Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02778

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
9,767	+		MPMX19_02777	0.12	+0.7
9,767	+		MPMX19_02777	0.12	-0.6
9,767	+		MPMX19_02777	0.12	-1.4
9,767	+		MPMX19_02777	0.12	+0.8
9,767	+		MPMX19_02777	0.12	+0.1
9,767	+		MPMX19_02777	0.12	-0.9
9,767	+		MPMX19_02777	0.12	-0.7
9,768	-		MPMX19_02777	0.12	+0.5
9,768	-		MPMX19_02777	0.12	-0.5
9,768	-		MPMX19_02777	0.12	+0.6
9,768	-		MPMX19_02777	0.12	-0.7
9,768	-		MPMX19_02777	0.12	+1.1
9,768	-		MPMX19_02777	0.12	-1.1
9,768	-		MPMX19_02777	0.12	+0.3
9,875	+		MPMX19_02777	0.23	+1.0
9,875	+		MPMX19_02777	0.23	-0.5
9,875	+		MPMX19_02777	0.23	-0.5
9,875	+		MPMX19_02777	0.23	+0.1
9,876	-		MPMX19_02777	0.23	+0.8
9,876	-		MPMX19_02777	0.23	-1.7
9,876	-		MPMX19_02777	0.23	-0.9
9,876	-		MPMX19_02777	0.23	-0.0
9,891	-		MPMX19_02777	0.24	-0.2
10,016	+		MPMX19_02777	0.36	-2.5
10,016	+		MPMX19_02777	0.36	+0.6
10,017	-		MPMX19_02777	0.36	+1.1
10,017	-		MPMX19_02777	0.36	-1.7
10,017	-		MPMX19_02777	0.36	+3.1
10,017	-		MPMX19_02777	0.36	+0.5
10,055	+		MPMX19_02777	0.40	+1.4
10,055	+		MPMX19_02777	0.40	+1.7
10,055	+		MPMX19_02777	0.40	-0.0
10,055	+		MPMX19_02777	0.40	-1.2
10,056	-		MPMX19_02777	0.40	-0.6
10,056	-		MPMX19_02777	0.40	+0.5
10,056	-		MPMX19_02777	0.40	-1.2
10,056	-		MPMX19_02777	0.40	-0.2
10,056	-		MPMX19_02777	0.40	-0.7
10,163	+		MPMX19_02777	0.50	-0.9
10,164	-		MPMX19_02777	0.50	+1.4
10,166	+		MPMX19_02777	0.50	-0.8
10,166	+		MPMX19_02777	0.50	-0.3
10,166	+		MPMX19_02777	0.50	-0.7
10,166	+		MPMX19_02777	0.50	-0.5
10,166	+		MPMX19_02777	0.50	-0.7
10,166	+		MPMX19_02777	0.50	-0.1
10,166	+		MPMX19_02777	0.50	+0.6
10,166	+		MPMX19_02777	0.50	-0.4
10,166	+		MPMX19_02777	0.50	+1.9
10,166	+		MPMX19_02777	0.50	+1.1
10,167	-		MPMX19_02777	0.50	-1.5
10,167	-		MPMX19_02777	0.50	+0.1
10,167	-		MPMX19_02777	0.50	+0.2
10,167	-		MPMX19_02777	0.50	-0.1
10,167	-		MPMX19_02777	0.50	+0.4
10,167	-		MPMX19_02777	0.50	-2.1
10,167	-		MPMX19_02777	0.50	-0.1
10,167	-		MPMX19_02777	0.50	-1.1
10,167	-		MPMX19_02777	0.50	+0.6
10,226	+		MPMX19_02777	0.56	+1.4
10,226	+		MPMX19_02777	0.56	+0.8
10,226	+		MPMX19_02777	0.56	-0.4
10,226	+		MPMX19_02777	0.56	+0.1
10,226	+		MPMX19_02777	0.56	-0.3
10,226	+		MPMX19_02777	0.56	-1.1
10,226	+		MPMX19_02777	0.56	+0.5
10,226	+		MPMX19_02777	0.56	-0.4
10,227	-		MPMX19_02777	0.56	-1.1
10,227	-		MPMX19_02777	0.56	+0.8
10,227	-		MPMX19_02777	0.56	+0.2
10,227	-		MPMX19_02777	0.56	+0.5
10,227	-		MPMX19_02777	0.56	+0.5
10,227	-		MPMX19_02777	0.56	+0.1
10,230	-		MPMX19_02777	0.56	+0.9
10,376	+		MPMX19_02777	0.70	-0.7
10,376	+		MPMX19_02777	0.70	-1.2
10,376	+		MPMX19_02777	0.70	+0.7
10,376	+		MPMX19_02777	0.70	-0.6
10,376	+		MPMX19_02777	0.70	-1.1
10,376	+		MPMX19_02777	0.70	+0.5
10,377	-		MPMX19_02777	0.70	+0.1
10,377	-		MPMX19_02777	0.70	-1.9
10,377	-		MPMX19_02777	0.70	+0.4
10,377	-		MPMX19_02777	0.70	+0.4
10,377	-		MPMX19_02777	0.70	+0.0
10,377	-		MPMX19_02777	0.70	+0.3
10,377	-		MPMX19_02777	0.70	+1.1
11,155	+		MPMX19_02778	0.61	+0.1
11,155	+		MPMX19_02778	0.61	+0.8
11,156	-		MPMX19_02778	0.61	+1.3
11,170	+		MPMX19_02778	0.63	-2.0
11,170	+		MPMX19_02778	0.63	+1.1
11,171	-		MPMX19_02778	0.63	+0.3
11,171	-		MPMX19_02778	0.63	-0.2
11,216	+		MPMX19_02778	0.69	+0.5
11,437	+				+0.8
11,437	+				-0.7
11,437	+				-1.4
11,437	+				-2.1
11,437	+				+0.3
11,437	+				-1.4
11,437	+				-0.9
11,437	+				-1.1
11,437	+				+0.2
11,437	+				-0.1
11,437	+				-1.5
11,438	-				+0.7
11,438	-				-0.2
11,438	-				+0.1
11,438	-				-1.5
11,471	-				+0.5
11,471	-				-0.5
11,471	-				-0.6
11,471	-				-0.2
11,631	+		MPMX19_02779	0.24	+0.5
11,631	+		MPMX19_02779	0.24	-1.3
11,631	+		MPMX19_02779	0.24	-1.0
11,631	+		MPMX19_02779	0.24	+0.3
11,631	+		MPMX19_02779	0.24	-1.2
11,632	-		MPMX19_02779	0.25	+0.3
11,632	-		MPMX19_02779	0.25	+0.5
11,632	-		MPMX19_02779	0.25	-0.7
12,157	-				+0.0
12,157	-				-0.7
12,157	-				+0.4
12,157	-				+0.5
12,157	-				+1.4
12,280	+		MPMX19_02780	0.13	-0.5
12,280	+		MPMX19_02780	0.13	-0.5
12,281	-		MPMX19_02780	0.13	-1.1
12,281	-		MPMX19_02780	0.13	+0.3
12,281	-		MPMX19_02780	0.13	-0.7
12,281	-		MPMX19_02780	0.13	-1.6
12,342	+		MPMX19_02780	0.26	-0.7
12,343	-		MPMX19_02780	0.26	-1.2
12,438	+		MPMX19_02780	0.46	-0.4
12,439	-		MPMX19_02780	0.47	-0.0
12,439	-		MPMX19_02780	0.47	+1.1