Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02335

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
2,459,315	+				-0.9
2,459,315	+				-0.3
2,459,315	+				-0.6
2,459,315	+				+0.0
2,459,315	+				-1.7
2,459,315	+				-0.3
2,459,315	+				-0.3
2,459,315	+				-1.4
2,459,315	+				-1.1
2,459,315	+				-0.3
2,459,316	-				+0.1
2,459,316	-				+0.8
2,459,316	-				-1.0
2,459,316	-				-1.2
2,459,316	-				-0.3
2,459,316	-				-1.3
2,459,316	-				-0.6
2,459,537	+				-0.3
2,459,537	+				+1.1
2,459,537	+				+0.4
2,459,537	+				-1.2
2,459,537	+				+0.9
2,459,537	+				+0.1
2,459,537	+				-0.0
2,459,537	+				-1.2
2,459,537	+				+0.2
2,459,537	+				-0.8
2,459,537	+				-0.9
2,459,538	-				-0.8
2,459,538	-				-1.0
2,459,538	-				+0.5
2,459,538	-				+0.7
2,459,538	-				-0.1
2,459,538	-				+1.0
2,459,538	-				+1.9
2,459,538	-				-0.1
2,459,538	-				+0.7
2,459,538	-				+1.1
2,459,632	+				-0.2
2,459,633	-				+0.9
2,459,633	-				-1.9
2,459,687	+				-0.6
2,459,687	+				-0.2
2,459,687	+				-0.1
2,459,687	+				-2.1
2,459,688	-				-0.6
2,459,688	-				+0.2
2,459,688	-				-1.8
2,459,688	-				-0.3
2,459,688	-				-1.1
2,459,730	+		MPMX19_02335	0.12	-1.8
2,459,730	+		MPMX19_02335	0.12	-0.6
2,459,730	+		MPMX19_02335	0.12	-0.9
2,459,730	+		MPMX19_02335	0.12	+0.9
2,459,730	+		MPMX19_02335	0.12	+2.0
2,459,730	+		MPMX19_02335	0.12	+0.2
2,459,730	+		MPMX19_02335	0.12	+1.4
2,459,730	+		MPMX19_02335	0.12	-0.1
2,459,730	+		MPMX19_02335	0.12	+0.2
2,459,730	+		MPMX19_02335	0.12	+0.5
2,459,731	-		MPMX19_02335	0.13	+1.9
2,459,731	-		MPMX19_02335	0.13	-0.6
2,459,731	-		MPMX19_02335	0.13	-0.1
2,459,731	-		MPMX19_02335	0.13	-0.3
2,459,731	-		MPMX19_02335	0.13	+1.2
2,459,731	-		MPMX19_02335	0.13	-1.2
2,459,745	+		MPMX19_02335	0.15	+0.2
2,459,745	+		MPMX19_02335	0.15	-1.3
2,459,745	+		MPMX19_02335	0.15	-0.6
2,459,745	+		MPMX19_02335	0.15	-0.6
2,459,746	-		MPMX19_02335	0.16	-0.8
2,459,746	-		MPMX19_02335	0.16	-0.3
2,459,746	-		MPMX19_02335	0.16	+0.7
2,459,746	-		MPMX19_02335	0.16	+0.2
2,459,746	-		MPMX19_02335	0.16	-1.3
2,459,746	-		MPMX19_02335	0.16	-1.0
2,459,746	-		MPMX19_02335	0.16	-0.3
2,459,820	+		MPMX19_02335	0.30	-0.6
2,459,820	+		MPMX19_02335	0.30	-1.5
2,459,820	+		MPMX19_02335	0.30	-0.3
2,459,820	+		MPMX19_02335	0.30	-1.2
2,459,820	+		MPMX19_02335	0.30	-1.1
2,459,820	+		MPMX19_02335	0.30	-0.3
2,459,820	+		MPMX19_02335	0.30	-0.6
2,459,820	+		MPMX19_02335	0.30	-0.6
2,459,820	+		MPMX19_02335	0.30	+2.2
2,459,820	+		MPMX19_02335	0.30	-0.3
2,459,820	+		MPMX19_02335	0.30	-1.7
2,459,820	+		MPMX19_02335	0.30	+0.8
