Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02579

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
2,694,999	-		MPMX19_02578	0.67	+0.3
2,694,999	-		MPMX19_02578	0.67	-1.0
2,695,013	+		MPMX19_02578	0.68	-2.2
2,695,013	+		MPMX19_02578	0.68	+0.2
2,695,014	-		MPMX19_02578	0.68	-1.9
2,695,014	-		MPMX19_02578	0.68	-1.0
2,695,014	-		MPMX19_02578	0.68	-0.5
2,695,014	-		MPMX19_02578	0.68	-0.1
2,695,160	+		MPMX19_02578	0.74	-0.3
2,695,160	+		MPMX19_02578	0.74	+0.2
2,695,160	+		MPMX19_02578	0.74	-0.3
2,695,160	+		MPMX19_02578	0.74	+0.3
2,695,161	-		MPMX19_02578	0.74	-0.6
2,695,161	-		MPMX19_02578	0.74	-0.7
2,695,161	-		MPMX19_02578	0.74	+0.5
2,695,161	-		MPMX19_02578	0.74	-0.7
2,695,161	-		MPMX19_02578	0.74	+0.1
2,695,457	+		MPMX19_02578	0.88	-0.1
2,695,457	+		MPMX19_02578	0.88	-0.1
2,695,457	+		MPMX19_02578	0.88	-0.8
2,695,457	+		MPMX19_02578	0.88	-0.6
2,695,457	+		MPMX19_02578	0.88	-0.1
2,695,458	-		MPMX19_02578	0.88	-1.3
2,695,458	-		MPMX19_02578	0.88	+0.3
2,695,458	-		MPMX19_02578	0.88	-2.3
2,695,458	-		MPMX19_02578	0.88	+0.1
2,695,458	-		MPMX19_02578	0.88	+0.9
2,695,493	+		MPMX19_02578	0.89	-0.9
2,695,493	+		MPMX19_02578	0.89	+0.5
2,695,493	+		MPMX19_02578	0.89	+0.3
2,695,493	+		MPMX19_02578	0.89	-0.2
2,695,493	+		MPMX19_02578	0.89	+0.4
2,695,493	+		MPMX19_02578	0.89	-2.3
2,695,493	+		MPMX19_02578	0.89	-0.4
2,695,493	+		MPMX19_02578	0.89	+0.5
2,695,493	+		MPMX19_02578	0.89	-0.4
2,695,493	+		MPMX19_02578	0.89	-0.6
2,695,493	+		MPMX19_02578	0.89	-1.5
2,695,493	+		MPMX19_02578	0.89	+0.6
2,695,493	+		MPMX19_02578	0.89	+0.2
2,695,494	-		MPMX19_02578	0.89	-2.4
2,695,494	-		MPMX19_02578	0.89	-0.9
2,695,494	-		MPMX19_02578	0.89	-1.0
2,695,494	-		MPMX19_02578	0.89	+0.1
2,695,494	-		MPMX19_02578	0.89	+0.3
2,695,494	-		MPMX19_02578	0.89	+0.6
2,695,494	-		MPMX19_02578	0.89	-1.1
2,695,494	-		MPMX19_02578	0.89	+0.5
2,695,494	-		MPMX19_02578	0.89	-0.1
2,695,494	-		MPMX19_02578	0.89	+0.1
2,695,494	-		MPMX19_02578	0.89	-0.4
2,695,494	-		MPMX19_02578	0.89	+1.0
2,695,514	+				-0.4
2,695,514	+				+1.7
2,695,514	+				-2.5
2,695,514	+				+0.7
2,695,515	-				-0.6
2,695,515	-				-0.4
2,695,515	-				-2.1
2,695,515	-				+1.1
2,695,515	-				+0.5
2,695,515	-				+0.9
2,695,746	+				-0.7
2,695,746	+				+0.4
2,695,746	+				-1.3
2,695,746	+				-0.8
2,695,746	+				-0.9
2,695,746	+				-0.8
2,695,746	+				-1.3
2,695,746	+				-1.9
2,695,746	+				-0.1
2,695,746	+				+0.6
