Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02314

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
2,434,280	+		MPMX19_02313	0.36	+0.9
2,434,281	-		MPMX19_02313	0.36	+1.4
2,434,400	+		MPMX19_02313	0.45	-2.1
2,434,401	-		MPMX19_02313	0.45	+0.7
2,434,489	+		MPMX19_02313	0.51	+0.9
2,434,490	+		MPMX19_02313	0.51	-0.1
2,434,490	+		MPMX19_02313	0.51	-0.8
2,434,490	+		MPMX19_02313	0.51	-0.3
2,434,490	+		MPMX19_02313	0.51	-2.0
2,434,490	+		MPMX19_02313	0.51	-1.0
2,434,490	+		MPMX19_02313	0.51	+1.2
2,434,490	+		MPMX19_02313	0.51	+0.2
2,434,490	+		MPMX19_02313	0.51	+2.2
2,434,490	+		MPMX19_02313	0.51	-1.6
2,434,491	-		MPMX19_02313	0.51	-1.0
2,434,491	-		MPMX19_02313	0.51	+0.1
2,434,491	-		MPMX19_02313	0.51	+1.2
2,434,491	-		MPMX19_02313	0.51	+0.7
2,434,491	-		MPMX19_02313	0.51	+0.7
2,434,491	-		MPMX19_02313	0.51	+0.8
2,434,491	-		MPMX19_02313	0.51	+0.8
2,434,491	-		MPMX19_02313	0.51	+1.0
2,434,491	-		MPMX19_02313	0.51	+0.7
2,434,491	-		MPMX19_02313	0.51	+0.5
2,434,491	-		MPMX19_02313	0.51	-0.3
2,434,863	+		MPMX19_02313	0.77	-1.2
2,434,863	+		MPMX19_02313	0.77	-0.8
2,434,863	+		MPMX19_02313	0.77	+1.2
2,434,863	+		MPMX19_02313	0.77	-0.3
2,434,863	+		MPMX19_02313	0.77	-1.2
2,434,864	-		MPMX19_02313	0.77	-0.1
2,434,864	-		MPMX19_02313	0.77	+0.6
2,434,864	-		MPMX19_02313	0.77	-0.3
2,434,864	-		MPMX19_02313	0.77	-0.6
2,434,864	-		MPMX19_02313	0.77	+0.2
2,434,874	+		MPMX19_02313	0.78	-0.1
2,434,874	+		MPMX19_02313	0.78	-0.1
2,434,874	+		MPMX19_02313	0.78	+1.2
2,434,874	+		MPMX19_02313	0.78	-0.1
2,434,875	-		MPMX19_02313	0.78	-0.3
2,434,875	-		MPMX19_02313	0.78	+1.8
2,434,875	-		MPMX19_02313	0.78	+1.2
2,434,892	+		MPMX19_02313	0.79	+2.2
2,434,892	+		MPMX19_02313	0.79	-0.8
2,434,925	+		MPMX19_02313	0.82	+0.9
2,434,925	+		MPMX19_02313	0.82	+1.2
2,434,925	+		MPMX19_02313	0.82	-1.3
2,434,926	-		MPMX19_02313	0.82	+1.7
2,434,926	-		MPMX19_02313	0.82	+0.4
2,434,926	-		MPMX19_02313	0.82	+0.7
2,434,961	+		MPMX19_02313	0.84	+1.0
2,434,961	+		MPMX19_02313	0.84	-0.6
2,434,961	+		MPMX19_02313	0.84	-0.8
2,434,961	+		MPMX19_02313	0.84	+0.4
2,434,962	-		MPMX19_02313	0.84	-0.5
2,434,962	-		MPMX19_02313	0.84	-0.1
2,434,962	-		MPMX19_02313	0.84	+0.3
2,435,009	+		MPMX19_02313	0.87	+0.4
2,435,009	+		MPMX19_02313	0.87	+1.2
2,435,009	+		MPMX19_02313	0.87	-0.6
2,435,009	+		MPMX19_02313	0.87	-0.9
2,435,009	+		MPMX19_02313	0.87	+0.2
2,435,009	+		MPMX19_02313	0.87	-0.1
2,435,010	-		MPMX19_02313	0.88	+3.0
2,435,010	-		MPMX19_02313	0.88	-0.2
2,435,010	-		MPMX19_02313	0.88	-0.3
2,435,054	+				-0.2
2,435,054	+				+0.7
