Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02682

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
2,800,394	+				+0.4
2,800,394	+				-0.7
2,800,394	+				-1.3
2,800,394	+				-0.3
2,800,394	+				-0.5
2,800,394	+				-1.6
2,800,394	+				+0.3
2,800,395	-				-1.5
2,800,395	-				-1.1
2,800,395	-				+0.0
2,800,395	-				-1.2
2,800,395	-				-1.7
2,800,395	-				-0.1
2,800,395	-				-0.6
2,800,395	-				-1.8
2,800,395	-				-2.6
2,800,527	+				-0.2
2,800,527	+				+0.7
2,800,527	+				-1.7
2,800,527	+				-1.4
2,800,527	+				-1.1
2,800,527	+				-1.1
2,800,527	+				-0.5
2,800,527	+				-1.0
2,800,527	+				-0.7
2,800,528	-				-0.3
2,800,528	-				-0.9
2,800,528	-				-0.9
2,800,528	-				-0.2
2,800,528	-				-1.0
2,800,528	-				+0.8
2,800,528	-				-0.2
2,800,528	-				-1.3
2,800,528	-				-2.4
2,800,528	-				-0.5
2,800,539	+				+0.3
2,800,540	-				-1.7
2,800,540	-				-0.3
2,800,540	-				+1.3
2,800,540	-				-1.2
2,800,660	+		MPMX19_02681	0.24	-2.1
2,800,660	+		MPMX19_02681	0.24	+2.5
2,800,660	+		MPMX19_02681	0.24	-1.0
2,800,660	+		MPMX19_02681	0.24	-0.5
2,800,728	+		MPMX19_02681	0.33	-0.3
2,800,728	+		MPMX19_02681	0.33	-0.3
2,800,728	+		MPMX19_02681	0.33	+0.3
2,800,728	+		MPMX19_02681	0.33	-0.1
2,800,728	+		MPMX19_02681	0.33	-1.4
2,800,728	+		MPMX19_02681	0.33	-0.5
2,800,728	+		MPMX19_02681	0.33	+0.4
2,800,728	+		MPMX19_02681	0.33	+0.3
2,800,728	+		MPMX19_02681	0.33	-1.1
2,800,728	+		MPMX19_02681	0.33	-0.7
2,800,728	+		MPMX19_02681	0.33	-1.3
2,800,728	+		MPMX19_02681	0.33	-0.6
2,800,728	+		MPMX19_02681	0.33	-2.1
2,800,728	+		MPMX19_02681	0.33	-1.3
2,800,728	+		MPMX19_02681	0.33	+1.5
2,800,728	+		MPMX19_02681	0.33	-0.9
2,800,728	+		MPMX19_02681	0.33	-0.8
2,800,728	+		MPMX19_02681	0.33	-0.6
2,800,728	+		MPMX19_02681	0.33	+0.4
2,800,729	-		MPMX19_02681	0.33	-2.3
2,800,729	-		MPMX19_02681	0.33	-1.3
2,800,729	-		MPMX19_02681	0.33	-0.0
2,800,729	-		MPMX19_02681	0.33	-0.6
2,800,729	-		MPMX19_02681	0.33	-1.7
2,800,729	-		MPMX19_02681	0.33	+0.9
2,800,729	-		MPMX19_02681	0.33	-1.7
2,800,729	-		MPMX19_02681	0.33	-1.1
2,800,729	-		MPMX19_02681	0.33	-1.7
2,800,729	-		MPMX19_02681	0.33	+0.3
2,800,729	-		MPMX19_02681	0.33	+0.0
2,800,729	-		MPMX19_02681	0.33	-1.1
2,800,729	-		MPMX19_02681	0.33	-0.3