2,695,746	+				-0.5
2,695,746	+				+0.3
2,695,746	+				-0.7
2,695,746	+				-0.7
2,695,747	-				-1.2
2,695,747	-				-0.3
2,695,747	-				-0.7
2,695,747	-				+0.7
2,695,747	-				+0.5
2,695,747	-				-0.6
2,695,747	-				-0.2
2,695,747	-				-1.2
2,695,747	-				-0.9
2,695,747	-				+0.6
2,695,747	-				-0.5
2,695,747	-				-0.8
2,695,747	-				-0.1
2,695,808	+				-1.1
2,695,808	+				+0.3
2,695,808	+				-1.2
2,695,808	+				-0.7
2,695,808	+				-0.3
2,695,808	+				+0.5
2,695,808	+				+0.5
2,695,808	+				-0.4
2,695,808	+				+0.2
2,695,808	+				+1.2
2,695,808	+				+0.7
2,695,808	+				-0.4
2,695,808	+				+1.3
2,695,808	+				-1.3
2,695,808	+				-2.0
2,695,809	-				-0.2
2,695,809	-				-1.7
2,695,809	-				-0.6
2,695,809	-				+1.9
2,695,809	-				-0.9
2,695,809	-				+1.0
2,695,809	-				+0.3
2,695,809	-				-1.4
2,695,809	-				-1.2
2,695,809	-				-1.8
2,695,809	-				+0.4
2,695,809	-				-0.1
2,695,809	-				-1.5
2,695,810	+				-0.7
2,695,810	+				-1.2
2,695,810	+				+0.2
2,695,810	+				-1.7
2,695,810	+				-0.9
2,695,810	+				+0.1
2,695,810	+				-1.1
2,695,810	+				-0.3
2,695,810	+				-0.1
2,695,810	+				+0.1
2,695,810	+				-1.8
2,695,810	+				-0.3
2,695,810	+				-0.9
2,695,810	+				-0.9
2,695,810	+				-0.1
2,695,810	+				+0.3
2,695,810	+				-0.4
2,695,810	+				-0.3
2,695,810	+				-0.5
2,695,810	+				-1.1
2,695,811	-				-1.0
2,695,811	-				-0.4
2,695,811	-				-0.5
2,695,811	-				-1.2
2,695,811	-				-0.7
2,695,811	-				-0.4
2,695,811	-				-0.7
2,695,811	-				-0.8
2,695,811	-				+0.5
2,695,811	-				+0.9
2,695,811	-				-0.6
2,695,811	-				-1.8
2,695,811	-				-1.4
2,695,811	-				+0.0
2,695,811	-				-1.6
2,695,811	-				-0.5
2,695,811	-				-0.3
2,695,811	-				-0.2
2,695,815	+				-0.6
2,695,815	+				-1.1
2,695,815	+				+0.7
2,695,816	-				+1.1
2,695,816	-				-1.3
2,695,816	-				-0.7
2,695,816	-				-1.2
2,695,929	+		MPMX19_02579	0.32	+0.5
2,695,930	-		MPMX19_02579	0.33	+0.3
2,695,930	-		MPMX19_02579	0.33	+0.3
2,695,930	-		MPMX19_02579	0.33	-1.0
2,695,930	-		MPMX19_02579	0.33	+1.0
2,695,930	-		MPMX19_02579	0.33	+0.3
2,695,930	-		MPMX19_02579	0.33	-1.3
2,696,101	+				-1.1
2,696,101	+				+0.1
2,696,101	+				-0.2
2,696,101	+				-1.3
2,696,101	+				-0.9
2,696,101	+				-0.1
2,696,101	+				-0.8
2,696,101	+				-1.4
2,696,101	+				-1.6
2,696,101	+				-0.2
2,696,101	+				-1.1
2,696,101	+				-0.5
2,696,102	-				-0.4
2,696,102	-				+0.7
2,696,102	-				-0.3
2,696,102	-				-0.2
2,696,102	-				-1.3