2,459,820	+		MPMX19_02335	0.30	+1.4
2,459,820	+		MPMX19_02335	0.30	-0.8
2,459,820	+		MPMX19_02335	0.30	+0.0
2,459,820	+		MPMX19_02335	0.30	-1.5
2,459,820	+		MPMX19_02335	0.30	-0.0
2,459,820	+		MPMX19_02335	0.30	+0.4
2,459,820	+		MPMX19_02335	0.30	-0.1
2,459,821	-		MPMX19_02335	0.30	+0.4
2,459,821	-		MPMX19_02335	0.30	-0.4
2,459,821	-		MPMX19_02335	0.30	-0.3
2,459,821	-		MPMX19_02335	0.30	-1.2
2,459,821	-		MPMX19_02335	0.30	+1.2
2,459,821	-		MPMX19_02335	0.30	-1.7
2,459,821	-		MPMX19_02335	0.30	-0.3
2,459,821	-		MPMX19_02335	0.30	+0.2
2,459,821	-		MPMX19_02335	0.30	+0.2
2,460,218	+				-0.8
2,460,218	+				-0.1
2,460,218	+				-0.3
2,460,218	+				-0.1
2,460,218	+				-1.6
2,460,218	+				+0.2
2,460,218	+				+0.3
2,460,218	+				-1.8
2,460,219	-				+0.9
2,460,219	-				-0.2
2,460,219	-				-1.3
2,460,219	-				-0.0
2,460,219	-				+1.8
2,460,219	-				-0.9
2,460,219	-				+0.2
2,460,219	-				-0.6
2,460,219	-				+0.2
2,460,219	-				+0.1
2,460,219	-				-0.3
2,460,219	-				+0.2
2,460,219	-				+0.2
2,460,219	-				-0.9
2,460,219	-				-0.8
2,460,219	-				-0.6
2,460,219	-				-0.1
2,460,219	-				-0.6
2,460,650	+		MPMX19_02336	0.26	+0.2
2,460,650	+		MPMX19_02336	0.26	+0.2
2,460,650	+		MPMX19_02336	0.26	-0.6
2,460,650	+		MPMX19_02336	0.26	+0.1
2,460,650	+		MPMX19_02336	0.26	-0.2
2,460,650	+		MPMX19_02336	0.26	-1.2
2,460,650	+		MPMX19_02336	0.26	+1.6
2,460,650	+		MPMX19_02336	0.26	+0.7
2,460,650	+		MPMX19_02336	0.26	-0.4
2,460,651	-		MPMX19_02336	0.26	-0.8
2,460,651	-		MPMX19_02336	0.26	+0.2
2,460,651	-		MPMX19_02336	0.26	-1.1
2,460,651	-		MPMX19_02336	0.26	-0.1
2,460,651	-		MPMX19_02336	0.26	-1.2
2,460,651	-		MPMX19_02336	0.26	-0.8
2,460,651	-		MPMX19_02336	0.26	-1.4
2,460,651	-		MPMX19_02336	0.26	+0.2
2,460,651	-		MPMX19_02336	0.26	-0.3
2,460,664	+		MPMX19_02336	0.27	-2.1
2,460,664	+		MPMX19_02336	0.27	-1.1
2,460,664	+		MPMX19_02336	0.27	+0.4
2,460,664	+		MPMX19_02336	0.27	-0.6
2,460,664	+		MPMX19_02336	0.27	+0.2
2,460,665	-		MPMX19_02336	0.27	-1.1
2,460,665	-		MPMX19_02336	0.27	-0.1
2,460,665	-		MPMX19_02336	0.27	-0.4
2,460,751	+		MPMX19_02336	0.31	-0.3
2,460,751	+		MPMX19_02336	0.31	-1.0
2,460,751	+		MPMX19_02336	0.31	-1.1
2,460,752	-		MPMX19_02336	0.31	-0.8
2,460,752	-		MPMX19_02336	0.31	-0.7
2,460,752	-		MPMX19_02336	0.31	-0.2
2,460,752	-		MPMX19_02336	0.31	-0.9
2,460,752	-		MPMX19_02336	0.31	-2.0
2,460,752	-		MPMX19_02336	0.31	-0.8
2,460,752	-		MPMX19_02336	0.31	-0.1
2,460,852	+		MPMX19_02336	0.37	+1.0
2,460,852	+		MPMX19_02336	0.37	-0.1
2,460,852	+		MPMX19_02336	0.37	-0.1