2,800,729	-		MPMX19_02681	0.33	-1.2
2,800,729	-		MPMX19_02681	0.33	-1.2
2,800,740	+		MPMX19_02681	0.35	-0.8
2,800,740	+		MPMX19_02681	0.35	+0.9
2,800,740	+		MPMX19_02681	0.35	-0.9
2,800,740	+		MPMX19_02681	0.35	+0.5
2,800,740	+		MPMX19_02681	0.35	+0.0
2,800,740	+		MPMX19_02681	0.35	+0.0
2,800,740	+		MPMX19_02681	0.35	-0.1
2,800,740	+		MPMX19_02681	0.35	+0.5
2,800,740	+		MPMX19_02681	0.35	-0.8
2,800,740	+		MPMX19_02681	0.35	-0.5
2,800,740	+		MPMX19_02681	0.35	-0.7
2,800,740	+		MPMX19_02681	0.35	+0.9
2,800,740	+		MPMX19_02681	0.35	-1.5
2,800,740	+		MPMX19_02681	0.35	-1.4
2,800,740	+		MPMX19_02681	0.35	-0.3
2,800,740	+		MPMX19_02681	0.35	-0.9
2,800,740	+		MPMX19_02681	0.35	-1.5
2,800,741	-		MPMX19_02681	0.35	+0.7
2,800,741	-		MPMX19_02681	0.35	+0.5
2,800,741	-		MPMX19_02681	0.35	+0.9
2,800,741	-		MPMX19_02681	0.35	-0.5
2,800,741	-		MPMX19_02681	0.35	-0.9
2,800,741	-		MPMX19_02681	0.35	-1.2
2,800,741	-		MPMX19_02681	0.35	-0.9
2,800,741	-		MPMX19_02681	0.35	+0.1
2,800,741	-		MPMX19_02681	0.35	+1.7
2,800,741	-		MPMX19_02681	0.35	+0.2
2,800,749	+		MPMX19_02681	0.36	+1.3
2,800,749	+		MPMX19_02681	0.36	-0.8
2,800,749	+		MPMX19_02681	0.36	-1.4
2,800,750	-		MPMX19_02681	0.36	-1.3
2,800,750	-		MPMX19_02681	0.36	+0.4
2,800,750	-		MPMX19_02681	0.36	+1.5
2,800,833	+		MPMX19_02681	0.47	-0.7
2,800,833	+		MPMX19_02681	0.47	+0.0
2,800,833	+		MPMX19_02681	0.47	+1.1
2,800,833	+		MPMX19_02681	0.47	-0.8
2,800,833	+		MPMX19_02681	0.47	+0.5
2,800,833	+		MPMX19_02681	0.47	-0.9
2,800,833	+		MPMX19_02681	0.47	-1.2
2,800,834	-		MPMX19_02681	0.47	+0.0
2,800,834	-		MPMX19_02681	0.47	-0.5
2,800,834	-		MPMX19_02681	0.47	+0.7
2,800,834	-		MPMX19_02681	0.47	-0.5
2,800,834	-		MPMX19_02681	0.47	-0.3
2,800,834	-		MPMX19_02681	0.47	-0.9
2,800,834	-		MPMX19_02681	0.47	-0.8
2,800,834	-		MPMX19_02681	0.47	+0.9
2,800,834	-		MPMX19_02681	0.47	+0.7
2,800,918	-		MPMX19_02681	0.58	-1.2
2,800,923	+		MPMX19_02681	0.58	+0.5
2,800,923	+		MPMX19_02681	0.58	-0.1
2,800,923	+		MPMX19_02681	0.58	+0.1
2,800,923	+		MPMX19_02681	0.58	-3.2
2,800,923	+		MPMX19_02681	0.58	-0.2
2,800,923	+		MPMX19_02681	0.58	-0.7
2,800,923	+		MPMX19_02681	0.58	-0.6
2,800,923	+		MPMX19_02681	0.58	-1.9
2,800,923	+		MPMX19_02681	0.58	-0.9
2,800,923	+		MPMX19_02681	0.58	-0.9
