Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02184

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
2,284,570	+		MPMX19_02183	0.38	-1.0
2,284,570	+		MPMX19_02183	0.38	-0.9
2,284,570	+		MPMX19_02183	0.38	+0.0
2,284,571	-		MPMX19_02183	0.38	-2.2
2,284,571	-		MPMX19_02183	0.38	-0.3
2,284,585	+		MPMX19_02183	0.40	-0.3
2,284,586	-		MPMX19_02183	0.40	-0.8
2,284,586	-		MPMX19_02183	0.40	-1.3
2,284,586	-		MPMX19_02183	0.40	-1.3
2,284,651	+		MPMX19_02183	0.46	-0.9
2,284,651	+		MPMX19_02183	0.46	-1.7
2,284,651	+		MPMX19_02183	0.46	-0.6
2,284,651	+		MPMX19_02183	0.46	+0.4
2,284,651	+		MPMX19_02183	0.46	-0.3
2,284,651	+		MPMX19_02183	0.46	+0.1
2,284,651	+		MPMX19_02183	0.46	+0.4
2,284,651	+		MPMX19_02183	0.46	-1.3
2,284,651	+		MPMX19_02183	0.46	-1.5
2,284,652	-		MPMX19_02183	0.46	-0.3
2,284,652	-		MPMX19_02183	0.46	+0.2
2,284,652	-		MPMX19_02183	0.46	+0.9
2,284,652	-		MPMX19_02183	0.46	-0.2
2,284,652	-		MPMX19_02183	0.46	-1.8
2,284,652	-		MPMX19_02183	0.46	-2.3
2,284,819	+		MPMX19_02183	0.62	-0.1
2,284,820	-		MPMX19_02183	0.62	-0.1
2,284,820	-		MPMX19_02183	0.62	-1.1
2,284,820	-		MPMX19_02183	0.62	-1.0
2,284,820	-		MPMX19_02183	0.62	-0.1
2,285,268	+				+0.9
2,285,268	+				-0.4
2,285,268	+				+0.5
2,285,268	+				-0.7
2,285,268	+				-1.4
2,285,268	+				+0.9
2,285,268	+				+0.0
2,285,268	+				-1.7
2,285,268	+				-0.6
2,285,268	+				+0.0
2,285,268	+				+0.4
2,285,268	+				+0.2
2,285,268	+				+0.5
2,285,268	+				+1.0
2,285,268	+				-0.1
2,285,268	+				-0.3
2,285,268	+				+0.3
2,285,268	+				+1.4
2,285,268	+				+1.2
2,285,269	-				-1.3
2,285,269	-				+0.0
2,285,269	-				-0.7
2,285,269	-				+0.5
2,285,269	-				+0.9
2,285,269	-				+0.9
2,285,269	-				-0.6
2,285,269	-				-0.5
2,285,269	-				-1.0
2,285,269	-				-0.8
2,285,271	+				-0.3
2,285,271	+				-0.5
2,285,272	-				-1.5
2,285,272	-				-0.3
2,285,272	-				-1.5
2,285,272	-				-1.9
2,285,272	-				-1.3
2,285,313	+				+2.0
2,285,313	+				-1.0
2,285,313	+				-0.6
2,285,313	+				+0.2
2,285,314	-				+0.3
2,285,314	-				-1.3
2,285,314	-				-0.8
2,285,314	-				-1.4
2,285,319	+				-1.3
2,285,319	+				+0.3
2,285,319	+				-0.4
2,285,319	+				+0.3
2,285,319	+				+0.4
2,285,319	+				+1.0
2,285,319	+				+0.0
2,285,319	+				-0.2
2,285,319	+				-1.6
2,285,319	+				-0.5
2,285,341	+				-1.1
2,285,341	+				-2.3