2,435,054	+				-0.8
2,435,055	-				+1.1
2,435,063	+				-0.6
2,435,064	-				-1.3
2,435,064	-				-0.3
2,435,064	-				+0.8
2,435,087	+				+0.7
2,435,087	+				-0.6
2,435,087	+				-0.8
2,435,087	+				+0.7
2,435,087	+				+0.6
2,435,087	+				-1.7
2,435,087	+				+0.4
2,435,087	+				+0.7
2,435,087	+				-0.6
2,435,088	-				-0.1
2,435,088	-				+0.7
2,435,088	-				+1.2
2,435,088	-				-0.3
2,435,088	-				+0.1
2,435,088	-				-0.2
2,435,088	-				+0.2
2,435,088	-				-0.9
2,435,088	-				+0.9
2,435,088	-				+0.4
2,435,088	-				-0.1
2,435,088	-				+1.2
2,435,088	-				-1.1
2,435,415	+		MPMX19_02314	0.33	+0.7
2,435,416	-		MPMX19_02314	0.33	-1.1
2,435,416	-		MPMX19_02314	0.33	+0.7
2,435,416	-		MPMX19_02314	0.33	-1.5
2,435,416	-		MPMX19_02314	0.33	-0.2
2,435,416	-		MPMX19_02314	0.33	+0.2
2,435,416	-		MPMX19_02314	0.33	+0.7
2,435,416	-		MPMX19_02314	0.33	-0.6
2,435,477	+		MPMX19_02314	0.47	+1.0
2,435,477	+		MPMX19_02314	0.47	+0.2
2,435,477	+		MPMX19_02314	0.47	-1.3
2,435,477	+		MPMX19_02314	0.47	+0.1
2,435,477	+		MPMX19_02314	0.47	-0.7
2,435,477	+		MPMX19_02314	0.47	-2.3
2,435,477	+		MPMX19_02314	0.47	-0.7
2,435,477	+		MPMX19_02314	0.47	+1.0
2,435,477	+		MPMX19_02314	0.47	+0.8
2,435,477	+		MPMX19_02314	0.47	-1.2
2,435,477	+		MPMX19_02314	0.47	-0.2
2,435,477	-		MPMX19_02314	0.47	-0.8
2,435,478	-		MPMX19_02314	0.47	+0.8
2,435,478	-		MPMX19_02314	0.47	+0.1
2,435,478	-		MPMX19_02314	0.47	+1.5
2,435,478	-		MPMX19_02314	0.47	-0.2
2,435,478	-		MPMX19_02314	0.47	-1.1
2,435,478	-		MPMX19_02314	0.47	-0.6
2,435,478	-		MPMX19_02314	0.47	+0.4
2,435,478	-		MPMX19_02314	0.47	-0.2
2,435,478	-		MPMX19_02314	0.47	-2.1
2,435,478	-		MPMX19_02314	0.47	-0.5
2,435,478	-		MPMX19_02314	0.47	-1.2
2,435,478	-		MPMX19_02314	0.47	-0.9
2,435,478	-		MPMX19_02314	0.47	-1.2
2,435,478	-		MPMX19_02314	0.47	-0.6
2,435,649	+		MPMX19_02314	0.86	-0.8
2,435,649	+		MPMX19_02314	0.86	-0.1
2,435,649	+		MPMX19_02314	0.86	+0.2
2,435,649	+		MPMX19_02314	0.86	-0.9
2,435,650	-		MPMX19_02314	0.86	+0.2
2,435,650	-		MPMX19_02314	0.86	-0.6
2,435,650	-		MPMX19_02314	0.86	+0.2
2,435,650	-		MPMX19_02314	0.86	+1.5
2,435,650	-		MPMX19_02314	0.86	-1.4
2,435,860	+				+0.1
2,435,860	+				+0.6
2,435,860	+				+1.3
2,435,860	+				-1.4
2,435,860	+				-0.3
2,435,860	+				+0.0
2,435,860	+				-0.6
2,435,860	+				-1.3
2,435,860	+				-0.3
2,435,860	+				+1.4
2,435,860	+				-1.3
2,435,860	+				+0.4
2,435,860	+				-1.2
2,435,861	-				+0.1
2,435,861	-				-0.8
2,435,861	-				-1.2
2,435,861	-				-0.1
2,435,861	-				-0.9
2,435,861	-				+0.1
2,435,861	-				-0.9
2,435,861	-				-1.6