2,800,980	-		MPMX19_02681	0.66	+1.1
2,801,005	-		MPMX19_02681	0.69	+0.7
2,801,020	-		MPMX19_02681	0.71	+1.5
2,801,020	-		MPMX19_02681	0.71	-1.0
2,801,020	-		MPMX19_02681	0.71	-1.8
2,801,020	-		MPMX19_02681	0.71	+0.4
2,801,100	+		MPMX19_02681	0.81	-2.3
2,801,100	+		MPMX19_02681	0.81	-0.1
2,801,100	+		MPMX19_02681	0.81	-1.3
2,801,100	+		MPMX19_02681	0.81	+0.5
2,801,100	+		MPMX19_02681	0.81	+0.6
2,801,100	+		MPMX19_02681	0.81	-0.9
2,801,101	-		MPMX19_02681	0.82	-0.2
2,801,101	-		MPMX19_02681	0.82	-0.6
2,801,101	-		MPMX19_02681	0.82	-2.3
2,801,101	-		MPMX19_02681	0.82	-0.1
2,801,101	-		MPMX19_02681	0.82	-0.5
2,801,282	-				+0.2
2,801,282	-				-0.8
2,801,282	-				+0.1
2,801,282	-				-1.0
2,801,282	-				-0.7
2,801,282	-				-0.3
2,801,282	-				-3.0
2,801,282	-				+0.1
2,801,282	-				-0.1
2,801,282	-				-2.4
2,801,374	+		MPMX19_02682	0.24	-0.2
2,801,374	+		MPMX19_02682	0.24	+0.9
2,801,374	+		MPMX19_02682	0.24	-0.6
2,801,374	+		MPMX19_02682	0.24	-0.6
2,801,374	+		MPMX19_02682	0.24	-1.1
2,801,374	+		MPMX19_02682	0.24	+0.1
2,801,374	+		MPMX19_02682	0.24	-1.0
2,801,374	+		MPMX19_02682	0.24	-1.1
2,801,374	+		MPMX19_02682	0.24	-0.6
2,801,374	+		MPMX19_02682	0.24	-0.1
2,801,374	+		MPMX19_02682	0.24	+0.5
2,801,374	+		MPMX19_02682	0.24	-0.2
2,801,374	+		MPMX19_02682	0.24	-0.6
2,801,374	+		MPMX19_02682	0.24	-1.3
2,801,374	+		MPMX19_02682	0.24	-2.1
2,801,374	+		MPMX19_02682	0.24	+0.7
2,801,374	+		MPMX19_02682	0.24	-0.2
2,801,374	+		MPMX19_02682	0.24	+0.8
2,801,374	+		MPMX19_02682	0.24	+0.6
2,801,374	+		MPMX19_02682	0.24	-0.5
2,801,374	+		MPMX19_02682	0.24	+0.8
2,801,374	+		MPMX19_02682	0.24	+0.1
2,801,374	+		MPMX19_02682	0.24	-0.4
2,801,374	+		MPMX19_02682	0.24	-1.6
2,801,374	+		MPMX19_02682	0.24	-0.1
2,801,374	+		MPMX19_02682	0.24	-0.3
2,801,375	-		MPMX19_02682	0.24	+0.1
2,801,375	-		MPMX19_02682	0.24	-1.6
2,801,375	-		MPMX19_02682	0.24	-0.7
2,801,375	-		MPMX19_02682	0.24	-0.2
2,801,375	-		MPMX19_02682	0.24	-0.1
2,801,375	-		MPMX19_02682	0.24	-1.0
2,801,375	-		MPMX19_02682	0.24	-0.6
2,801,375	-		MPMX19_02682	0.24	+0.7
2,801,375	-		MPMX19_02682	0.24	+1.3
2,801,375	-		MPMX19_02682	0.24	-1.8
2,801,375	-		MPMX19_02682	0.24	-0.7
2,801,375	-		MPMX19_02682	0.24	+0.7
2,801,375	-		MPMX19_02682	0.24	+0.7