2,696,102	-				+1.1
2,696,102	-				-0.1
2,696,102	-				-0.3
2,696,102	-				-0.7
2,696,102	-				+0.7
2,696,102	-				+0.5
2,696,102	-				-0.3
2,696,102	-				-0.7
2,696,102	-				-0.5
2,696,130	+				-0.3
2,696,130	+				-1.6
2,696,130	+				-0.8
2,696,130	+				-0.7
2,696,130	+				-1.1
2,696,130	+				-1.1
2,696,131	-				-0.3
2,696,131	-				-1.1
2,696,131	-				-1.2
2,696,131	-				-0.7
2,696,131	-				+1.5
2,696,131	-				-0.7
2,696,131	-				-1.2
2,696,131	-				+0.3
2,696,131	-				-1.4
2,696,131	-				+0.4
2,696,141	+				+1.5
2,696,141	+				-0.5
2,696,142	-				-1.3
2,696,244	+				+1.1
2,696,244	+				-0.5
2,696,244	+				-0.1
2,696,244	+				+0.7
2,696,244	+				-0.4
2,696,244	+				-1.2
2,696,245	-				-1.4
2,696,295	+				-0.7
2,696,295	+				+0.3
2,696,295	+				-2.4
2,696,295	+				+0.1
2,696,295	+				-2.3
2,696,295	+				-1.2
2,696,295	+				-1.3
2,696,295	+				+1.3
2,696,296	-				+0.5
2,696,296	-				+0.3
2,696,296	-				-1.5
2,696,296	-				+0.3
2,696,296	-				+0.4
2,696,296	-				-0.7
2,696,296	-				-1.1
2,696,296	-				-0.4
2,696,296	-				+0.1
2,696,305	+				-0.8
2,696,305	+				-0.3
2,696,305	+				-0.3
2,696,305	+				+0.0
2,696,305	+				+0.1
2,696,305	+				-1.1
2,696,305	+				-0.5
2,696,305	+				-1.2
2,696,305	+				+0.7
2,696,305	+				-1.2
2,696,305	+				-0.5
2,696,305	+				+0.5
2,696,306	-				+0.3
2,696,306	-				-0.3
2,696,306	-				-1.8
2,696,306	-				-0.2
2,696,306	-				-1.4
2,696,306	-				-0.1
2,696,306	-				-1.1
2,696,306	-				-0.7
2,696,306	-				-0.5
2,696,306	-				+0.7
2,696,306	-				-0.5
2,696,306	-				-0.3
2,696,306	-				-3.0
2,696,306	-				-1.3
2,696,338	+				-1.5
2,696,338	+				-1.0
2,696,338	+				+0.1
2,696,338	+				-1.1
2,696,338	+				+0.8
2,696,338	+				-1.4
2,696,338	+				-1.6
2,696,338	+				-1.5
2,696,339	-				-2.5
2,696,339	-				-0.8
2,696,339	-				-0.5
2,696,339	-				-0.8
2,696,360	+				-0.5
2,696,360	+				-2.0
2,696,360	+				+1.0
2,696,360	+				-0.2
2,696,361	-				-1.8
2,696,361	-				+0.5
2,696,361	-				+0.8
2,696,361	-				-1.1
2,696,361	-				-0.1
2,696,368	+				-0.3
2,696,368	+				-1.7
2,696,368	+				-0.2
2,696,368	+				+0.8
2,696,368	+				-0.5
2,696,368	+				-0.2
2,696,368	+				-1.1
2,696,368	+				-1.4
2,696,368	+				-0.7
2,696,368	+				+0.5
2,696,368	+				-0.9
2,696,368	+				-1.7
2,696,368	+				-0.2
2,696,368	+				-0.1
2,696,368	+				-1.3
2,696,368	+				-0.8
2,696,368	+				-0.5
2,696,369	-				-1.8
2,696,369	-				+0.1
2,696,369	-				-0.1
