Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02257

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
2,375,216	+		MPMX19_02256	0.38	-0.7
2,375,216	+		MPMX19_02256	0.38	+0.2
2,375,216	+		MPMX19_02256	0.38	-1.2
2,375,216	+		MPMX19_02256	0.38	+0.8
2,375,216	+		MPMX19_02256	0.38	+0.1
2,375,217	-		MPMX19_02256	0.39	+1.5
2,375,217	-		MPMX19_02256	0.39	-1.4
2,375,217	-		MPMX19_02256	0.39	-0.6
2,375,339	+		MPMX19_02256	0.58	+0.6
2,375,339	+		MPMX19_02256	0.58	+0.9
2,375,339	+		MPMX19_02256	0.58	-0.2
2,375,339	+		MPMX19_02256	0.58	+0.6
2,375,339	+		MPMX19_02256	0.58	-0.7
2,375,339	+		MPMX19_02256	0.58	-2.2
2,375,339	+		MPMX19_02256	0.58	-1.8
2,375,339	+		MPMX19_02256	0.58	-0.6
2,375,339	+		MPMX19_02256	0.58	-0.9
2,375,339	+		MPMX19_02256	0.58	-1.2
2,375,340	-		MPMX19_02256	0.58	-0.6
2,375,340	-		MPMX19_02256	0.58	-0.1
2,375,340	-		MPMX19_02256	0.58	+0.2
2,375,340	-		MPMX19_02256	0.58	+1.0
2,375,340	-		MPMX19_02256	0.58	-1.4
2,375,346	-		MPMX19_02256	0.59	-1.1
2,375,346	-		MPMX19_02256	0.59	-0.6
2,375,346	-		MPMX19_02256	0.59	-0.1
2,375,425	+		MPMX19_02256	0.72	-1.0
2,375,425	+		MPMX19_02256	0.72	-1.5
2,375,425	+		MPMX19_02256	0.72	-0.5
2,375,425	+		MPMX19_02256	0.72	-2.6
2,375,425	+		MPMX19_02256	0.72	-0.8
2,375,425	+		MPMX19_02256	0.72	+1.2
2,375,425	+		MPMX19_02256	0.72	-0.8
2,375,425	+		MPMX19_02256	0.72	-0.9
2,375,425	+		MPMX19_02256	0.72	+0.5
2,375,425	+		MPMX19_02256	0.72	+0.3
2,375,425	+		MPMX19_02256	0.72	-1.4
2,375,425	+		MPMX19_02256	0.72	-0.9
2,375,425	+		MPMX19_02256	0.72	+0.2
2,375,425	+		MPMX19_02256	0.72	-1.2
2,375,426	-		MPMX19_02256	0.72	-1.8
2,375,426	-		MPMX19_02256	0.72	+0.5
2,375,426	-		MPMX19_02256	0.72	-1.5
2,375,426	-		MPMX19_02256	0.72	-0.1
2,375,426	-		MPMX19_02256	0.72	+0.2
2,375,426	-		MPMX19_02256	0.72	+1.6
2,375,426	-		MPMX19_02256	0.72	-1.2
2,375,426	-		MPMX19_02256	0.72	-0.3
2,375,426	-		MPMX19_02256	0.72	+1.3
2,375,426	-		MPMX19_02256	0.72	-1.5
2,375,441	-		MPMX19_02256	0.74	-0.4
2,375,441	-		MPMX19_02256	0.74	-1.1
2,375,441	-		MPMX19_02256	0.74	-1.4
2,375,456	+		MPMX19_02256	0.77	+0.6
2,375,456	+		MPMX19_02256	0.77	-1.2
2,375,456	+		MPMX19_02256	0.77	-0.4
2,375,456	+		MPMX19_02256	0.77	-0.8
2,375,456	+		MPMX19_02256	0.77	-1.3
2,375,457	-		MPMX19_02256	0.77	-1.3
2,375,457	-		MPMX19_02256	0.77	-0.0
2,375,457	-		MPMX19_02256	0.77	-1.1
2,375,457	-		MPMX19_02256	0.77	+0.5
2,375,457	-		MPMX19_02256	0.77	+0.1
2,375,457	-		MPMX19_02256	0.77	-1.6
2,375,457	-		MPMX19_02256	0.77	+0.4
2,375,585	+				+0.6
2,375,585	+				-0.2
2,375,585	+				-1.5
2,375,586	-				+0.8
2,375,586	-				+0.2
2,375,586	-				-0.0
2,375,586	-				+0.9
2,375,674	+				-2.4
2,375,674	+				-0.7
2,375,674	+				-0.4
2,375,674	+				-0.9
2,375,674	+				+0.2
2,375,674	+				+0.4
2,375,674	+				+0.4
2,375,674	+				-0.6