2,285,341	+				-0.2
2,285,341	+				-0.4
2,285,342	-				-2.0
2,285,342	-				-1.5
2,285,342	-				+0.1
2,285,342	-				-0.7
2,285,342	-				-0.8
2,285,342	-				-0.1
2,285,381	+				+1.2
2,285,381	+				+0.0
2,285,381	+				-0.6
2,285,381	+				+0.9
2,285,381	+				-0.4
2,285,381	+				-0.5
2,285,382	-				-2.2
2,285,382	-				+0.4
2,285,382	-				+0.5
2,285,382	-				-0.2
2,285,382	-				+0.9
2,285,382	-				-0.4
2,285,382	-				-1.4
2,285,382	-				+0.0
2,285,382	-				+1.8
2,285,382	-				-0.8
2,285,382	-				+0.2
2,285,382	-				-0.8
2,285,382	-				+0.1
2,285,382	-				-0.6
2,285,382	-				-0.5
2,285,382	-				+0.6
2,285,382	-				+0.5
2,285,382	-				-0.1
2,285,705	+		MPMX19_02184	0.59	-0.9
2,285,705	+		MPMX19_02184	0.59	-0.6
2,285,705	+		MPMX19_02184	0.59	-0.4
2,285,705	+		MPMX19_02184	0.59	+1.8
2,285,705	+		MPMX19_02184	0.59	-1.0
2,285,705	+		MPMX19_02184	0.59	-1.3
2,285,705	+		MPMX19_02184	0.59	-0.2
2,285,705	+		MPMX19_02184	0.59	-2.8
2,285,705	+		MPMX19_02184	0.59	+0.9
2,285,705	+		MPMX19_02184	0.59	+0.6
2,285,705	+		MPMX19_02184	0.59	-0.1
2,285,705	+		MPMX19_02184	0.59	+0.2
2,285,705	+		MPMX19_02184	0.59	-0.2
2,285,705	+		MPMX19_02184	0.59	+0.4
2,285,705	+		MPMX19_02184	0.59	-0.5
2,285,705	+		MPMX19_02184	0.59	-0.4
2,285,705	+		MPMX19_02184	0.59	+1.2
2,285,705	+		MPMX19_02184	0.59	+1.2
2,285,706	-		MPMX19_02184	0.59	-1.0
2,285,706	-		MPMX19_02184	0.59	-0.4
2,285,706	-		MPMX19_02184	0.59	+0.4
2,285,706	-		MPMX19_02184	0.59	-1.0
2,285,706	-		MPMX19_02184	0.59	-0.7
2,285,706	-		MPMX19_02184	0.59	-0.7
2,285,706	-		MPMX19_02184	0.59	+0.4
2,285,706	-		MPMX19_02184	0.59	-0.6
2,285,706	-		MPMX19_02184	0.59	-0.5
2,285,706	-		MPMX19_02184	0.59	-0.7
2,285,706	-		MPMX19_02184	0.59	-1.1
2,285,706	-		MPMX19_02184	0.59	-1.0
2,285,706	-		MPMX19_02184	0.59	+0.2
2,285,729	+		MPMX19_02184	0.63	-1.0
2,285,729	+		MPMX19_02184	0.63	-0.6
2,285,729	+		MPMX19_02184	0.63	-0.8
2,285,729	+		MPMX19_02184	0.63	+0.0
2,285,729	+		MPMX19_02184	0.63	-0.0
2,285,729	+		MPMX19_02184	0.63	-0.6
2,285,729	+		MPMX19_02184	0.63	-1.0
2,285,729	+		MPMX19_02184	0.63	+0.2
2,285,729	+		MPMX19_02184	0.63	-0.1
2,285,729	+		MPMX19_02184	0.63	-0.0
2,285,729	+		MPMX19_02184	0.63	-0.1
2,285,729	+		MPMX19_02184	0.63	+0.1
2,285,729	+		MPMX19_02184	0.63	-0.1
2,285,729	+		MPMX19_02184	0.63	+0.3
