Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02090

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
2,187,534	-				+0.9
2,187,602	+				-0.2
2,187,602	+				-1.2
2,187,603	-				-1.4
2,187,606	+				+0.1
2,187,606	+				+0.1
2,187,606	+				-1.9
2,187,606	+				-1.3
2,187,606	+				-1.8
2,187,606	+				-1.8
2,187,606	+				+0.3
2,187,606	+				-1.1
2,187,606	+				+0.1
2,187,606	+				-0.5
2,187,607	-				+0.1
2,187,607	-				-0.5
2,187,607	-				-0.8
2,187,607	-				-1.8
2,187,607	-				-2.3
2,187,607	-				+0.7
2,187,635	+				-0.5
2,187,635	+				+0.5
2,187,635	+				+1.9
2,187,635	+				-1.2
2,187,731	+				+0.7
2,187,731	+				-0.7
2,187,731	+				-0.0
2,187,731	+				-0.9
2,187,731	+				-0.8
2,187,731	+				-0.5
2,187,731	+				-0.5
2,187,731	+				-0.0
2,187,731	+				-0.3
2,187,731	+				-0.5
2,188,316	+		MPMX19_02089	0.75	+0.0
2,188,317	-		MPMX19_02089	0.75	-0.9
2,188,376	+		MPMX19_02089	0.82	-0.5
2,188,376	+		MPMX19_02089	0.82	-0.4
2,188,376	+		MPMX19_02089	0.82	-0.1
2,188,376	+		MPMX19_02089	0.82	+0.1
2,188,376	+		MPMX19_02089	0.82	-0.1
2,188,376	+		MPMX19_02089	0.82	-2.2
2,188,376	+		MPMX19_02089	0.82	-1.5
2,188,376	+		MPMX19_02089	0.82	-0.6
2,188,377	-		MPMX19_02089	0.82	-0.5
2,188,377	-		MPMX19_02089	0.82	+1.1
2,188,377	-		MPMX19_02089	0.82	+0.5
2,188,377	-		MPMX19_02089	0.82	+2.5
2,188,377	-		MPMX19_02089	0.82	-0.2
2,188,843	+		MPMX19_02090	0.17	-0.3
2,188,843	+		MPMX19_02090	0.17	+0.4
2,188,843	+		MPMX19_02090	0.17	-0.0
2,188,843	+		MPMX19_02090	0.17	+1.1
2,188,843	+		MPMX19_02090	0.17	-0.5
2,188,843	+		MPMX19_02090	0.17	-2.3
2,188,843	+		MPMX19_02090	0.17	-0.2
2,188,843	+		MPMX19_02090	0.17	-0.1
2,189,083	+		MPMX19_02090	0.30	-1.2
2,189,233	+		MPMX19_02090	0.38	+0.1
2,189,233	+		MPMX19_02090	0.38	-0.2
2,189,233	+		MPMX19_02090	0.38	+0.1
2,189,233	+		MPMX19_02090	0.38	-0.4
2,189,233	+		MPMX19_02090	0.38	-0.7
2,189,317	+		MPMX19_02090	0.42	+0.1
2,189,317	+		MPMX19_02090	0.42	+0.5
2,189,317	+		MPMX19_02090	0.42	+0.5
2,189,317	+		MPMX19_02090	0.42	-0.9
2,189,317	+		MPMX19_02090	0.42	-0.5
2,189,317	+		MPMX19_02090	0.42	-1.2
2,189,317	+		MPMX19_02090	0.42	+1.1
2,189,471	+		MPMX19_02090	0.50	+0.8
2,189,471	+		MPMX19_02090	0.50	+1.2
2,189,471	+		MPMX19_02090	0.50	-1.3
2,189,471	+		MPMX19_02090	0.50	+0.5
2,189,471	+		MPMX19_02090	0.50	-1.8
2,189,471	+		MPMX19_02090	0.50	-0.1
2,189,471	+		MPMX19_02090	0.50	-0.0
2,189,471	+		MPMX19_02090	0.50	+0.0
2,189,471	+		MPMX19_02090	0.50	+0.9
2,189,471	+		MPMX19_02090	0.50	+1.1
2,189,471	+		MPMX19_02090	0.50	+0.6
2,189,471	+		MPMX19_02090	0.50	+0.0
2,189,471	+		MPMX19_02090	0.50	-0.5
2,189,471	+		MPMX19_02090	0.50	-0.2
2,189,471	+		MPMX19_02090	0.50	+0.1
2,189,471	+		MPMX19_02090	0.50	-0.2
2,189,471	+		MPMX19_02090	0.50	-0.0
2,189,471	+		MPMX19_02090	0.50	-0.4