2,460,852	+		MPMX19_02336	0.37	-0.3
2,460,852	+		MPMX19_02336	0.37	+1.6
2,460,852	+		MPMX19_02336	0.37	-0.3
2,460,852	+		MPMX19_02336	0.37	-0.8
2,460,852	+		MPMX19_02336	0.37	+1.0
2,460,852	+		MPMX19_02336	0.37	+0.6
2,460,852	+		MPMX19_02336	0.37	+0.6
2,460,852	+		MPMX19_02336	0.37	+0.2
2,460,852	+		MPMX19_02336	0.37	-0.8
2,460,852	+		MPMX19_02336	0.37	+0.9
2,460,852	+		MPMX19_02336	0.37	-2.3
2,460,853	-		MPMX19_02336	0.37	-0.5
2,460,853	-		MPMX19_02336	0.37	-0.9
2,460,853	-		MPMX19_02336	0.37	+0.7
2,460,853	-		MPMX19_02336	0.37	+0.7
2,460,853	-		MPMX19_02336	0.37	-0.8
2,460,853	-		MPMX19_02336	0.37	+1.2
2,460,853	-		MPMX19_02336	0.37	-0.6
2,460,853	-		MPMX19_02336	0.37	+0.4
2,460,853	-		MPMX19_02336	0.37	-0.9
2,460,853	-		MPMX19_02336	0.37	+0.3
2,460,853	-		MPMX19_02336	0.37	-1.2
2,460,853	-		MPMX19_02336	0.37	-0.7
2,460,853	-		MPMX19_02336	0.37	-0.3
2,460,853	-		MPMX19_02336	0.37	-0.6
2,460,853	-		MPMX19_02336	0.37	-0.8
2,460,853	-		MPMX19_02336	0.37	-0.3
2,460,902	+		MPMX19_02336	0.40	-0.3
2,460,902	+		MPMX19_02336	0.40	-0.0
2,460,902	+		MPMX19_02336	0.40	+1.5
2,460,902	+		MPMX19_02336	0.40	-0.8
2,460,902	+		MPMX19_02336	0.40	+0.4
2,460,902	+		MPMX19_02336	0.40	+0.4
2,460,902	+		MPMX19_02336	0.40	+1.1
2,460,902	+		MPMX19_02336	0.40	-0.3
2,460,902	+		MPMX19_02336	0.40	+1.2
2,460,902	+		MPMX19_02336	0.40	+0.1
2,460,902	+		MPMX19_02336	0.40	-0.9
2,460,902	+		MPMX19_02336	0.40	+0.1
2,460,902	+		MPMX19_02336	0.40	+0.1
2,460,902	+		MPMX19_02336	0.40	-0.7
2,460,902	+		MPMX19_02336	0.40	-1.5
2,460,902	+		MPMX19_02336	0.40	-0.8
2,460,902	+		MPMX19_02336	0.40	+0.2
2,460,902	+		MPMX19_02336	0.40	-0.9
2,460,902	+		MPMX19_02336	0.40	+0.4
2,460,902	+		MPMX19_02336	0.40	+0.1
2,460,902	+		MPMX19_02336	0.40	+0.1
2,460,902	+		MPMX19_02336	0.40	+0.2
2,460,902	+		MPMX19_02336	0.40	+0.2
2,460,902	+		MPMX19_02336	0.40	-0.3
2,460,902	+		MPMX19_02336	0.40	+1.4
2,460,902	+		MPMX19_02336	0.40	-0.6
2,460,902	+		MPMX19_02336	0.40	-1.3
2,460,902	+		MPMX19_02336	0.40	-0.3
2,460,902	+		MPMX19_02336	0.40	+0.7
2,460,902	+		MPMX19_02336	0.40	+0.7
2,460,902	+		MPMX19_02336	0.40	+0.2
2,460,902	+		MPMX19_02336	0.40	-1.8
2,460,902	+		MPMX19_02336	0.40	-0.8
2,460,902	+		MPMX19_02336	0.40	-0.6
2,460,902	+		MPMX19_02336	0.40	-0.1
2,460,902	+		MPMX19_02336	0.40	+0.7
2,460,902	+		MPMX19_02336	0.40	-2.3
2,460,902	+		MPMX19_02336	0.40	+0.7
2,460,902	+		MPMX19_02336	0.40	-0.2
2,460,902	+		MPMX19_02336	0.40	-0.7
2,460,902	+		MPMX19_02336	0.40	-0.1
2,460,902	+		MPMX19_02336	0.40	+0.4
2,460,902	+		MPMX19_02336	0.40	+1.7
