Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02500

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
2,617,487	+				+1.8
2,617,487	+				-0.2
2,617,487	+				-0.7
2,617,487	+				-0.4
2,617,488	-				-1.3
2,617,488	-				-2.5
2,617,488	-				+0.2
2,617,537	+		MPMX19_02499	0.15	-0.3
2,617,537	+		MPMX19_02499	0.15	-1.2
2,617,538	-		MPMX19_02499	0.15	+0.5
2,617,538	-		MPMX19_02499	0.15	-0.6
2,617,661	+		MPMX19_02499	0.29	-1.4
2,617,661	+		MPMX19_02499	0.29	-1.5
2,618,198	+		MPMX19_02499	0.90	-0.1
2,618,198	+		MPMX19_02499	0.90	-0.8
2,618,198	+		MPMX19_02499	0.90	-0.6
2,618,198	+		MPMX19_02499	0.90	-0.1
2,618,198	+		MPMX19_02499	0.90	+0.2
2,618,198	+		MPMX19_02499	0.90	-0.9
2,618,199	-		MPMX19_02499	0.90	-1.2
2,618,199	-		MPMX19_02499	0.90	+2.2
2,618,199	-		MPMX19_02499	0.90	+0.4
2,618,199	-		MPMX19_02499	0.90	-0.1
2,618,199	-		MPMX19_02499	0.90	-0.5
2,618,199	-		MPMX19_02499	0.90	-0.1
2,618,465	+		MPMX19_02500	0.13	+0.5
2,618,465	+		MPMX19_02500	0.13	-1.1
2,618,465	+		MPMX19_02500	0.13	-1.5
2,618,465	+		MPMX19_02500	0.13	+0.7
2,618,465	+		MPMX19_02500	0.13	+0.1
2,618,466	-		MPMX19_02500	0.13	-0.1
2,618,466	-		MPMX19_02500	0.13	-0.6
2,618,466	-		MPMX19_02500	0.13	-0.5
2,618,466	-		MPMX19_02500	0.13	-0.8
2,618,793	+		MPMX19_02500	0.64	-0.1
2,618,793	+		MPMX19_02500	0.64	-0.9
2,618,793	+		MPMX19_02500	0.64	+0.2
2,618,794	-		MPMX19_02500	0.65	-1.5
2,618,794	-		MPMX19_02500	0.65	-1.8
2,618,794	-		MPMX19_02500	0.65	-1.8
2,618,794	-		MPMX19_02500	0.65	-0.2
2,618,794	-		MPMX19_02500	0.65	+1.2
2,618,795	-		MPMX19_02500	0.65	+0.1
2,618,930	+		MPMX19_02500	0.86	-0.5
2,618,930	+		MPMX19_02500	0.86	-0.5
2,618,930	+		MPMX19_02500	0.86	-0.6
2,618,930	+		MPMX19_02500	0.86	-1.9
2,618,931	-		MPMX19_02500	0.86	+0.7
2,618,931	-		MPMX19_02500	0.86	-1.3
2,618,942	+		MPMX19_02500	0.88	-1.2
2,618,942	+		MPMX19_02500	0.88	-1.2
2,618,942	+		MPMX19_02500	0.88	-0.5
2,618,942	+		MPMX19_02500	0.88	+0.7
2,618,942	+		MPMX19_02500	0.88	+0.7
2,618,942	+		MPMX19_02500	0.88	-1.1
2,618,942	+		MPMX19_02500	0.88	+0.1
2,618,942	+		MPMX19_02500	0.88	-1.1
2,618,943	-		MPMX19_02500	0.88	-0.4
2,618,943	-		MPMX19_02500	0.88	-0.1
2,618,943	-		MPMX19_02500	0.88	-1.5
2,618,943	-		MPMX19_02500	0.88	+0.1
2,618,943	-		MPMX19_02500	0.88	+1.5
2,618,943	-		MPMX19_02500	0.88	-0.1
2,618,943	-		MPMX19_02500	0.88	-1.6
2,618,943	-		MPMX19_02500	0.88	-0.1
2,618,943	-		MPMX19_02500	0.88	+0.2
2,619,031	-				+0.4
2,619,031	-				+0.5
2,619,211	+				+1.4
2,619,242	+				+0.3
2,619,243	-				-1.1
2,619,243	-				-0.9
2,619,243	-				-0.1
2,619,243	-				+0.2
2,619,243	-				-2.5
2,619,243	-				-0.2
2,619,243	-				-1.7
2,619,243	-				-3.5
2,619,330	+				-1.5
2,619,330	+				-1.9
2,619,331	-				+0.1
2,619,331	-				+0.2
2,619,331	-				-0.6
2,619,338	+				-0.6
2,619,338	+				-0.6
2,619,338	+				-0.6
2,619,339	-				-0.5
2,619,339	-				-0.3
2,619,339	-				-1.4
2,619,351	+				+0.4
2,619,351	+				+0.2
2,619,351	+				+0.8
2,619,351	+				-1.2
2,619,351	+				-1.5
2,619,351	+				-1.5
2,619,351	+				-0.0
2,619,352	-				-0.2
2,619,352	-				-0.9
2,619,352	-				+0.2
2,619,352	-				-0.4
2,619,352	-				-1.6
2,619,352	-				-1.1
2,619,757	-		MPMX19_02501	0.85	+0.9
2,619,828	+				-1.2
2,619,828	+				+0.3
2,619,828	+				+0.7
2,619,828	+				-0.9
2,619,829	-				+0.9
2,619,829	-				+0.5
2,619,829	-				+1.0
2,619,829	-				+0.4
2,619,829	-				+0.7
2,619,871	+				-0.3
2,619,871	+				+1.7
2,619,871	+				-1.2
2,619,872	-				-0.8
2,619,872	-				+1.2
2,619,872	-				-0.3
2,619,872	-				+0.7
2,619,872	-				+0.9
2,619,872	-				-0.2