2,375,674	+				-0.9
2,375,674	+				+0.8
2,375,674	+				-2.6
2,375,674	+				+0.4
2,375,675	-				+0.2
2,375,675	-				-0.1
2,375,675	-				-0.2
2,375,675	-				-0.5
2,375,675	-				-2.0
2,375,675	-				-1.5
2,375,675	-				-1.9
2,375,675	-				-0.5
2,375,675	-				-0.7
2,375,675	-				-0.9
2,375,675	-				-0.8
2,375,675	-				+0.1
2,375,675	-				+0.1
2,375,675	-				-1.2
2,375,675	-				-2.1
2,375,675	-				+0.5
2,375,675	-				-0.2
2,376,061	+				-0.2
2,376,061	+				-1.1
2,376,062	-				-0.6
2,376,062	-				+0.1
2,376,062	-				-0.1
2,376,242	+		MPMX19_02257	0.57	-0.8
2,376,242	+		MPMX19_02257	0.57	-1.0
2,376,242	+		MPMX19_02257	0.57	-0.9
2,376,242	+		MPMX19_02257	0.57	-0.2
2,376,242	+		MPMX19_02257	0.57	-0.0
2,376,242	+		MPMX19_02257	0.57	-2.5
2,376,242	+		MPMX19_02257	0.57	+0.1
2,376,242	+		MPMX19_02257	0.57	-1.5
2,376,242	+		MPMX19_02257	0.57	-0.1
2,376,242	+		MPMX19_02257	0.57	+1.4
2,376,242	+		MPMX19_02257	0.57	+0.6
2,376,242	+		MPMX19_02257	0.57	-0.4
2,376,242	+		MPMX19_02257	0.57	-1.5
2,376,242	+		MPMX19_02257	0.57	-0.5
2,376,242	+		MPMX19_02257	0.57	+0.3
2,376,242	+		MPMX19_02257	0.57	-0.9
2,376,242	+		MPMX19_02257	0.57	+0.2
2,376,242	+		MPMX19_02257	0.57	+0.3
2,376,242	+		MPMX19_02257	0.57	-0.4
2,376,242	+		MPMX19_02257	0.57	-1.1
2,376,242	+		MPMX19_02257	0.57	+0.2
2,376,242	+		MPMX19_02257	0.57	-2.5
2,376,242	+		MPMX19_02257	0.57	+1.2
2,376,242	+		MPMX19_02257	0.57	-2.5
2,376,242	+		MPMX19_02257	0.57	-0.8
2,376,242	+		MPMX19_02257	0.57	-1.7
2,376,242	+		MPMX19_02257	0.57	-1.2
2,376,242	+		MPMX19_02257	0.57	+0.2
2,376,242	+		MPMX19_02257	0.57	+0.1
2,376,242	+		MPMX19_02257	0.57	-1.1
2,376,242	+		MPMX19_02257	0.57	-1.9
2,376,243	-		MPMX19_02257	0.58	+1.2
2,376,243	-		MPMX19_02257	0.58	+0.1
2,376,243	-		MPMX19_02257	0.58	+0.7
2,376,243	-		MPMX19_02257	0.58	-0.4
2,376,243	-		MPMX19_02257	0.58	+0.4
2,376,243	-		MPMX19_02257	0.58	+0.2
2,376,243	-		MPMX19_02257	0.58	-0.9
2,376,243	-		MPMX19_02257	0.58	-0.4
2,376,243	-		MPMX19_02257	0.58	-1.1
2,376,243	-		MPMX19_02257	0.58	-2.0
2,376,243	-		MPMX19_02257	0.58	-1.8
2,376,243	-		MPMX19_02257	0.58	-0.7
2,376,243	-		MPMX19_02257	0.58	+0.7
2,376,243	-		MPMX19_02257	0.58	-0.0
2,376,243	-		MPMX19_02257	0.58	-1.9
2,376,243	-		MPMX19_02257	0.58	-1.4
2,376,243	-		MPMX19_02257	0.58	-1.3
2,376,243	-		MPMX19_02257	0.58	-0.7
2,376,243	-		MPMX19_02257	0.58	-0.0
2,376,243	-		MPMX19_02257	0.58	-1.2
2,376,243	-		MPMX19_02257	0.58	+0.6
2,376,243	-		MPMX19_02257	0.58	-1.3
2,376,243	-		MPMX19_02257	0.58	-0.4
2,376,243	-		MPMX19_02257	0.58	-0.1
2,376,243	-		MPMX19_02257	0.58	-0.3
2,376,243	-		MPMX19_02257	0.58	-0.6
2,376,243	-		MPMX19_02257	0.58	-1.5
2,376,243	-		MPMX19_02257	0.58	-0.4
2,376,243	-		MPMX19_02257	0.58	-1.3
2,376,243	-		MPMX19_02257	0.58	+0.2
2,376,243	-		MPMX19_02257	0.58	+1.6