2,460,902	+		MPMX19_02336	0.40	+0.2
2,460,902	+		MPMX19_02336	0.40	-2.1
2,460,902	+		MPMX19_02336	0.40	+0.2
2,460,902	+		MPMX19_02336	0.40	+0.2
2,460,902	+		MPMX19_02336	0.40	+0.1
2,460,902	+		MPMX19_02336	0.40	-0.8
2,460,902	+		MPMX19_02336	0.40	-1.5
2,460,902	+		MPMX19_02336	0.40	+0.0
2,460,902	+		MPMX19_02336	0.40	-0.8
2,460,902	+		MPMX19_02336	0.40	+0.4
2,460,902	+		MPMX19_02336	0.40	+0.3
2,460,902	+		MPMX19_02336	0.40	-1.6
2,460,902	+		MPMX19_02336	0.40	-0.6
2,460,902	+		MPMX19_02336	0.40	+0.8
2,460,902	+		MPMX19_02336	0.40	+0.4
2,460,902	+		MPMX19_02336	0.40	-0.6
2,460,903	-		MPMX19_02336	0.40	+0.8
2,460,903	-		MPMX19_02336	0.40	+1.2
2,460,903	-		MPMX19_02336	0.40	+0.2
2,460,903	-		MPMX19_02336	0.40	-1.2
2,460,903	-		MPMX19_02336	0.40	-0.2
2,460,903	-		MPMX19_02336	0.40	-0.1
2,460,903	-		MPMX19_02336	0.40	+1.2
2,460,903	-		MPMX19_02336	0.40	+0.2
2,460,903	-		MPMX19_02336	0.40	-0.8
2,460,903	-		MPMX19_02336	0.40	+0.4
2,460,903	-		MPMX19_02336	0.40	-0.6
2,460,903	-		MPMX19_02336	0.40	-1.2
2,460,903	-		MPMX19_02336	0.40	-0.1
2,460,903	-		MPMX19_02336	0.40	+1.2
2,460,903	-		MPMX19_02336	0.40	-0.2
2,460,903	-		MPMX19_02336	0.40	-1.1
2,460,903	-		MPMX19_02336	0.40	+0.5
2,460,903	-		MPMX19_02336	0.40	-1.1
2,460,903	-		MPMX19_02336	0.40	-0.9
2,460,903	-		MPMX19_02336	0.40	-0.3
2,460,903	-		MPMX19_02336	0.40	-1.0
2,460,903	-		MPMX19_02336	0.40	+1.8
2,460,903	-		MPMX19_02336	0.40	-1.3
2,460,903	-		MPMX19_02336	0.40	+0.2
2,460,903	-		MPMX19_02336	0.40	-0.2
2,460,903	-		MPMX19_02336	0.40	+1.2
2,460,903	-		MPMX19_02336	0.40	+0.2
2,460,903	-		MPMX19_02336	0.40	+0.2
2,460,903	-		MPMX19_02336	0.40	-0.4
2,460,903	-		MPMX19_02336	0.40	-0.9
2,460,903	-		MPMX19_02336	0.40	-0.8
2,460,903	-		MPMX19_02336	0.40	-1.2
2,460,903	-		MPMX19_02336	0.40	-0.2
2,460,903	-		MPMX19_02336	0.40	+0.2
2,460,903	-		MPMX19_02336	0.40	-0.8
2,460,903	-		MPMX19_02336	0.40	+0.0
2,460,903	-		MPMX19_02336	0.40	-0.1
2,460,903	-		MPMX19_02336	0.40	+0.7
2,460,903	-		MPMX19_02336	0.40	+0.5
2,460,903	-		MPMX19_02336	0.40	+0.1
2,460,903	-		MPMX19_02336	0.40	-0.3
2,460,903	-		MPMX19_02336	0.40	-0.8
2,460,903	-		MPMX19_02336	0.40	-0.3
2,460,903	-		MPMX19_02336	0.40	-0.9
2,460,903	-		MPMX19_02336	0.40	-0.2
2,460,903	-		MPMX19_02336	0.40	-1.1
2,460,903	-		MPMX19_02336	0.40	+0.3
2,460,903	-		MPMX19_02336	0.40	+0.1
2,460,903	-		MPMX19_02336	0.40	-0.6
2,460,903	-		MPMX19_02336	0.40	-0.8
2,460,903	-		MPMX19_02336	0.40	-0.7
2,460,903	-		MPMX19_02336	0.40	+0.5
2,460,903	-		MPMX19_02336	0.40	-0.3
2,460,903	-		MPMX19_02336	0.40	-1.8
