Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02424

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
2,543,828	+		MPMX19_02423	0.15	-1.5
2,543,828	+		MPMX19_02423	0.15	-1.3
2,543,828	+		MPMX19_02423	0.15	-1.1
2,543,828	+		MPMX19_02423	0.15	+0.4
2,543,828	+		MPMX19_02423	0.15	-0.4
2,543,828	+		MPMX19_02423	0.15	-1.5
2,543,828	+		MPMX19_02423	0.15	-2.5
2,543,828	+		MPMX19_02423	0.15	-1.1
2,543,828	+		MPMX19_02423	0.15	+0.3
2,543,828	+		MPMX19_02423	0.15	+0.7
2,543,828	+		MPMX19_02423	0.15	+0.7
2,543,828	+		MPMX19_02423	0.15	-0.3
2,543,828	+		MPMX19_02423	0.15	-0.1
2,543,828	+		MPMX19_02423	0.15	-0.7
2,543,828	+		MPMX19_02423	0.15	+0.9
2,543,828	+		MPMX19_02423	0.15	+0.7
2,543,828	+		MPMX19_02423	0.15	-1.6
2,543,828	+		MPMX19_02423	0.15	+2.0
2,543,828	+		MPMX19_02423	0.15	-0.4
2,543,828	+		MPMX19_02423	0.15	-0.6
2,543,829	-		MPMX19_02423	0.15	-0.6
2,543,829	-		MPMX19_02423	0.15	+0.6
2,543,829	-		MPMX19_02423	0.15	+0.4
2,543,829	-		MPMX19_02423	0.15	-0.9
2,543,829	-		MPMX19_02423	0.15	-1.0
2,543,829	-		MPMX19_02423	0.15	-0.9
2,543,829	-		MPMX19_02423	0.15	-1.3
2,543,829	-		MPMX19_02423	0.15	-1.5
2,543,829	-		MPMX19_02423	0.15	-0.9
2,543,829	-		MPMX19_02423	0.15	-0.9
2,543,829	-		MPMX19_02423	0.15	-0.1
2,543,829	-		MPMX19_02423	0.15	-0.5
2,543,829	-		MPMX19_02423	0.15	-1.9
2,543,829	-		MPMX19_02423	0.15	+0.8
2,543,829	-		MPMX19_02423	0.15	+1.2
2,543,829	-		MPMX19_02423	0.15	-0.5
2,543,829	-		MPMX19_02423	0.15	-1.1
2,543,829	-		MPMX19_02423	0.15	+0.9
2,543,829	-		MPMX19_02423	0.15	+0.9
2,543,829	-		MPMX19_02423	0.15	-0.0
2,543,829	-		MPMX19_02423	0.15	-1.0
2,543,972	+		MPMX19_02423	0.30	-0.1
2,543,972	+		MPMX19_02423	0.30	-1.2
2,543,972	+		MPMX19_02423	0.30	-0.5
2,543,972	+		MPMX19_02423	0.30	-0.3
2,543,973	-		MPMX19_02423	0.30	-0.5
2,543,973	-		MPMX19_02423	0.30	-1.7
2,543,973	-		MPMX19_02423	0.30	+0.1
2,544,002	+		MPMX19_02423	0.34	-0.2
2,544,002	+		MPMX19_02423	0.34	-0.9
2,544,002	+		MPMX19_02423	0.34	-0.8
2,544,002	+		MPMX19_02423	0.34	-0.9
2,544,002	+		MPMX19_02423	0.34	-0.8
2,544,002	+		MPMX19_02423	0.34	-2.1
2,544,002	+		MPMX19_02423	0.34	-1.0
2,544,002	+		MPMX19_02423	0.34	-0.3
2,544,002	+		MPMX19_02423	0.34	-0.4
2,544,002	+		MPMX19_02423	0.34	-0.6
2,544,002	+		MPMX19_02423	0.34	-1.3
2,544,002	+		MPMX19_02423	0.34	-0.7
2,544,002	+		MPMX19_02423	0.34	-0.6
2,544,002	+		MPMX19_02423	0.34	-0.9
2,544,002	+		MPMX19_02423	0.34	+0.5
2,544,002	+		MPMX19_02423	0.34	-0.8
2,544,002	+		MPMX19_02423	0.34	-0.2
2,544,002	+		MPMX19_02423	0.34	-1.2
2,544,002	+		MPMX19_02423	0.34	+0.9
2,544,002	+		MPMX19_02423	0.34	-0.5
2,544,002	+		MPMX19_02423	0.34	+0.8
2,544,002	+		MPMX19_02423	0.34	-0.8
2,544,003	-		MPMX19_02423	0.34	+0.7
2,544,003	-		MPMX19_02423	0.34	-0.8
2,544,003	-		MPMX19_02423	0.34	+2.0