2,285,729	+		MPMX19_02184	0.63	+0.1
2,285,729	+		MPMX19_02184	0.63	+1.0
2,285,729	+		MPMX19_02184	0.63	-1.5
2,285,729	+		MPMX19_02184	0.63	-0.2
2,285,729	+		MPMX19_02184	0.63	-1.3
2,285,729	+		MPMX19_02184	0.63	-0.8
2,285,729	+		MPMX19_02184	0.63	-0.6
2,285,729	+		MPMX19_02184	0.63	+1.1
2,285,729	+		MPMX19_02184	0.63	-0.6
2,285,729	+		MPMX19_02184	0.63	-2.3
2,285,729	+		MPMX19_02184	0.63	-0.6
2,285,729	+		MPMX19_02184	0.63	+0.6
2,285,729	+		MPMX19_02184	0.63	-1.6
2,285,729	+		MPMX19_02184	0.63	+0.0
2,285,729	+		MPMX19_02184	0.63	-1.2
2,285,730	-		MPMX19_02184	0.64	-0.6
2,285,730	-		MPMX19_02184	0.64	+1.0
2,285,730	-		MPMX19_02184	0.64	-0.3
2,285,730	-		MPMX19_02184	0.64	+1.2
2,285,730	-		MPMX19_02184	0.64	+0.4
2,285,730	-		MPMX19_02184	0.64	-0.8
2,285,730	-		MPMX19_02184	0.64	+0.2
2,285,730	-		MPMX19_02184	0.64	-1.3
2,285,730	-		MPMX19_02184	0.64	-2.6
2,285,730	-		MPMX19_02184	0.64	+0.6
2,285,730	-		MPMX19_02184	0.64	-1.4
2,285,730	-		MPMX19_02184	0.64	-1.6
2,285,730	-		MPMX19_02184	0.64	-0.3
2,285,730	-		MPMX19_02184	0.64	+0.7
2,285,730	-		MPMX19_02184	0.64	+0.2
2,285,730	-		MPMX19_02184	0.64	-0.6
2,285,730	-		MPMX19_02184	0.64	+0.2
2,285,730	-		MPMX19_02184	0.64	-0.7
2,285,730	-		MPMX19_02184	0.64	+0.6
2,285,730	-		MPMX19_02184	0.64	-1.9
2,285,730	-		MPMX19_02184	0.64	-0.1
2,285,730	-		MPMX19_02184	0.64	-0.6
2,285,730	-		MPMX19_02184	0.64	-0.1
2,285,730	-		MPMX19_02184	0.64	+1.4
2,285,730	-		MPMX19_02184	0.64	-0.0
2,285,730	-		MPMX19_02184	0.64	-0.8
2,285,730	-		MPMX19_02184	0.64	-1.0
2,285,730	-		MPMX19_02184	0.64	+0.4
2,285,730	-		MPMX19_02184	0.64	-2.4
2,285,873	+		MPMX19_02184	0.89	+0.5
2,285,873	+		MPMX19_02184	0.89	-1.0
2,285,874	-		MPMX19_02184	0.89	+1.2
2,285,874	-		MPMX19_02184	0.89	-0.3
2,285,874	-		MPMX19_02184	0.89	-0.1
2,285,874	-		MPMX19_02184	0.89	+0.6
2,285,874	-		MPMX19_02184	0.89	-0.6
2,285,874	-		MPMX19_02184	0.89	-0.4
2,285,976	+				-0.8
2,285,976	+				-0.5
2,285,976	+				-0.4
2,285,976	+				-0.6
2,285,976	+				-0.8
2,285,976	+				-2.1
2,285,976	+				-0.5
2,285,976	+				-0.5
2,285,976	+				-0.6
2,285,976	+				+0.4
2,285,976	+				+0.4
2,285,976	+				+0.8
2,285,976	+				-0.0
2,285,976	+				-0.4
2,285,976	+				-0.3
2,285,976	+				+0.6
2,285,976	+				-1.2
2,285,976	+				-0.1
2,285,976	+				+1.9
2,285,976	+				+0.2
2,285,977	-				-0.1
