Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02192

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
2,293,926	-		MPMX19_02191	0.36	+2.2
2,293,926	-		MPMX19_02191	0.36	+2.2
2,293,926	-		MPMX19_02191	0.36	+0.2
2,294,615	+				+0.2
2,294,615	+				+0.6
2,294,615	+				+0.2
2,294,615	+				+0.2
2,294,693	+				-2.3
2,294,693	+				+0.1
2,294,693	+				-1.8
2,294,693	+				-1.5
2,294,693	+				-0.7
2,294,693	+				-1.0
2,294,693	+				+0.2
2,294,693	+				+0.2
2,294,693	+				-0.5
2,294,693	+				+0.0
2,294,694	-				+0.0
2,294,694	-				+0.4
2,294,694	-				-1.8
2,294,694	-				+0.1
2,294,694	-				-0.2
2,294,694	-				-0.6
2,294,694	-				-1.7
2,294,706	-				-1.3
2,294,826	+				-1.1
2,294,826	+				+1.2
2,294,826	+				-1.1
2,294,826	+				+0.6
2,294,826	+				+0.0
2,294,826	+				-1.1
2,294,827	-				-0.5
2,294,827	-				-1.5
2,294,827	-				+0.0
2,294,827	-				+0.3
2,294,827	-				-0.4
2,294,827	-				+0.0
2,294,827	-				-1.3
2,294,827	-				+0.1
2,294,827	-				-0.7
2,294,827	-				+0.4
2,294,827	-				-0.9
2,294,827	-				-0.1
2,294,928	+		MPMX19_02192	0.14	-1.0
2,294,928	+		MPMX19_02192	0.14	-0.8
2,294,928	+		MPMX19_02192	0.14	-0.9
2,294,928	+		MPMX19_02192	0.14	+0.2
2,294,928	+		MPMX19_02192	0.14	-0.1
2,294,928	+		MPMX19_02192	0.14	+0.2
2,294,928	+		MPMX19_02192	0.14	-0.9
2,294,928	+		MPMX19_02192	0.14	-0.0
2,294,929	-		MPMX19_02192	0.14	-2.3
2,294,929	-		MPMX19_02192	0.14	-1.3
2,294,929	-		MPMX19_02192	0.14	-1.1
2,294,929	-		MPMX19_02192	0.14	-0.1
2,294,929	-		MPMX19_02192	0.14	+0.2
2,294,929	-		MPMX19_02192	0.14	-1.1
2,294,929	-		MPMX19_02192	0.14	-1.8
2,294,929	-		MPMX19_02192	0.14	+0.4
2,294,929	-		MPMX19_02192	0.14	-0.1
2,294,929	-		MPMX19_02192	0.14	-1.5
2,294,929	-		MPMX19_02192	0.14	-0.4
2,294,929	-		MPMX19_02192	0.14	-1.8
2,294,929	-		MPMX19_02192	0.14	-0.4
2,295,036	+		MPMX19_02192	0.23	-1.3
2,295,036	+		MPMX19_02192	0.23	-0.8
2,295,036	+		MPMX19_02192	0.23	-1.3
2,295,036	+		MPMX19_02192	0.23	+1.0
2,295,036	+		MPMX19_02192	0.23	-0.9
2,295,036	+		MPMX19_02192	0.23	-1.8
2,295,036	+		MPMX19_02192	0.23	+0.0
2,295,036	+		MPMX19_02192	0.23	+0.2
2,295,036	+		MPMX19_02192	0.23	-0.8
2,295,036	+		MPMX19_02192	0.23	+1.2
2,295,036	+		MPMX19_02192	0.23	-0.3
2,295,036	+		MPMX19_02192	0.23	-0.1
2,295,036	+		MPMX19_02192	0.23	-1.3
2,295,037	-		MPMX19_02192	0.24	-1.1
2,295,037	-		MPMX19_02192	0.24	-0.7
2,295,037	-		MPMX19_02192	0.24	-0.3
2,295,037	-		MPMX19_02192	0.24	-0.4
2,295,037	-		MPMX19_02192	0.24	-1.7
2,295,037	-		MPMX19_02192	0.24	-0.1
2,295,037	-		MPMX19_02192	0.24	+1.8
2,295,037	-		MPMX19_02192	0.24	-0.2
2,295,037	-		MPMX19_02192	0.24	+0.0
2,295,037	-		MPMX19_02192	0.24	-1.1
2,295,037	-		MPMX19_02192	0.24	+0.9
2,295,037	-		MPMX19_02192	0.24	+0.0
2,295,037	-		MPMX19_02192	0.24	+0.3
2,295,037	-		MPMX19_02192	0.24	-1.1
2,295,037	-		MPMX19_02192	0.24	-0.9
2,295,037	-		MPMX19_02192	0.24	+2.0
2,295,037	-		MPMX19_02192	0.24	+0.9
2,295,243	+		MPMX19_02192	0.41	-1.6
2,295,243	+		MPMX19_02192	0.41	-0.7
2,295,243	+		MPMX19_02192	0.41	-1.3
2,295,243	+		MPMX19_02192	0.41	-2.1
2,295,243	+		MPMX19_02192	0.41	+0.7
2,295,243	+		MPMX19_02192	0.41	-0.8
2,295,243	+		MPMX19_02192	0.41	-0.3
2,295,243	+		MPMX19_02192	0.41	+1.2
2,295,243	+		MPMX19_02192	0.41	-1.2
2,295,244	-		MPMX19_02192	0.41	-2.0
2,295,244	-		MPMX19_02192	0.41	+0.2
2,295,244	-		MPMX19_02192	0.41	+1.1
2,295,244	-		MPMX19_02192	0.41	+0.2
2,295,244	-		MPMX19_02192	0.41	-0.4
2,295,244	-		MPMX19_02192	0.41	-1.0
2,295,244	-		MPMX19_02192	0.41	-1.1
2,295,244	-		MPMX19_02192	0.41	-1.9
2,295,254	-		MPMX19_02192	0.42	-1.1
2,295,254	-		MPMX19_02192	0.42	+0.4
2,295,254	-		MPMX19_02192	0.42	+0.0
2,295,255	+		MPMX19_02192	0.42	+0.8
2,295,255	+		MPMX19_02192	0.42	-0.4
2,295,255	+		MPMX19_02192	0.42	+0.6
2,295,255	+		MPMX19_02192	0.42	+0.5
2,295,256	-		MPMX19_02192	0.42	+1.0
2,295,256	-		MPMX19_02192	0.42	-0.4
2,295,256	-		MPMX19_02192	0.42	-0.4
2,295,256	-		MPMX19_02192	0.42	-0.3
2,295,256	-		MPMX19_02192	0.42	-1.2
2,295,256	-		MPMX19_02192	0.42	-0.2
2,295,256	-		MPMX19_02192	0.42	-1.4
2,295,256	-		MPMX19_02192	0.42	+1.8
2,295,256	-		MPMX19_02192	0.42	+0.3
2,295,256	-		MPMX19_02192	0.42	-1.0
2,295,256	-		MPMX19_02192	0.42	+1.2
2,295,951	-				+0.2
2,295,951	-				+1.2
2,295,951	-				-0.5
2,295,951	-				-1.3
2,295,951	-				-0.1
2,295,951	-				-0.7
2,295,951	-				-0.4
2,296,004	-				+0.2
2,296,004	-				-1.7
2,296,004	-				+1.2
2,296,241	+				-1.1