Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02217

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
2,321,147	+		MPMX19_02216	0.38	-1.6
2,321,147	+		MPMX19_02216	0.38	-1.0
2,321,147	+		MPMX19_02216	0.38	+0.2
2,321,147	+		MPMX19_02216	0.38	+1.7
2,321,147	+		MPMX19_02216	0.38	-0.6
2,321,147	+		MPMX19_02216	0.38	-1.3
2,321,147	+		MPMX19_02216	0.38	-1.0
2,321,148	-		MPMX19_02216	0.38	-0.6
2,321,148	-		MPMX19_02216	0.38	-0.3
2,321,148	-		MPMX19_02216	0.38	+0.4
2,321,148	-		MPMX19_02216	0.38	-0.6
2,321,148	-		MPMX19_02216	0.38	-0.5
2,321,148	-		MPMX19_02216	0.38	-1.0
2,321,148	-		MPMX19_02216	0.38	-1.3
2,321,198	+		MPMX19_02216	0.43	+0.6
2,321,198	+		MPMX19_02216	0.43	-0.3
2,321,198	+		MPMX19_02216	0.43	-1.3
2,321,198	+		MPMX19_02216	0.43	-1.0
2,321,199	-		MPMX19_02216	0.43	-0.1
2,321,199	-		MPMX19_02216	0.43	-0.3
2,321,249	+		MPMX19_02216	0.48	-0.7
2,321,249	+		MPMX19_02216	0.48	-1.3
2,321,249	+		MPMX19_02216	0.48	-1.5
2,321,249	+		MPMX19_02216	0.48	+0.9
2,321,249	+		MPMX19_02216	0.48	+0.8
2,321,250	-		MPMX19_02216	0.48	-0.2
2,321,250	-		MPMX19_02216	0.48	-0.6
2,321,426	+		MPMX19_02216	0.64	+0.2
2,321,426	+		MPMX19_02216	0.64	-0.2
2,321,426	+		MPMX19_02216	0.64	-1.0
2,321,426	+		MPMX19_02216	0.64	+0.4
2,321,426	+		MPMX19_02216	0.64	-2.2
2,321,426	+		MPMX19_02216	0.64	-0.4
2,321,426	+		MPMX19_02216	0.64	+0.8
2,321,426	+		MPMX19_02216	0.64	-0.0
2,321,426	+		MPMX19_02216	0.64	-1.1
2,321,426	+		MPMX19_02216	0.64	-1.0
2,321,427	-		MPMX19_02216	0.64	+0.2
2,321,427	-		MPMX19_02216	0.64	-1.3
2,321,427	-		MPMX19_02216	0.64	-0.2
2,321,427	-		MPMX19_02216	0.64	+1.5
2,321,427	-		MPMX19_02216	0.64	+0.9
2,321,427	-		MPMX19_02216	0.64	-2.1
2,321,427	-		MPMX19_02216	0.64	-1.1
2,321,427	-		MPMX19_02216	0.64	+0.6
2,321,546	+		MPMX19_02216	0.75	-0.6
2,321,546	+		MPMX19_02216	0.75	+0.6
2,321,546	+		MPMX19_02216	0.75	-1.0
2,321,546	+		MPMX19_02216	0.75	-1.3
2,321,546	+		MPMX19_02216	0.75	-0.5
2,321,546	+		MPMX19_02216	0.75	+1.1
2,321,546	+		MPMX19_02216	0.75	-0.7
2,321,546	+		MPMX19_02216	0.75	-1.3
2,321,546	+		MPMX19_02216	0.75	+0.2
2,321,546	+		MPMX19_02216	0.75	-1.5
2,321,547	-		MPMX19_02216	0.75	-1.1
2,321,547	-		MPMX19_02216	0.75	+0.4
2,321,547	-		MPMX19_02216	0.75	-1.1
2,321,547	-		MPMX19_02216	0.75	-1.4
2,321,708	+		MPMX19_02216	0.90	-0.8
2,321,708	+		MPMX19_02216	0.90	-0.5
2,321,708	+		MPMX19_02216	0.90	-1.1
2,321,708	+		MPMX19_02216	0.90	-0.1
2,321,708	+		MPMX19_02216	0.90	-0.7
2,321,708	+		MPMX19_02216	0.90	-0.1
2,321,708	+		MPMX19_02216	0.90	-0.2
2,321,708	+		MPMX19_02216	0.90	-0.2
2,321,708	+		MPMX19_02216	0.90	-0.1
2,321,708	+		MPMX19_02216	0.90	-0.5