2,285,977	-				-0.6
2,285,977	-				-1.1
2,285,977	-				-1.1
2,285,977	-				-0.1
2,285,977	-				-1.1
2,285,977	-				+0.3
2,285,977	-				+0.8
2,285,977	-				+1.0
2,285,977	-				+0.6
2,285,977	-				+1.4
2,285,977	-				-0.1
2,285,977	-				-0.3
2,285,977	-				+0.5
2,285,977	-				-1.0
2,285,977	-				-0.9
2,285,977	-				+0.5
2,285,977	-				+0.0
2,285,977	-				+0.0
2,285,977	-				+0.7
2,285,977	-				-0.1
2,285,977	-				-0.4
2,285,977	-				-0.8
2,285,977	-				-0.7
2,285,977	-				+0.8
2,285,977	-				+0.4
2,285,977	-				-0.5
2,285,977	-				+0.6
2,285,977	-				-1.1
2,285,977	-				+0.8
2,285,977	-				-0.1
2,285,977	-				+0.4
2,286,243	+		MPMX19_02185	0.54	-0.7
2,286,243	+		MPMX19_02185	0.54	-1.3
2,286,243	+		MPMX19_02185	0.54	-0.9
2,286,243	+		MPMX19_02185	0.54	-1.0
2,286,243	+		MPMX19_02185	0.54	-0.5
2,286,243	+		MPMX19_02185	0.54	-1.0
2,286,243	+		MPMX19_02185	0.54	-0.9
2,286,243	+		MPMX19_02185	0.54	-1.0
2,286,243	+		MPMX19_02185	0.54	+0.8
2,286,243	+		MPMX19_02185	0.54	-1.1
2,286,243	+		MPMX19_02185	0.54	-0.6
2,286,243	+		MPMX19_02185	0.54	-0.1
2,286,243	+		MPMX19_02185	0.54	+2.4
2,286,243	+		MPMX19_02185	0.54	-1.1
2,286,243	+		MPMX19_02185	0.54	+1.0
2,286,243	+		MPMX19_02185	0.54	+0.3
2,286,243	+		MPMX19_02185	0.54	+0.9
2,286,243	+		MPMX19_02185	0.54	-2.2
2,286,243	+		MPMX19_02185	0.54	+1.2
2,286,243	+		MPMX19_02185	0.54	-0.1
2,286,243	+		MPMX19_02185	0.54	+1.6
2,286,243	+		MPMX19_02185	0.54	+1.2
2,286,243	+		MPMX19_02185	0.54	+0.3
2,286,243	+		MPMX19_02185	0.54	-0.9
2,286,243	+		MPMX19_02185	0.54	-1.5
2,286,243	+		MPMX19_02185	0.54	-1.0
2,286,243	+		MPMX19_02185	0.54	-0.4
2,286,243	+		MPMX19_02185	0.54	-1.1
2,286,243	+		MPMX19_02185	0.54	+0.0
2,286,243	+		MPMX19_02185	0.54	+0.0
2,286,243	+		MPMX19_02185	0.54	-0.7
2,286,243	+		MPMX19_02185	0.54	+2.2
2,286,243	+		MPMX19_02185	0.54	-0.9
2,286,243	+		MPMX19_02185	0.54	-1.1
2,286,243	+		MPMX19_02185	0.54	-0.0
2,286,243	+		MPMX19_02185	0.54	-2.9
2,286,243	+		MPMX19_02185	0.54	+1.3
2,286,243	+		MPMX19_02185	0.54	-1.5
2,286,243	+		MPMX19_02185	0.54	-0.4
2,286,243	+		MPMX19_02185	0.54	-1.1
2,286,243	+		MPMX19_02185	0.54	-0.8
2,286,243	+		MPMX19_02185	0.54	-0.3
2,286,243	+		MPMX19_02185	0.54	+0.4
2,286,243	+		MPMX19_02185	0.54	+0.3
2,286,243	+		MPMX19_02185	0.54	-0.7
2,286,243	+		MPMX19_02185	0.54	-1.2