2,544,003	-		MPMX19_02423	0.34	-0.9
2,544,003	-		MPMX19_02423	0.34	-0.3
2,544,003	-		MPMX19_02423	0.34	-0.9
2,544,003	-		MPMX19_02423	0.34	-2.8
2,544,003	-		MPMX19_02423	0.34	-0.3
2,544,003	-		MPMX19_02423	0.34	-1.5
2,544,003	-		MPMX19_02423	0.34	-0.8
2,544,380	+		MPMX19_02423	0.75	-0.8
2,544,380	+		MPMX19_02423	0.75	-0.7
2,544,380	+		MPMX19_02423	0.75	+0.0
2,544,380	+		MPMX19_02423	0.75	+0.4
2,544,380	+		MPMX19_02423	0.75	-0.8
2,544,380	+		MPMX19_02423	0.75	+0.2
2,544,380	+		MPMX19_02423	0.75	-0.3
2,544,380	+		MPMX19_02423	0.75	+0.9
2,544,380	+		MPMX19_02423	0.75	-1.1
2,544,380	+		MPMX19_02423	0.75	-1.1
2,544,380	+		MPMX19_02423	0.75	-0.2
2,544,380	+		MPMX19_02423	0.75	-0.8
2,544,380	+		MPMX19_02423	0.75	-0.3
2,544,380	+		MPMX19_02423	0.75	-0.3
2,544,381	-		MPMX19_02423	0.75	-1.1
2,544,381	-		MPMX19_02423	0.75	-0.9
2,544,381	-		MPMX19_02423	0.75	+1.1
2,544,381	-		MPMX19_02423	0.75	+0.3
2,544,381	-		MPMX19_02423	0.75	-1.1
2,544,381	-		MPMX19_02423	0.75	+0.4
2,544,381	-		MPMX19_02423	0.75	-0.6
2,544,381	-		MPMX19_02423	0.75	-0.8
2,544,381	-		MPMX19_02423	0.75	+1.4
2,544,381	-		MPMX19_02423	0.75	-0.6
2,544,381	-		MPMX19_02423	0.75	-1.5
2,544,381	-		MPMX19_02423	0.75	-0.7
2,544,381	-		MPMX19_02423	0.75	-0.9
2,544,381	-		MPMX19_02423	0.75	-0.1
2,544,381	-		MPMX19_02423	0.75	-1.3
2,544,381	-		MPMX19_02423	0.75	-0.2
2,544,395	+		MPMX19_02423	0.76	+0.1
2,544,446	+		MPMX19_02423	0.82	-0.8
2,544,446	+		MPMX19_02423	0.82	-0.5
2,544,446	+		MPMX19_02423	0.82	-0.6
2,544,446	+		MPMX19_02423	0.82	+0.1
2,544,446	+		MPMX19_02423	0.82	+0.7
2,544,446	+		MPMX19_02423	0.82	+0.1
2,544,446	+		MPMX19_02423	0.82	-1.8
2,544,447	-		MPMX19_02423	0.82	+2.2
2,544,447	-		MPMX19_02423	0.82	-0.9
2,544,447	-		MPMX19_02423	0.82	-0.4
2,544,447	-		MPMX19_02423	0.82	-0.3
2,544,447	-		MPMX19_02423	0.82	+1.2
2,544,447	-		MPMX19_02423	0.82	-0.8
2,544,447	-		MPMX19_02423	0.82	+0.4
2,544,447	-		MPMX19_02423	0.82	-0.1
2,544,447	-		MPMX19_02423	0.82	-0.3
2,544,447	-		MPMX19_02423	0.82	-1.8
2,544,467	+		MPMX19_02423	0.84	-0.9
2,544,467	+		MPMX19_02423	0.84	-1.9
2,544,467	+		MPMX19_02423	0.84	-0.3
2,544,468	-		MPMX19_02423	0.84	-0.7
2,544,468	-		MPMX19_02423	0.84	+0.3
2,544,515	+		MPMX19_02423	0.89	-0.1
2,544,515	+		MPMX19_02423	0.89	-0.7
2,544,515	+		MPMX19_02423	0.89	-0.7
2,544,515	+		MPMX19_02423	0.89	+0.2
2,544,515	+		MPMX19_02423	0.89	-1.3
2,544,515	+		MPMX19_02423	0.89	+1.5
2,544,515	+		MPMX19_02423	0.89	-0.3
2,544,516	-		MPMX19_02423	0.89	+0.2
2,544,516	-		MPMX19_02423	0.89	-1.4
2,544,516	-		MPMX19_02423	0.89	-1.5
2,544,531	-				+0.7
2,544,611	+				-0.4
2,544,611	+				-1.3
2,544,611	+				-0.1
2,544,611	+				-0.3
2,544,611	+				-0.9
2,544,611	+				+0.2
2,544,611	+				+0.0
2,544,611	+				-1.8
2,544,612	-				-0.5
2,544,612	-				-1.1
2,544,612	-				-0.2
2,544,612	-				-0.8