2,321,708	+		MPMX19_02216	0.90	-1.6
2,321,708	+		MPMX19_02216	0.90	-0.0
2,321,708	+		MPMX19_02216	0.90	-0.6
2,321,708	+		MPMX19_02216	0.90	+0.5
2,321,708	+		MPMX19_02216	0.90	+0.4
2,321,708	+		MPMX19_02216	0.90	-0.6
2,321,708	+		MPMX19_02216	0.90	-0.3
2,321,708	+		MPMX19_02216	0.90	-1.3
2,321,708	+		MPMX19_02216	0.90	-1.1
2,321,708	+		MPMX19_02216	0.90	-1.3
2,321,709	-		MPMX19_02216	0.90	+0.9
2,321,709	-		MPMX19_02216	0.90	+0.9
2,321,709	-		MPMX19_02216	0.90	-0.6
2,321,709	-		MPMX19_02216	0.90	+0.5
2,321,709	-		MPMX19_02216	0.90	-0.8
2,321,709	-		MPMX19_02216	0.90	-0.3
2,321,709	-		MPMX19_02216	0.90	+0.7
2,321,709	-		MPMX19_02216	0.90	-0.5
2,321,709	-		MPMX19_02216	0.90	-1.3
2,321,709	-		MPMX19_02216	0.90	-0.6
2,321,709	-		MPMX19_02216	0.90	-0.9
2,321,709	-		MPMX19_02216	0.90	-0.4
2,321,709	-		MPMX19_02216	0.90	-0.4
2,321,709	-		MPMX19_02216	0.90	-0.7
2,321,709	-		MPMX19_02216	0.90	-0.3
2,321,709	-		MPMX19_02216	0.90	-0.6
2,321,709	-		MPMX19_02216	0.90	-1.3
2,321,709	-		MPMX19_02216	0.90	-0.8
2,321,709	-		MPMX19_02216	0.90	-0.1
2,321,709	-		MPMX19_02216	0.90	+0.8
2,321,709	-		MPMX19_02216	0.90	-1.0
2,321,709	-		MPMX19_02216	0.90	+0.6
2,321,709	-		MPMX19_02216	0.90	-0.3
2,321,709	-		MPMX19_02216	0.90	-1.6
2,321,709	-		MPMX19_02216	0.90	-0.3
2,321,709	-		MPMX19_02216	0.90	-0.1
2,321,709	-		MPMX19_02216	0.90	-0.4
2,321,729	+				+0.5
2,321,729	+				-0.3
2,321,729	+				+0.7
2,321,729	+				-0.8
2,321,729	+				-1.2
2,321,729	+				-0.5
2,321,729	+				-0.6
2,321,729	+				-1.0
2,321,729	+				-0.1
2,321,729	+				-1.1
2,321,729	+				-0.4
2,321,729	+				-0.9
2,321,729	+				-1.5
2,321,729	+				-0.9
2,321,729	+				-0.1
2,321,729	+				-0.1
2,321,729	+				-0.9
2,321,729	+				-0.3
2,321,729	+				-0.5
2,321,729	+				-0.5
2,321,729	+				+0.6
2,321,729	+				-0.8
2,321,729	+				+0.6
2,321,729	+				+0.7
2,321,729	+				-1.0
2,321,729	+				-1.1
2,321,729	+				-1.3
2,321,729	+				+0.2
2,321,729	+				-0.9
2,321,730	-				-2.0
2,321,730	-				+0.1
2,321,730	-				-0.8
2,321,730	-				+2.0
2,321,730	-				-0.9
2,321,730	-				+0.3
2,321,730	-				-0.5
2,321,730	-				-0.7
2,321,730	-				+0.7
2,321,730	-				-1.1
2,321,730	-				+0.3
2,321,730	-				-1.7
2,321,730	-				-0.8
2,321,730	-				-1.7
2,321,730	-				-1.5
2,321,730	-				-1.0
2,321,730	-				-1.1
2,321,730	-				+0.0
2,321,730	-				-1.1
2,321,730	-				+0.2
2,321,730	-				-1.1
2,321,730	-				-1.8
2,321,730	-				-2.1
2,321,730	-				-1.0
2,321,730	-				-2.1
2,321,730	-				-1.4
2,321,730	-				-1.0
2,321,730	-				+1.6
2,321,730	-				-1.6
2,321,730	-				-1.0
2,321,730	-				+1.7
2,321,730	-				+0.1
2,321,730	-				+0.6