2,460,903	-		MPMX19_02336	0.40	-1.6
2,460,903	-		MPMX19_02336	0.40	-0.5
2,460,903	-		MPMX19_02336	0.40	-0.7
2,460,903	-		MPMX19_02336	0.40	-0.4
2,460,903	-		MPMX19_02336	0.40	+1.7
2,460,903	-		MPMX19_02336	0.40	-0.3
2,460,903	-		MPMX19_02336	0.40	-2.0
2,460,903	-		MPMX19_02336	0.40	-1.2
2,460,903	-		MPMX19_02336	0.40	+0.7
2,460,903	-		MPMX19_02336	0.40	-0.1
2,460,903	-		MPMX19_02336	0.40	+0.1
2,460,903	-		MPMX19_02336	0.40	-2.4
2,460,903	-		MPMX19_02336	0.40	-0.3
2,460,903	-		MPMX19_02336	0.40	+1.2
2,460,903	-		MPMX19_02336	0.40	-0.1
2,460,903	-		MPMX19_02336	0.40	+1.0
2,460,903	-		MPMX19_02336	0.40	-1.1
2,460,903	-		MPMX19_02336	0.40	-0.1
2,460,903	-		MPMX19_02336	0.40	-0.0
2,460,903	-		MPMX19_02336	0.40	-0.9
2,460,903	-		MPMX19_02336	0.40	-0.5
2,460,903	-		MPMX19_02336	0.40	-0.3
2,460,903	-		MPMX19_02336	0.40	-1.0
2,460,903	-		MPMX19_02336	0.40	-0.3
2,460,903	-		MPMX19_02336	0.40	-1.8
2,460,903	-		MPMX19_02336	0.40	-2.3
2,460,903	-		MPMX19_02336	0.40	-1.5
2,460,904	+		MPMX19_02336	0.40	-1.6
2,460,904	+		MPMX19_02336	0.40	+0.5
2,460,904	+		MPMX19_02336	0.40	+1.7
2,460,904	+		MPMX19_02336	0.40	-3.2
2,460,904	+		MPMX19_02336	0.40	+0.7
2,460,904	+		MPMX19_02336	0.40	+0.3
2,460,904	+		MPMX19_02336	0.40	-0.3
2,460,904	+		MPMX19_02336	0.40	+0.4
2,460,904	+		MPMX19_02336	0.40	+0.3
2,460,904	+		MPMX19_02336	0.40	-0.1
2,460,904	+		MPMX19_02336	0.40	+0.2
2,460,904	+		MPMX19_02336	0.40	-0.5
2,460,904	+		MPMX19_02336	0.40	-1.6
2,460,904	+		MPMX19_02336	0.40	+1.2
2,460,905	-		MPMX19_02336	0.40	-0.7
2,460,905	-		MPMX19_02336	0.40	-1.4
2,460,905	-		MPMX19_02336	0.40	-0.3
2,460,905	-		MPMX19_02336	0.40	+0.8
2,460,905	-		MPMX19_02336	0.40	-0.1
2,460,905	-		MPMX19_02336	0.40	+1.5
2,460,905	-		MPMX19_02336	0.40	-1.3
2,460,905	-		MPMX19_02336	0.40	-0.9
2,460,905	-		MPMX19_02336	0.40	+0.1
2,460,905	-		MPMX19_02336	0.40	-0.8
2,460,905	-		MPMX19_02336	0.40	+0.9
2,460,905	-		MPMX19_02336	0.40	-2.2
2,460,905	-		MPMX19_02336	0.40	-0.1
2,460,945	+		MPMX19_02336	0.42	+0.2
2,460,945	+		MPMX19_02336	0.42	+0.9
2,460,945	+		MPMX19_02336	0.42	-0.9
2,460,945	+		MPMX19_02336	0.42	+0.8
2,460,945	+		MPMX19_02336	0.42	-1.4
2,460,945	+		MPMX19_02336	0.42	+0.9
2,460,945	+		MPMX19_02336	0.42	-0.8
2,460,945	+		MPMX19_02336	0.42	-0.5
2,460,945	+		MPMX19_02336	0.42	-0.0
2,460,945	+		MPMX19_02336	0.42	+0.4
2,460,946	-		MPMX19_02336	0.42	+0.4
2,460,946	-		MPMX19_02336	0.42	+0.7
2,460,946	-		MPMX19_02336	0.42	-0.6
2,460,946	-		MPMX19_02336	0.42	-0.3
2,460,946	-		MPMX19_02336	0.42	-0.3
2,460,961	+		MPMX19_02336	0.43	-1.9