2,801,375	-		MPMX19_02682	0.24	+0.7
2,801,375	-		MPMX19_02682	0.24	-1.1
2,801,375	-		MPMX19_02682	0.24	+1.5
2,801,375	-		MPMX19_02682	0.24	-0.1
2,801,375	-		MPMX19_02682	0.24	-1.3
2,801,375	-		MPMX19_02682	0.24	-0.7
2,801,375	-		MPMX19_02682	0.24	+1.9
2,801,375	-		MPMX19_02682	0.24	-0.8
2,801,375	-		MPMX19_02682	0.24	-1.9
2,801,375	-		MPMX19_02682	0.24	-0.9
2,801,375	-		MPMX19_02682	0.24	+0.5
2,801,375	-		MPMX19_02682	0.24	-0.1
2,801,375	-		MPMX19_02682	0.24	+1.7
2,801,375	-		MPMX19_02682	0.24	+0.6
2,801,375	-		MPMX19_02682	0.24	-0.3
2,801,375	-		MPMX19_02682	0.24	+0.1
2,801,626	+		MPMX19_02682	0.77	-0.2
2,801,626	+		MPMX19_02682	0.77	-0.8
2,801,626	+		MPMX19_02682	0.77	+0.8
2,801,756	+				+1.0
2,801,756	+				+0.0
2,801,756	+				-1.5
2,801,756	+				+0.3
2,801,756	+				-0.1
2,801,756	+				-1.4
2,801,756	+				+0.1
2,801,756	+				+0.2
2,801,756	+				-0.7
2,801,756	+				-0.4
2,801,756	+				-0.3
2,801,756	+				+0.3
2,801,757	-				-0.9
2,801,757	-				-0.8
2,801,757	-				+0.5
2,801,757	-				-1.4
2,801,757	-				+1.3
2,801,757	-				-0.0
2,801,757	-				-1.4
2,801,757	-				-0.1
2,801,757	-				+0.1
2,801,757	-				-0.7
2,801,926	-				-0.7
2,802,057	-				+0.3
2,802,070	+				-1.0
2,802,070	+				-0.4
2,802,071	-				+0.3
2,802,071	-				+1.3
2,802,071	-				-0.5
2,802,126	+				+0.3
2,802,126	+				-0.1
2,802,126	+				-1.1
2,802,126	+				-1.2
2,802,126	+				+0.5
2,802,126	+				-1.9
2,802,126	+				-1.7
2,802,126	+				-0.5
2,802,126	+				+0.2
2,802,127	-				-0.1
2,802,127	-				-0.8
2,802,127	-				+0.9
2,802,127	-				-0.1
2,802,127	-				-2.4
2,802,127	-				-2.4
2,802,127	-				-2.2
2,802,127	-				-0.9
2,802,127	-				+0.7
2,802,127	-				+0.1
2,802,127	-				-1.1
2,802,127	-				-1.6
2,802,127	-				-0.1
2,802,127	-				-1.0
2,802,153	+				-0.7
2,802,162	-				+0.5
2,802,162	-				-1.1
2,802,222	+				+0.3
2,802,222	+				-0.1
2,802,222	+				-0.7
2,802,223	-				-2.0
2,802,259	+				-0.5
2,802,260	-				+1.0
2,802,260	-				-0.2
2,802,309	+				-0.3
2,802,310	-				+0.3
2,802,310	-				-0.5
2,802,314	+				+0.9
2,802,314	+				-0.9
2,802,314	+				-0.3
2,802,314	+				-0.3
2,802,314	+				-1.6
2,802,314	+				+0.8
2,802,314	+				-1.1
2,802,314	+				-1.2
2,802,314	+				-0.1
2,802,314	+				-0.5
2,802,314	+				+1.8
2,802,314	+				-1.8