2,189,471	+		MPMX19_02090	0.50	-0.2
2,189,472	-		MPMX19_02090	0.50	-1.6
2,189,473	+		MPMX19_02090	0.50	-0.4
2,189,473	+		MPMX19_02090	0.50	-0.0
2,189,473	+		MPMX19_02090	0.50	+0.7
2,189,473	+		MPMX19_02090	0.50	+0.2
2,189,473	+		MPMX19_02090	0.50	-0.9
2,189,473	+		MPMX19_02090	0.50	-1.8
2,189,473	+		MPMX19_02090	0.50	-1.0
2,189,473	+		MPMX19_02090	0.50	-0.6
2,189,473	+		MPMX19_02090	0.50	-1.3
2,189,473	+		MPMX19_02090	0.50	-0.9
2,189,473	+		MPMX19_02090	0.50	+2.1
2,189,473	+		MPMX19_02090	0.50	-0.6
2,189,473	+		MPMX19_02090	0.50	-0.4
2,189,473	+		MPMX19_02090	0.50	-0.0
2,189,473	+		MPMX19_02090	0.50	-1.3
2,189,473	+		MPMX19_02090	0.50	+0.4
2,189,473	+		MPMX19_02090	0.50	-0.8
2,189,473	+		MPMX19_02090	0.50	+0.4
2,189,473	+		MPMX19_02090	0.50	-0.0
2,189,473	+		MPMX19_02090	0.50	+0.3
2,189,473	+		MPMX19_02090	0.50	-0.5
2,189,473	+		MPMX19_02090	0.50	-1.9
2,189,473	+		MPMX19_02090	0.50	+0.8
2,189,473	+		MPMX19_02090	0.50	-0.6
2,189,473	+		MPMX19_02090	0.50	-1.5
2,189,473	+		MPMX19_02090	0.50	+1.1
2,189,473	+		MPMX19_02090	0.50	+0.5
2,189,474	-		MPMX19_02090	0.50	-0.2
2,189,474	-		MPMX19_02090	0.50	+0.1
2,190,187	+		MPMX19_02090	0.88	+0.3
2,190,187	+		MPMX19_02090	0.88	+0.6
2,190,187	+		MPMX19_02090	0.88	+1.0
2,190,187	+		MPMX19_02090	0.88	-1.2
2,190,187	+		MPMX19_02090	0.88	-0.7
2,190,187	+		MPMX19_02090	0.88	+1.3
2,190,187	+		MPMX19_02090	0.88	+0.5
2,190,187	+		MPMX19_02090	0.88	+1.5
2,190,187	+		MPMX19_02090	0.88	+0.3
2,190,188	-		MPMX19_02090	0.88	+1.4
2,190,188	-		MPMX19_02090	0.88	+0.5
2,190,328	+				-2.3
2,190,328	+				+0.8
2,190,328	+				+0.1
2,190,328	+				-1.2
2,190,328	+				-0.4
2,190,328	+				-0.7
2,190,328	+				-0.6
2,190,328	+				-3.8
2,190,329	-				-0.1
2,190,329	-				-0.2
2,190,329	-				-0.7
2,190,650	+		MPMX19_02091	0.39	-1.6
2,190,650	+		MPMX19_02091	0.39	-0.2
2,190,650	+		MPMX19_02091	0.39	-0.4
2,190,650	+		MPMX19_02091	0.39	+0.6
2,190,650	+		MPMX19_02091	0.39	-0.6
2,190,650	+		MPMX19_02091	0.39	-1.0
2,190,785	+		MPMX19_02091	0.63	-0.5
2,190,785	+		MPMX19_02091	0.63	+0.2
2,190,785	+		MPMX19_02091	0.63	+0.4
2,190,785	+		MPMX19_02091	0.63	-1.4
2,190,785	+		MPMX19_02091	0.63	-1.4
2,190,885	-		MPMX19_02091	0.80	+0.5
2,191,244	+		MPMX19_02092	0.61	+0.1
2,191,244	+		MPMX19_02092	0.61	+1.1
2,191,244	+		MPMX19_02092	0.61	-0.0
2,191,286	+		MPMX19_02092	0.76	+0.0
2,191,286	+		MPMX19_02092	0.76	-0.2
2,191,286	+		MPMX19_02092	0.76	+0.5
2,191,286	+		MPMX19_02092	0.76	-0.6
2,191,286	+		MPMX19_02092	0.76	+0.1
2,191,286	+		MPMX19_02092	0.76	-0.5
2,191,286	+		MPMX19_02092	0.76	+0.1
2,191,286	+		MPMX19_02092	0.76	-0.5
2,191,286	+		MPMX19_02092	0.76	-1.2
2,191,313	+		MPMX19_02092	0.86	-0.7
2,191,313	+		MPMX19_02092	0.86	+0.9
2,191,343	+				+0.7
2,191,343	+				+1.4
2,191,344	-				-1.3
2,191,344	-				-0.7