2,376,243	-		MPMX19_02257	0.58	-0.8
2,376,243	-		MPMX19_02257	0.58	-0.0
2,376,243	-		MPMX19_02257	0.58	-1.6
2,376,243	-		MPMX19_02257	0.58	+0.1
2,376,243	-		MPMX19_02257	0.58	-0.4
2,376,243	-		MPMX19_02257	0.58	-0.5
2,376,360	+				+0.4
2,376,361	-				-1.6
2,376,388	+				+0.2
2,376,389	-				-1.5
2,376,389	-				-0.4
2,376,434	+				-1.0
2,376,435	-				-0.1
2,376,437	+				+0.1
2,376,437	+				-0.2
2,376,438	-				+0.2
2,376,455	-				-0.4
2,376,463	+				-1.4
2,376,463	+				-0.9
2,376,463	+				+0.3
2,376,464	-				+0.7
2,376,464	-				-0.4
2,376,464	-				+0.2
2,376,471	+				-0.9
2,376,487	+				-0.8
2,376,488	-				+0.2
2,376,488	-				-1.0
2,376,507	+				+0.2
2,376,507	+				-0.9
2,376,519	+				-0.1
2,376,519	+				-1.7
2,376,519	+				+0.9
2,376,519	+				-1.6
2,376,520	-				-1.6
2,376,546	+				-0.9
2,376,546	+				+0.1
2,376,546	+				-0.9
2,376,546	+				-1.3
2,376,547	-				-0.9
2,376,547	-				-0.4
2,376,547	-				-0.2
2,376,547	-				-0.8
2,376,547	-				+2.0
2,376,572	+				-0.4
2,376,572	+				+0.0
2,376,579	+				-1.8
2,376,579	+				-1.2
2,376,580	-				-1.4
2,376,580	-				-0.5
2,376,580	-				-0.9
2,376,580	-				+0.1
2,376,588	+				-0.7
2,376,588	+				-1.1
2,376,588	+				+0.0
2,376,589	-				-1.5
2,376,589	-				+0.9
2,376,593	+				+0.3
2,376,593	+				-0.6
2,376,594	-				-1.2
2,376,594	-				-1.2
2,376,683	-		MPMX19_02258	0.30	-0.1
2,376,699	+		MPMX19_02258	0.35	-0.7
2,376,699	+		MPMX19_02258	0.35	+0.8
2,376,699	+		MPMX19_02258	0.35	-0.7
2,376,699	+		MPMX19_02258	0.35	+0.0
2,376,700	-		MPMX19_02258	0.35	-1.6
2,376,700	-		MPMX19_02258	0.35	-0.1
2,376,700	-		MPMX19_02258	0.35	+0.1
2,376,709	+		MPMX19_02258	0.38	-2.4
2,376,709	+		MPMX19_02258	0.38	-0.6
2,376,728	-		MPMX19_02258	0.43	-0.4
2,376,728	-		MPMX19_02258	0.43	-1.1
2,376,777	-		MPMX19_02258	0.56	-0.9
2,376,844	-		MPMX19_02258	0.75	+0.3
2,376,844	-		MPMX19_02258	0.75	-0.1
2,376,844	-		MPMX19_02258	0.75	+1.5
2,376,844	-		MPMX19_02258	0.75	-0.4
2,376,873	+		MPMX19_02258	0.83	+0.6
2,376,874	-		MPMX19_02258	0.83	-0.2
2,376,874	-		MPMX19_02258	0.83	-0.1
2,376,885	+		MPMX19_02258	0.86	-0.9
2,376,885	+		MPMX19_02258	0.86	-0.8
2,376,885	+		MPMX19_02258	0.86	-1.0
2,376,885	+		MPMX19_02258	0.86	-0.7
2,376,885	+		MPMX19_02258	0.86	-1.4
2,376,885	+		MPMX19_02258	0.86	-0.4
2,376,885	+		MPMX19_02258	0.86	-1.2
2,376,885	+		MPMX19_02258	0.86	-1.4
2,376,885	+		MPMX19_02258	0.86	-0.7
2,376,885	+		MPMX19_02258	0.86	-0.3
2,376,885	+		MPMX19_02258	0.86	+0.6
2,376,885	+		MPMX19_02258	0.86	-1.2
2,376,885	+		MPMX19_02258	0.86	+0.3
2,376,885	+		MPMX19_02258	0.86	-1.4
2,376,885	+		MPMX19_02258	0.86	+0.1
2,376,885	+		MPMX19_02258	0.86	+0.6
2,376,885	+		MPMX19_02258	0.86	+1.2
2,376,885	+		MPMX19_02258	0.86	-0.9
2,376,886	-		MPMX19_02258	0.87	-0.2
2,376,886	-		MPMX19_02258	0.87	+0.2
2,376,886	-		MPMX19_02258	0.87	-0.8