2,802,314	+				-0.1
2,802,314	+				-0.5
2,802,314	+				-0.9
2,802,314	+				-0.6
2,802,314	+				-0.5
2,802,314	+				-0.9
2,802,314	+				-1.4
2,802,314	+				+1.9
2,802,314	+				-1.6
2,802,315	-				-1.2
2,802,315	-				-1.1
2,802,315	-				+1.5
2,802,315	-				-0.8
2,802,315	-				+1.8
2,802,315	-				-3.6
2,802,315	-				+0.7
2,802,315	-				-0.6
2,802,315	-				+0.9
2,802,315	-				+0.5
2,802,315	-				+1.5
2,802,315	-				+0.1
2,802,378	+				-0.2
2,802,378	+				-1.2
2,802,378	+				-0.4
2,802,378	+				-0.3
2,802,378	+				+0.3
2,802,378	+				-2.0
2,802,378	+				+1.5
2,802,378	+				-1.9
2,802,378	+				-0.2
2,802,378	+				-0.4
2,802,378	+				-2.1
2,802,379	-				-0.1
2,802,379	-				-1.8
2,802,379	-				+0.9
2,802,379	-				-0.8
2,802,379	-				-1.3
2,802,379	-				-2.2
2,802,379	-				+0.6
2,802,379	-				-1.3
2,802,379	-				-0.8
2,802,379	-				+0.5
2,802,379	-				+1.3
2,802,379	-				+0.0
2,802,379	-				+0.7
2,802,379	-				+0.9
2,802,379	-				-0.8
2,802,452	+		MPMX19_02683	0.23	-0.9
2,802,452	+		MPMX19_02683	0.23	-0.5
2,802,452	+		MPMX19_02683	0.23	-0.3
2,802,452	+		MPMX19_02683	0.23	-1.3
2,802,452	+		MPMX19_02683	0.23	+1.0
2,802,452	+		MPMX19_02683	0.23	-0.9
2,802,452	+		MPMX19_02683	0.23	+0.3
2,802,452	+		MPMX19_02683	0.23	-0.4
2,802,452	+		MPMX19_02683	0.23	-0.3
2,802,452	+		MPMX19_02683	0.23	+0.0
2,802,453	-		MPMX19_02683	0.23	-0.1
2,802,453	-		MPMX19_02683	0.23	-0.4
2,802,453	-		MPMX19_02683	0.23	+1.7
2,802,453	-		MPMX19_02683	0.23	-0.2
2,802,453	-		MPMX19_02683	0.23	+0.3
2,802,453	-		MPMX19_02683	0.23	-0.3
2,802,453	-		MPMX19_02683	0.23	-0.8
2,802,453	-		MPMX19_02683	0.23	-1.1
2,802,454	+		MPMX19_02683	0.23	-1.8
2,802,455	-		MPMX19_02683	0.23	-0.3
2,802,455	-		MPMX19_02683	0.23	-0.1
2,802,455	-		MPMX19_02683	0.23	-0.7
2,802,518	+		MPMX19_02683	0.42	+0.1
2,802,518	+		MPMX19_02683	0.42	+0.9
2,802,518	+		MPMX19_02683	0.42	-1.1
2,802,518	+		MPMX19_02683	0.42	-0.3
2,802,518	+		MPMX19_02683	0.42	-0.5
2,802,518	+		MPMX19_02683	0.42	+0.9
2,802,518	+		MPMX19_02683	0.42	-0.8
2,802,518	+		MPMX19_02683	0.42	-1.7
2,802,518	+		MPMX19_02683	0.42	-1.9
2,802,519	-		MPMX19_02683	0.43	+1.1
2,802,519	-		MPMX19_02683	0.43	-0.5
2,802,519	-		MPMX19_02683	0.43	-1.8
2,802,519	-		MPMX19_02683	0.43	-1.1