2,696,369	-				-0.6
2,696,369	-				+0.4
2,696,369	-				-1.9
2,696,369	-				-1.2
2,696,369	-				-0.3
2,696,369	-				-0.9
2,696,369	-				+0.1
2,696,369	-				-1.3
2,696,369	-				-1.0
2,696,369	-				-1.3
2,696,369	-				+0.7
2,696,369	-				+0.9
2,696,369	-				-0.4
2,696,369	-				+2.0
2,696,369	-				+0.1
2,696,369	-				-0.7
2,696,369	-				-2.5
2,696,369	-				-1.3
2,696,369	-				-0.1
2,696,369	-				-0.2
2,696,420	-				-0.2
2,696,420	-				+1.3
2,696,420	-				-1.2
2,696,420	-				-2.1
2,696,420	-				-0.2
2,696,420	-				-1.4
2,696,420	-				-3.1
2,696,540	+				-0.7
2,696,540	+				-0.5
2,696,541	-				-0.3
2,696,541	-				-0.0
2,696,547	+				-0.7
2,696,547	+				-1.0
2,696,547	+				-0.0
2,696,547	+				-1.0
2,696,547	+				+1.0
2,696,547	+				+0.3
2,696,547	+				-0.5
2,696,547	+				-1.4
2,696,547	+				+0.0
2,696,547	+				-0.7
2,696,547	+				-0.3
2,696,547	+				-1.2
2,696,547	+				+1.3
2,696,547	+				-0.4
2,696,547	+				-0.0
2,696,547	+				-0.4
2,696,547	+				-1.6
2,696,547	+				-0.0
2,696,547	+				-2.2
2,696,547	+				-0.3
2,696,547	+				-0.3
2,696,547	+				-0.5
2,696,547	+				+1.3
2,696,547	+				+0.9
2,696,547	+				-1.9
2,696,547	+				-0.2
2,696,547	+				+0.7
2,696,548	-				-0.4
2,696,548	-				+0.3
2,696,548	-				-3.3
2,696,548	-				-2.0
2,696,548	-				-1.2
2,696,548	-				-0.7
2,696,548	-				-1.4
2,696,548	-				-0.2
2,696,548	-				-0.7
2,696,548	-				-1.2
2,696,548	-				-0.6
2,696,548	-				+0.6
2,696,548	-				-0.4
2,696,548	-				+0.5
2,696,548	-				-0.0
2,696,548	-				-2.3
2,696,548	-				+0.3
2,696,548	-				-1.2
2,696,548	-				-1.3
2,696,548	-				-0.9
2,696,548	-				-0.4
2,696,548	-				-0.2
2,696,548	-				-0.4
2,696,550	+				-2.3
2,696,550	+				-0.4
2,696,551	-				+1.5
2,696,584	+				-0.6
2,696,584	+				-0.5
2,696,584	+				-1.7
2,696,584	+				-1.8
2,696,584	+				-0.7
2,696,584	+				-0.8
2,696,584	+				-0.0
2,696,584	+				+0.7
2,696,585	-				+1.1
2,696,585	-				-1.4
2,696,585	-				-0.8
2,696,585	-				+0.0
2,696,585	-				-1.6
2,696,585	-				-1.2
2,696,585	-				-0.6
2,696,585	-				-1.8
2,696,585	-				+0.1
2,696,585	-				-1.1
2,696,671	+		MPMX19_02580	0.18	-1.3
2,696,671	+		MPMX19_02580	0.18	-1.2
2,696,671	+		MPMX19_02580	0.18	-0.7
2,696,671	+		MPMX19_02580	0.18	-0.2
2,696,672	-		MPMX19_02580	0.19	-0.6
2,696,672	-		MPMX19_02580	0.19	-0.3
2,696,672	-		MPMX19_02580	0.19	+0.3
2,696,672	-		MPMX19_02580	0.19	+0.3
2,696,672	-		MPMX19_02580	0.19	-1.0
2,696,672	-		MPMX19_02580	0.19	-0.4