2,376,886	-		MPMX19_02258	0.87	+0.1
2,376,886	-		MPMX19_02258	0.87	-0.9
2,376,886	-		MPMX19_02258	0.87	+0.6
2,376,886	-		MPMX19_02258	0.87	+0.1
2,376,886	-		MPMX19_02258	0.87	+0.6
2,376,886	-		MPMX19_02258	0.87	-0.4
2,376,886	-		MPMX19_02258	0.87	-0.2
2,376,886	-		MPMX19_02258	0.87	-0.4
2,376,965	+				-0.5
2,376,965	+				-2.1
2,376,965	+				-1.5
2,376,965	+				+1.5
2,376,965	+				-0.8
2,376,965	+				-0.0
2,376,966	-				-0.6
2,376,966	-				-1.9
2,376,966	-				-0.9
2,376,966	-				+1.2
2,376,966	-				-0.7
2,376,966	-				-1.2
2,376,966	-				-0.2
2,376,966	-				+0.1
2,376,966	-				+0.1
2,376,966	-				-1.1
2,376,966	-				-1.5
2,376,969	+				-0.8
2,376,969	+				+0.1
2,376,969	+				+0.1
2,376,969	+				+0.9
2,376,969	+				-0.7
2,376,969	+				+0.1
2,376,969	+				-0.2
2,376,969	+				+0.1
2,376,969	+				+0.1
2,376,969	+				-0.6
2,376,969	+				+0.2
2,376,969	+				-1.2
2,376,969	+				-1.1
2,376,969	+				+0.3
2,376,969	+				-1.2
2,376,969	+				-0.7
2,376,969	+				-0.7
2,376,969	+				+0.1
2,376,969	+				+0.1
2,376,969	+				-1.1
2,376,969	+				-1.4
2,376,969	+				-1.1
2,376,969	+				-1.0
2,376,969	+				-0.8
2,376,969	+				-1.5
2,376,970	-				+1.5
2,376,970	-				-0.9
2,376,970	-				-0.8
2,376,970	-				+0.2
2,376,970	-				-0.6
2,376,970	-				+0.4
2,376,970	-				+0.8
2,376,970	-				-0.6
2,376,970	-				+0.2
2,376,970	-				-0.4
2,376,970	-				-0.4
2,376,970	-				+0.1
2,376,970	-				-1.2
2,376,970	-				+0.5
2,376,970	-				+0.1
2,376,970	-				-0.9
2,376,970	-				+0.9
2,376,970	-				-1.2
2,376,970	-				-0.8
2,376,970	-				-1.1
2,376,970	-				+0.3
2,376,970	-				+0.0
2,376,970	-				+0.0
2,376,970	-				-0.1
2,376,970	-				-0.4
2,376,970	-				+1.4
2,376,970	-				-0.9
2,376,970	-				+0.6
2,376,970	-				-0.9
2,376,970	-				-0.4
2,376,970	-				-0.1
2,376,970	-				+2.2
2,376,970	-				+0.6
2,376,970	-				+2.0
2,376,970	-				-1.1
2,376,970	-				+0.2
2,376,970	-				-0.1
2,376,970	-				+0.2
2,376,970	-				+0.0
2,376,970	-				+1.2
2,376,970	-				+0.0
2,376,970	-				-1.4
2,376,970	-				-0.5
2,376,970	-				-0.8
2,376,970	-				-0.2
2,376,973	+				-0.9
2,376,973	+				+1.1
2,376,973	+				-0.7
2,376,973	+				-0.6
2,376,973	+				-1.2
2,376,973	+				-1.1
2,376,973	+				-0.5
2,376,973	+				+1.2
2,376,973	+				-0.1
2,376,973	+				+0.4
2,376,973	+				-1.8
2,376,973	+				+1.8
2,376,973	+				+0.5
2,376,973	+				-0.9
2,376,973	+				-0.0
2,376,973	+				-0.8
2,376,973	+				-1.0
2,376,973	+				-0.8
2,376,973	+				-0.6
2,376,974	-				-1.4
2,376,974	-				+0.2
2,376,974	-				+1.6
2,376,974	-				-0.9
2,376,974	-				-0.9
2,376,974	-				-1.1
2,376,974	-				+0.4
2,376,974	-				-1.9
2,376,974	-				-0.2
2,376,974	-				-0.2
2,376,974	-				-1.1
2,376,974	-				-0.1
2,376,974	-				+0.6
2,376,974	-				-0.4
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