19_02814	0.54	-1.6
51,375	+		MPMX19_02814	0.54	+0.1
51,376	-		MPMX19_02814	0.54	-0.2
51,376	-		MPMX19_02814	0.54	-0.1
51,376	-		MPMX19_02814	0.54	-0.2
51,376	-		MPMX19_02814	0.54	-2.1
51,376	-		MPMX19_02814	0.54	+0.1
51,376	-		MPMX19_02814	0.54	-1.5
51,376	-		MPMX19_02814	0.54	+0.1
51,376	-		MPMX19_02814	0.54	-0.2
51,376	-		MPMX19_02814	0.54	-1.1
51,376	-		MPMX19_02814	0.54	-1.8
51,376	-		MPMX19_02814	0.54	-1.2
51,376	-		MPMX19_02814	0.54	-0.5
51,376	-		MPMX19_02814	0.54	-0.2
51,376	-		MPMX19_02814	0.54	-0.9
51,418	+		MPMX19_02814	0.58	-0.6
51,418	+		MPMX19_02814	0.58	+1.1
51,419	-		MPMX19_02814	0.58	-0.6
51,419	-		MPMX19_02814	0.58	-0.1
51,446	-		MPMX19_02814	0.60	+0.1
51,613	+		MPMX19_02814	0.73	-2.4
51,613	+		MPMX19_02814	0.73	-1.7
51,613	+		MPMX19_02814	0.73	+0.3
51,613	+		MPMX19_02814	0.73	+0.8
51,613	+		MPMX19_02814	0.73	-1.0
51,614	-		MPMX19_02814	0.73	-0.2
51,614	-		MPMX19_02814	0.73	+1.6
51,614	-		MPMX19_02814	0.73	-1.8
51,797	-		MPMX19_02814	0.87	-0.7
51,797	-		MPMX19_02814	0.87	-1.1
51,797	-		MPMX19_02814	0.87	-1.9
51,844	+				-1.0
51,845	-				-1.3
51,895	+				-0.7
51,895	+				-0.5
51,895	+				-1.2
51,895	+				+0.7
51,895	+				-0.3
51,895	+				-0.8
51,895	+				-0.1
51,896	-				-1.4
51,896	-				-0.2
51,896	-				+0.5
51,896	-				-1.2
51,916	+				-1.2
51,916	+				-0.9
51,916	+				-0.6
51,916	+				-2.3
51,916	+				+1.3
51,916	+				-0.9
51,917	-				-0.7
51,917	-				-0.1
52,149	-		MPMX19_02815	0.16	-0.1
52,328	+		MPMX19_02815	0.39	-0.2
52,329	-		MPMX19_02815	0.39	-0.7
52,329	-		MPMX19_02815	0.39	-0.2
52,329	-		MPMX19_02815	0.39	-1.1
52,446	-		MPMX19_02815	0.55	-0.2