2,435,861	-				-0.9
2,435,861	-				-0.5
2,435,861	-				+0.6
2,435,861	-				-0.5
2,435,861	-				+0.2
2,435,952	+				-0.9
2,435,952	+				-1.0
2,435,953	-				-1.0
2,435,953	-				-0.5
2,436,090	+		MPMX19_02315	0.16	-0.1
2,436,090	+		MPMX19_02315	0.16	-1.5
2,436,090	+		MPMX19_02315	0.16	-1.1
2,436,090	+		MPMX19_02315	0.16	-1.1
2,436,091	-		MPMX19_02315	0.16	-2.3
2,436,091	-		MPMX19_02315	0.16	-0.5
2,436,091	-		MPMX19_02315	0.16	+0.2
2,436,331	-		MPMX19_02315	0.36	-1.8
2,436,471	+		MPMX19_02315	0.48	-0.4
2,436,471	+		MPMX19_02315	0.48	+0.1
2,436,471	+		MPMX19_02315	0.48	-0.6
2,436,471	+		MPMX19_02315	0.48	+0.1
2,436,472	-		MPMX19_02315	0.48	-1.7
2,436,472	-		MPMX19_02315	0.48	-1.7
2,436,472	-		MPMX19_02315	0.48	+0.8
2,436,472	-		MPMX19_02315	0.48	-1.6
2,436,472	-		MPMX19_02315	0.48	-0.4
2,436,472	-		MPMX19_02315	0.48	-0.7
2,436,472	-		MPMX19_02315	0.48	-0.3
2,436,472	-		MPMX19_02315	0.48	-0.9
2,436,472	-		MPMX19_02315	0.48	+0.5
2,436,472	-		MPMX19_02315	0.48	-2.0
2,436,570	+		MPMX19_02315	0.56	+1.0
2,436,570	+		MPMX19_02315	0.56	-2.6
2,436,570	+		MPMX19_02315	0.56	+0.1
2,436,570	+		MPMX19_02315	0.56	-1.2
2,436,570	+		MPMX19_02315	0.56	-0.1
2,436,570	+		MPMX19_02315	0.56	-0.3
2,436,570	+		MPMX19_02315	0.56	+0.4
2,436,570	+		MPMX19_02315	0.56	-1.2
2,436,570	+		MPMX19_02315	0.56	-1.8
2,436,570	+		MPMX19_02315	0.56	-0.6
2,436,570	+		MPMX19_02315	0.56	+1.1
2,436,570	+		MPMX19_02315	0.56	-0.2
2,436,570	+		MPMX19_02315	0.56	-0.5
2,436,570	+		MPMX19_02315	0.56	-0.2
2,436,570	+		MPMX19_02315	0.56	-1.4
2,436,570	+		MPMX19_02315	0.56	-1.6
2,436,570	+		MPMX19_02315	0.56	-1.6
2,436,570	+		MPMX19_02315	0.56	-0.5
2,436,570	+		MPMX19_02315	0.56	-0.8
2,436,570	+		MPMX19_02315	0.56	-0.3
2,436,570	+		MPMX19_02315	0.56	-0.8
2,436,570	+		MPMX19_02315	0.56	-0.8
2,436,570	+		MPMX19_02315	0.56	+0.7
2,436,570	+		MPMX19_02315	0.56	-0.3
2,436,570	+		MPMX19_02315	0.56	-0.8
2,436,570	+		MPMX19_02315	0.56	-0.2
2,436,570	+		MPMX19_02315	0.56	-0.7
2,436,570	+		MPMX19_02315	0.56	+0.4
2,436,571	-		MPMX19_02315	0.56	-0.6
2,436,571	-		MPMX19_02315	0.56	-1.0
2,436,571	-		MPMX19_02315	0.56	-0.8
2,436,571	-		MPMX19_02315	0.56	+0.2
2,436,571	-		MPMX19_02315	0.56	-0.8
2,436,571	-		MPMX19_02315	0.56	+0.0
2,436,571	-		MPMX19_02315	0.56	+0.6
2,436,571	-		MPMX19_02315	0.56	-0.7
2,436,571	-		MPMX19_02315	0.56	+0.1
2,436,571	-		MPMX19_02315	0.56	-0.5
2,436,571	-		MPMX19_02315	0.56	+1.2
2,436,571	-		MPMX19_02315	0.56	-0.2
2,436,571	-		MPMX19_02315	0.56	+0.1
2,436,571	-		MPMX19_02315	0.56	+1.2
2,436,571	-		MPMX19_02315	0.56	+0.3