2,286,243	+		MPMX19_02185	0.54	-1.4
2,286,243	+		MPMX19_02185	0.54	-0.5
2,286,243	+		MPMX19_02185	0.54	+1.4
2,286,243	+		MPMX19_02185	0.54	+0.1
2,286,243	+		MPMX19_02185	0.54	-1.4
2,286,243	+		MPMX19_02185	0.54	-0.1
2,286,243	+		MPMX19_02185	0.54	-0.6
2,286,243	+		MPMX19_02185	0.54	+0.9
2,286,243	+		MPMX19_02185	0.54	-2.3
2,286,243	+		MPMX19_02185	0.54	-1.0
2,286,244	-		MPMX19_02185	0.54	-0.5
2,286,244	-		MPMX19_02185	0.54	-0.3
2,286,244	-		MPMX19_02185	0.54	-0.0
2,286,244	-		MPMX19_02185	0.54	+0.6
2,286,244	-		MPMX19_02185	0.54	-1.3
2,286,244	-		MPMX19_02185	0.54	+0.8
2,286,244	-		MPMX19_02185	0.54	-0.3
2,286,244	-		MPMX19_02185	0.54	-2.5
2,286,244	-		MPMX19_02185	0.54	-1.2
2,286,244	-		MPMX19_02185	0.54	-0.4
2,286,244	-		MPMX19_02185	0.54	+0.4
2,286,244	-		MPMX19_02185	0.54	+0.6
2,286,244	-		MPMX19_02185	0.54	-0.6
2,286,244	-		MPMX19_02185	0.54	-1.1
2,286,244	-		MPMX19_02185	0.54	-0.6
2,286,244	-		MPMX19_02185	0.54	+0.4
2,286,244	-		MPMX19_02185	0.54	-0.5
2,286,244	-		MPMX19_02185	0.54	+0.3
2,286,244	-		MPMX19_02185	0.54	+0.6
2,286,244	-		MPMX19_02185	0.54	-0.1
2,286,244	-		MPMX19_02185	0.54	+1.1
2,286,244	-		MPMX19_02185	0.54	+0.6
2,286,244	-		MPMX19_02185	0.54	+0.5
2,286,244	-		MPMX19_02185	0.54	+2.2
2,286,244	-		MPMX19_02185	0.54	+1.0
2,286,244	-		MPMX19_02185	0.54	-0.8
2,286,244	-		MPMX19_02185	0.54	+1.0
2,286,244	-		MPMX19_02185	0.54	-0.8
2,286,244	-		MPMX19_02185	0.54	+0.5
2,286,244	-		MPMX19_02185	0.54	-0.3
2,286,244	-		MPMX19_02185	0.54	-1.8
2,286,244	-		MPMX19_02185	0.54	-0.9
2,286,244	-		MPMX19_02185	0.54	-0.3
2,286,309	+		MPMX19_02185	0.67	-0.4
2,286,309	+		MPMX19_02185	0.67	-2.2
2,286,309	+		MPMX19_02185	0.67	+1.2
2,286,310	-		MPMX19_02185	0.67	-0.8
2,286,471	+				-2.3
2,286,471	+				+0.0
2,286,471	+				-0.5
2,286,471	+				-1.1
2,286,472	-				-0.4
2,286,472	-				-1.1
2,286,472	-				-0.3
2,286,472	-				-1.1
2,286,473	+				-0.6
2,286,473	+				+0.6
2,286,473	+				-1.6
2,286,474	-				-0.3
2,286,541	+				-0.4
2,286,541	+				-1.3
2,286,541	+				-0.1
2,286,541	+				-1.3
2,286,542	-				-1.1
2,286,542	-				-1.7
2,286,542	-				+0.9
2,286,542	-				+0.7
2,286,542	-				+0.9
2,286,596	+				+0.9
2,286,596	+				-1.8
2,286,597	-				+0.4
2,286,842	+				+0.2
2,286,842	+				-2.1
2,286,842	+				-0.1
2,286,842	+				-0.1
2,286,842	+				-1.1