2,544,612	-				-1.3
2,544,612	-				-1.2
2,544,612	-				-0.6
2,544,612	-				+0.2
2,544,612	-				-1.7
2,544,612	-				-0.8
2,544,625	+				+0.0
2,544,625	+				-0.8
2,544,626	-				+0.1
2,544,753	+				-1.9
2,544,753	+				-0.9
2,544,753	+				-0.7
2,544,753	+				-0.1
2,544,753	+				+0.4
2,544,753	+				-0.8
2,544,754	-				+0.4
2,545,023	+		MPMX19_02424	0.30	+0.7
2,545,023	+		MPMX19_02424	0.30	+0.7
2,545,047	+		MPMX19_02424	0.33	+2.2
2,545,047	+		MPMX19_02424	0.33	+2.2
2,545,047	+		MPMX19_02424	0.33	+2.2
2,545,047	+		MPMX19_02424	0.33	+0.2
2,545,047	+		MPMX19_02424	0.33	-0.1
2,545,047	+		MPMX19_02424	0.33	+0.4
2,545,047	+		MPMX19_02424	0.33	-0.3
2,545,047	+		MPMX19_02424	0.33	+1.2
2,545,047	+		MPMX19_02424	0.33	+1.2
2,545,047	+		MPMX19_02424	0.33	-0.1
2,545,048	-		MPMX19_02424	0.33	+0.7
2,545,048	-		MPMX19_02424	0.33	-0.1
2,545,048	-		MPMX19_02424	0.33	+1.7
2,545,048	-		MPMX19_02424	0.33	+0.2
2,545,048	-		MPMX19_02424	0.33	+1.2
2,545,048	-		MPMX19_02424	0.33	+0.7
2,545,048	-		MPMX19_02424	0.33	-0.3
2,545,161	+		MPMX19_02424	0.48	+0.5
2,545,161	+		MPMX19_02424	0.48	-0.3
2,545,161	+		MPMX19_02424	0.48	-0.9
2,545,161	+		MPMX19_02424	0.48	+1.2
2,545,162	-		MPMX19_02424	0.48	+0.7
2,545,271	+		MPMX19_02424	0.62	+0.2
2,545,271	+		MPMX19_02424	0.62	+1.2
2,545,272	-		MPMX19_02424	0.62	+0.7
2,545,272	-		MPMX19_02424	0.62	+0.7
2,545,341	+		MPMX19_02424	0.71	-0.1
2,545,342	-		MPMX19_02424	0.71	+1.8
2,545,342	-		MPMX19_02424	0.71	-0.1
2,545,458	-		MPMX19_02424	0.86	+0.7
2,545,560	+				+1.7
2,545,560	+				-0.5
2,545,561	-				+0.4
2,545,561	-				-1.1
2,546,503	-				-0.1
2,546,503	-				-0.1
2,546,503	-				+1.7
2,546,503	-				-0.7
2,546,503	-				-1.1
2,546,503	-				+0.5
2,546,503	-				+1.8
2,546,503	-				-0.6
2,546,503	-				-0.3
2,546,503	-				-0.3
2,546,503	-				+2.2
2,546,503	-				-0.2
2,546,503	-				-1.0
2,546,503	-				-1.8
2,546,505	-				+0.3
2,546,505	-				+1.6
2,546,505	-				-1.1
2,546,505	-				-0.1
2,546,505	-				+2.2
2,546,505	-				-1.1
2,546,505	-				-0.2
2,546,505	-				-0.9
2,546,534	+				-0.9
2,546,534	+				+0.4
2,546,534	+				-1.2
2,546,534	+				+0.4
2,546,534	+				-0.8
2,546,534	+				+1.2
2,546,534	+				-1.9
2,546,534	+				+0.7
2,546,534	+				-0.9
2,546,534	+				-0.6
2,546,534	+				+1.2
2,546,534	+				-1.5
2,546,534	+				-0.9
2,546,534	+				-0.6
2,546,534	+				-0.6
2,546,534	+				+0.7
2,546,534	+				-1.3
2,546,534	+				+0.9
2,546,535	-				-0.6
2,546,535	-				+1.0
2,546,535	-				+0.7
2,546,535	-				-0.5
2,546,535	-				+0.2
2,546,535	-				-0.2
2,546,535	-				+1.2
2,546,535	-				+1.0
2,546,535	-				-0.2
2,546,535	-				-0.9
2,546,535	-				+1.1
2,546,535	-				+0.4
2,546,535	-				-0.3
2,546,535	-				-0.9
2,546,535	-				+0.2
2,546,535	-				+0.4
2,546,535	-				+0.9
2,546,535	-				+0.9
2,546,535	-				-1.7
2,546,535	-				-0.2