Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02408

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
2,527,862	+		MPMX19_02406	0.45	-1.2
2,527,863	-		MPMX19_02406	0.45	+0.9
2,527,924	+		MPMX19_02406	0.53	+0.1
2,527,924	+		MPMX19_02406	0.53	-0.3
2,527,924	+		MPMX19_02406	0.53	-0.4
2,527,924	+		MPMX19_02406	0.53	-1.2
2,527,924	+		MPMX19_02406	0.53	-0.7
2,527,925	-		MPMX19_02406	0.53	-0.1
2,527,925	-		MPMX19_02406	0.53	-0.7
2,527,925	-		MPMX19_02406	0.53	-1.1
2,527,925	-		MPMX19_02406	0.53	-0.6
2,527,925	-		MPMX19_02406	0.53	-0.2
2,527,925	-		MPMX19_02406	0.53	-1.3
2,527,967	+		MPMX19_02406	0.58	-1.1
2,527,967	+		MPMX19_02406	0.58	-0.4
2,527,967	+		MPMX19_02406	0.58	-0.0
2,527,967	+		MPMX19_02406	0.58	-1.6
2,527,968	-		MPMX19_02406	0.58	+0.7
2,527,968	-		MPMX19_02406	0.58	+0.1
2,527,968	-		MPMX19_02406	0.58	+0.2
2,527,968	-		MPMX19_02406	0.58	+1.6
2,528,027	+		MPMX19_02406	0.65	-0.9
2,528,027	+		MPMX19_02406	0.65	-1.0
2,528,027	+		MPMX19_02406	0.65	-0.8
2,528,027	+		MPMX19_02406	0.65	-0.6
2,528,027	+		MPMX19_02406	0.65	+1.2
2,528,027	+		MPMX19_02406	0.65	-1.2
2,528,027	+		MPMX19_02406	0.65	+0.3
2,528,027	+		MPMX19_02406	0.65	-0.1
2,528,028	-		MPMX19_02406	0.65	-0.1
2,528,028	-		MPMX19_02406	0.65	-0.3
2,528,045	+		MPMX19_02406	0.67	-1.1
2,528,045	+		MPMX19_02406	0.67	-0.4
2,528,045	+		MPMX19_02406	0.67	-1.0
2,528,045	+		MPMX19_02406	0.67	-0.1
2,528,045	+		MPMX19_02406	0.67	+0.5
2,528,045	+		MPMX19_02406	0.67	-0.3
2,528,045	+		MPMX19_02406	0.67	-0.3
2,528,045	+		MPMX19_02406	0.67	+0.9
2,528,045	+		MPMX19_02406	0.67	-1.0
2,528,045	+		MPMX19_02406	0.67	+0.4
2,528,045	+		MPMX19_02406	0.67	+0.2
2,528,045	+		MPMX19_02406	0.67	-1.5
2,528,045	+		MPMX19_02406	0.67	+0.7
2,528,045	+		MPMX19_02406	0.67	-0.2
2,528,045	+		MPMX19_02406	0.67	+0.5
2,528,046	-		MPMX19_02406	0.67	-0.8
2,528,046	-		MPMX19_02406	0.67	-0.8
2,528,046	-		MPMX19_02406	0.67	-1.6
2,528,046	-		MPMX19_02406	0.67	-0.1
2,528,046	-		MPMX19_02406	0.67	+1.0
2,528,046	-		MPMX19_02406	0.67	-0.1
2,528,046	-		MPMX19_02406	0.67	-0.6
2,528,046	-		MPMX19_02406	0.67	-0.8
2,528,046	-		MPMX19_02406	0.67	-0.1
2,528,046	-		MPMX19_02406	0.67	-1.1
2,528,046	-		MPMX19_02406	0.67	+2.7
2,528,046	-		MPMX19_02406	0.67	-1.6
2,528,046	-		MPMX19_02406	0.67	-1.5
2,528,046	-		MPMX19_02406	0.67	-0.7
2,528,046	-		MPMX19_02406	0.67	-0.2
2,528,046	-		MPMX19_02406	0.67	-1.3
2,528,046	-		MPMX19_02406	0.67	-0.6
2,528,046	-		MPMX19_02406	0.67	-2.3
2,528,046	-		MPMX19_02406	0.67	-0.9
2,528,046	-		MPMX19_02406	0.67	-0.1
2,528,046	-		MPMX19_02406	0.67	-1.1
2,528,046	-		MPMX19_02406	0.67	-1.9
2,528,046	-		MPMX19_02406	0.67	-0.1
2,528,342	+				-0.4
2,528,342	+				+0.5
2,528,342	+				+0.1
2,528,342	+				-0.3
2,528,342	+				-0.3
2,528,343	-				+0.2
2,528,343	-				-0.7
2,528,343	-				-1.3
2,528,356	-				-0.7
2,528,356	-				-1.1
2,528,424	+				+0.5
2,528,424	+				-0.4
2,528,424	+				+0.1
2,528,424	+				-2.2
2,528,424	+				+0.2
2,528,425	-				-1.2
2,528,425	-				+0.1
2,528,425	-				-1.2
2,528,505	-				-0.3
2,528,546	+				-0.2
2,528,546	+				-1.1
2,528,546	+				-2.8
2,528,546	+				+0.2
2,528,546	+				-0.6
2,528,546	+				-1.5
2,528,546	+				-0.9
2,528,546	+				+0.7
2,528,546	+				-0.7
2,528,546	+				+0.2
2,528,546	+				+0.2
2,528,546	+				-0.8
2,528,546	+				-1.2
2,528,546	+				+0.2
2,528,547	-				-0.8
2,528,547	-				+0.7
2,528,547	-				+0.4
2,528,547	-				-2.3
2,528,547	-				-0.6
2,528,547	-				+0.5
2,528,547	-				-1.8
2,528,547	-				-0.0
2,528,547	-				-1.9
2,528,547	-				-0.8
2,528,547	-				+0.6
2,528,547	-				-0.9
2,528,547	-				+0.4
2,528,547	-				-0.6
2,528,547	-				+1.2
2,528,759	+				-0.3
2,528,819	+				+0.4
2,529,633	-				+0.6
2,529,633	-				+0.4
2,529,633	-				-0.0
2,529,633	-				-0.3
2,529,633	-				-0.7
2,529,633	-				-0.6
2,529,633	-				-0.3
2,529,633	-				-0.9
2,529,633	-				-0.7
2,529,633	-				-0.5
2,529,633	-				-0.8
2,529,633	-				-2.1
2,529,633	-				-0.2
2,529,633	-				+0.2