2,321,730	-				+0.6
2,321,730	-				+0.0
2,321,730	-				-0.5
2,321,730	-				-1.0
2,321,730	-				-0.8
2,321,730	-				+0.1
2,321,827	+				-0.4
2,321,827	+				-1.6
2,321,827	+				-0.0
2,321,827	+				-0.1
2,321,827	+				+1.2
2,321,827	+				-1.5
2,321,827	+				-0.3
2,321,827	+				-1.4
2,321,827	+				-0.8
2,321,827	+				-1.3
2,321,827	+				+0.7
2,321,827	+				-0.8
2,321,828	-				+0.2
2,321,828	-				+0.6
2,321,828	-				+0.1
2,321,828	-				+0.1
2,321,828	-				-0.6
2,321,828	-				-1.7
2,321,828	-				-0.2
2,321,828	-				-0.1
2,321,830	+				-0.5
2,321,830	+				-1.2
2,321,830	+				+0.4
2,321,830	+				+0.3
2,321,830	+				+0.2
2,321,830	+				-0.7
2,321,830	+				-0.4
2,321,830	+				-0.0
2,321,830	+				-0.7
2,321,830	+				-0.1
2,321,830	+				-0.5
2,321,830	+				+0.0
2,321,830	+				-0.1
2,321,830	+				-0.4
2,321,830	+				-1.2
2,321,830	+				-0.0
2,321,830	+				-0.3
2,321,830	+				-0.4
2,321,830	+				-1.3
2,321,831	-				+0.1
2,321,831	-				-0.6
2,321,831	-				+0.2
2,321,831	-				-1.1
2,321,831	-				-0.7
2,321,831	-				-0.4
2,321,831	-				-0.4
2,321,831	-				-0.7
2,321,831	-				-0.1
2,321,831	-				-0.6
2,321,831	-				+0.6
2,321,831	-				+0.3
2,321,831	-				+0.1
2,321,831	-				+0.4
2,321,832	+				-0.7
2,321,832	+				-0.7
2,321,832	+				+0.6
2,321,832	+				-0.1
2,321,832	+				-1.4
2,321,832	+				-1.5
2,321,832	+				-0.3
2,321,832	+				-0.3
2,321,832	+				-0.7
2,321,832	+				+0.4
2,321,832	+				+1.5
2,321,832	+				-1.3
2,321,832	+				-0.3
2,321,832	+				-0.8
2,321,832	+				-1.3
2,321,832	+				+0.2
2,321,832	+				-0.5
2,321,832	+				-0.9
2,321,832	+				-1.4
2,321,832	+				-0.6
2,321,832	+				-0.5
2,321,832	+				-2.1
2,321,833	-				-0.3
2,321,833	-				+1.2
2,321,833	-				-0.8
2,321,833	-				+0.4
2,321,833	-				-1.5
2,321,833	-				-0.2
2,321,833	-				-0.4
2,321,833	-				-0.5
2,321,833	-				-1.1
2,321,833	-				+0.2
2,321,833	-				-0.0
2,321,833	-				-2.3
2,321,833	-				-0.4
2,321,833	-				-0.5
2,321,833	-				-0.5
2,321,833	-				+0.1
2,321,833	-				+1.2
2,321,833	-				+0.2
2,321,833	-				-1.5
2,321,833	-				+0.7
2,321,833	-				+1.0
2,321,833	-				-1.3
2,321,833	-				+0.5
2,321,962	+		MPMX19_02217	0.11	-1.3
2,322,430	+		MPMX19_02217	0.62	+0.4
2,322,430	+		MPMX19_02217	0.62	-2.3
2,322,430	+		MPMX19_02217	0.62	-1.1
2,322,430	+		MPMX19_02217	0.62	-1.4
2,322,430	+		MPMX19_02217	0.62	-1.7
2,322,430	+		MPMX19_02217	0.62	-0.8
2,322,430	+		MPMX19_02217	0.62	-0.0
2,322,431	-		MPMX19_02217	0.62	-0.3
2,322,431	-		MPMX19_02217	0.62	-0.6
2,322,431	-		MPMX19_02217	0.62	-0.6
2,322,431	-		MPMX19_02217	0.62	-0.6
2,322,431	-		MPMX19_02217	0.62	+0.6
2,322,431	-		MPMX19_02217	0.62	-0.6