2,802,519	-		MPMX19_02683	0.43	-1.2
2,802,520	-		MPMX19_02683	0.43	-0.9
2,802,631	+		MPMX19_02683	0.76	-0.4
2,802,648	+		MPMX19_02683	0.81	-1.1
2,802,648	+		MPMX19_02683	0.81	-0.1
2,802,648	+		MPMX19_02683	0.81	-1.7
2,802,648	+		MPMX19_02683	0.81	+0.5
2,802,648	+		MPMX19_02683	0.81	-0.5
2,802,648	+		MPMX19_02683	0.81	-0.2
2,802,648	+		MPMX19_02683	0.81	-1.5
2,802,648	+		MPMX19_02683	0.81	-1.4
2,802,648	+		MPMX19_02683	0.81	+0.9
2,802,648	+		MPMX19_02683	0.81	-1.5
2,802,648	+		MPMX19_02683	0.81	+0.1
2,802,648	+		MPMX19_02683	0.81	-2.4
2,802,648	+		MPMX19_02683	0.81	+0.1
2,802,648	+		MPMX19_02683	0.81	-0.3
2,802,648	+		MPMX19_02683	0.81	-0.4
2,802,648	+		MPMX19_02683	0.81	-0.5
2,802,648	+		MPMX19_02683	0.81	-1.1
2,802,648	+		MPMX19_02683	0.81	-0.1
2,802,648	+		MPMX19_02683	0.81	+0.3
2,802,648	+		MPMX19_02683	0.81	+0.6
2,802,648	+		MPMX19_02683	0.81	-1.0
2,802,648	+		MPMX19_02683	0.81	-0.4
2,802,648	+		MPMX19_02683	0.81	+0.5
2,802,648	+		MPMX19_02683	0.81	+0.2
2,802,648	+		MPMX19_02683	0.81	-1.2
2,802,648	+		MPMX19_02683	0.81	-0.5
2,802,648	+		MPMX19_02683	0.81	+0.8
2,802,648	+		MPMX19_02683	0.81	-0.5
2,802,648	+		MPMX19_02683	0.81	-1.1
2,802,648	+		MPMX19_02683	0.81	+0.5
2,802,648	+		MPMX19_02683	0.81	-0.7
2,802,648	+		MPMX19_02683	0.81	+0.8
2,802,648	+		MPMX19_02683	0.81	-0.5
2,802,649	-		MPMX19_02683	0.82	-1.2
2,802,649	-		MPMX19_02683	0.82	-0.3
2,802,649	-		MPMX19_02683	0.82	-1.7
2,802,649	-		MPMX19_02683	0.82	-1.6
2,802,649	-		MPMX19_02683	0.82	+0.3
2,802,649	-		MPMX19_02683	0.82	-0.1
2,802,649	-		MPMX19_02683	0.82	-1.8
2,802,649	-		MPMX19_02683	0.82	-1.2
2,802,649	-		MPMX19_02683	0.82	-1.6
2,802,649	-		MPMX19_02683	0.82	+0.9
2,802,649	-		MPMX19_02683	0.82	-0.3
2,802,649	-		MPMX19_02683	0.82	-0.1
2,802,649	-		MPMX19_02683	0.82	+0.5
2,802,649	-		MPMX19_02683	0.82	-0.6
2,802,649	-		MPMX19_02683	0.82	+1.4
2,802,649	-		MPMX19_02683	0.82	-1.3
2,802,649	-		MPMX19_02683	0.82	-1.4
2,802,649	-		MPMX19_02683	0.82	-0.4
2,802,649	-		MPMX19_02683	0.82	-1.3
2,802,649	-		MPMX19_02683	0.82	+1.4
2,802,649	-		MPMX19_02683	0.82	-0.1
2,802,649	-		MPMX19_02683	0.82	-0.3
2,802,649	-		MPMX19_02683	0.82	-0.1
2,802,649	-		MPMX19_02683	0.82	-1.2
2,802,649	-		MPMX19_02683	0.82	-0.9
2,802,649	-		MPMX19_02683	0.82	+0.7