2,322,431	-		MPMX19_02217	0.62	-0.8
2,322,431	-		MPMX19_02217	0.62	+0.1
2,322,431	-		MPMX19_02217	0.62	+0.2
2,322,431	-		MPMX19_02217	0.62	+0.5
2,322,431	-		MPMX19_02217	0.62	-1.4
2,322,772	+				-0.6
2,322,772	+				-2.7
2,322,772	+				-0.6
2,322,772	+				-0.6
2,322,773	-				-1.5
2,322,773	-				-0.6
2,322,773	-				-2.2
2,322,773	-				-0.4
2,322,773	-				+0.6
2,322,773	-				-1.4
2,322,773	-				+0.5
2,322,786	+				-0.8
2,322,786	+				-0.8
2,322,792	+				+0.2
2,322,792	+				+0.2
2,322,793	-				+0.8
2,322,793	-				+1.2
2,322,806	+				+1.3
2,322,831	+				-0.2
2,322,831	+				-0.4
2,322,831	+				-0.1
2,322,831	+				-2.1
2,322,831	+				-0.8
2,322,831	+				+0.8
2,322,832	-				+0.9
2,322,832	-				+0.1
2,323,214	+		MPMX19_02218	0.78	+1.5
2,323,214	+		MPMX19_02218	0.78	+0.4
2,323,214	+		MPMX19_02218	0.78	+0.4
2,323,214	+		MPMX19_02218	0.78	-1.7
2,323,215	-		MPMX19_02218	0.78	+0.4
2,323,277	+				-1.8
2,323,277	+				-0.2
2,323,277	+				-0.5
2,323,277	+				-1.1
2,323,277	+				-0.4
2,323,277	+				-1.7
2,323,277	+				-1.2
2,323,277	+				-0.1
2,323,277	+				-0.6
2,323,277	+				-1.1
2,323,277	+				+0.6
2,323,277	+				-1.6
2,323,277	+				+0.5
2,323,277	+				+0.7
2,323,277	+				+0.3
2,323,277	+				+0.7
2,323,277	+				+0.9
2,323,277	+				+0.2
2,323,277	+				-1.6
2,323,277	+				-0.8
2,323,277	+				-1.1
2,323,277	+				-0.8
2,323,277	+				+0.6
2,323,277	+				-0.4
2,323,278	-				-0.3
2,323,278	-				-0.1
2,323,278	-				-1.1
2,323,278	-				-1.8
2,323,278	-				-0.2
2,323,278	-				-2.3
2,323,278	-				-0.4
2,323,278	-				-0.8
2,323,278	-				-1.7
2,323,278	-				-1.7
2,323,278	-				-1.0
2,323,278	-				+0.0
2,323,278	-				-0.6
2,323,278	-				+1.2
2,323,278	-				-0.8
2,323,278	-				+0.0
2,323,278	-				+0.3
2,323,278	-				-0.5
2,323,278	-				+0.1
2,323,278	-				-0.2
2,323,278	-				-2.2
2,323,391	+				-0.9
2,323,391	+				-0.1
2,323,391	+				-0.8
2,323,391	+				+0.8
2,323,391	+				-0.0
2,323,391	+				-1.4
2,323,391	+				-1.0
2,323,391	+				-0.5
2,323,392	-				-0.1
2,323,392	-				-1.5
2,323,392	-				-0.4
2,323,392	-				-0.7
2,323,476	+				-1.0
2,323,477	-				+0.1
2,323,477	-				-1.4
2,323,626	+				-0.3
2,323,626	+				+0.8
2,323,626	+				-0.7
2,323,626	+				-0.6
2,323,626	+				-0.7
2,323,626	+				-1.3
2,323,626	+				+0.1
2,323,626	+				-1.6
2,323,626	+				-0.6
2,323,626	+				+0.2
2,323,626	+				-1.3
2,323,626	+				-0.6
2,323,627	-				-0.1
2,323,627	-				-0.5
2,323,627	-				+0.8
2,323,627	-				+1.0
2,323,627	-				-1.3
2,323,627	-				-1.1
2,323,627	-				+0.2
2,323,627	-				+0.6
2,323,627	-				+0.5
2,323,627	-				+0.5
2,323,627	-				-0.2
2,323,627	-				-2.0
2,323,627	-				+0.0