Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01997

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
2,084,037	+				-0.2
2,084,037	+				-0.5
2,084,037	+				+0.2
2,084,038	-				-1.1
2,084,038	-				-0.7
2,084,038	-				-2.6
2,084,092	+				+2.1
2,084,092	+				-0.4
2,084,092	+				-1.6
2,084,099	+				-0.2
2,084,099	+				-0.5
2,084,099	+				-0.1
2,084,473	-		MPMX19_01997	0.23	-1.4
2,084,997	+		MPMX19_01997	0.60	+0.1
2,085,361	-		MPMX19_01997	0.85	+0.5
2,085,610	+				+1.3
2,085,610	+				+0.1
2,085,611	-				-0.9
2,085,613	+				+0.5
2,085,613	+				-0.4
2,085,613	+				+0.9
2,085,613	+				+1.1
2,085,614	-				-1.2
2,085,614	-				-0.6
2,085,645	+				-0.4
2,085,679	+				-1.0
2,085,817	+				+0.5
2,085,817	+				+0.3
2,085,817	+				-1.5
2,085,817	+				-0.2
2,085,817	+				+1.1
2,085,817	+				+1.1
2,085,817	+				+1.1
2,085,818	-				+0.3
2,085,818	-				-1.1
2,085,818	-				-0.7
2,085,818	-				-1.4
2,085,818	-				+0.5
2,085,818	-				-2.0
2,085,818	-				+0.5
2,085,818	-				-0.5
2,085,818	-				+0.5
2,085,818	-				+2.1
2,085,820	-				+0.9
2,086,030	+		MPMX19_01998	0.21	-1.5
2,086,031	-		MPMX19_01998	0.21	-0.2
2,086,336	+		MPMX19_01998	0.43	+0.5
2,086,336	+		MPMX19_01998	0.43	-0.5
2,086,336	+		MPMX19_01998	0.43	-1.2
2,086,337	-		MPMX19_01998	0.43	+0.5
2,086,337	-		MPMX19_01998	0.43	+0.1
2,086,337	-		MPMX19_01998	0.43	+1.0
2,086,337	-		MPMX19_01998	0.43	-0.1
2,086,337	-		MPMX19_01998	0.43	-0.5
2,086,465	+		MPMX19_01998	0.52	+1.5
2,086,465	+		MPMX19_01998	0.52	+0.1
2,086,466	-		MPMX19_01998	0.52	+0.1
2,086,466	-		MPMX19_01998	0.52	-1.1
2,086,466	-		MPMX19_01998	0.52	+1.5
2,086,466	-		MPMX19_01998	0.52	-2.0
2,086,466	-		MPMX19_01998	0.52	-0.2
2,086,522	+		MPMX19_01998	0.56	+0.3
2,086,558	+		MPMX19_01998	0.59	-1.1
2,086,558	+		MPMX19_01998	0.59	+0.8
2,086,558	+		MPMX19_01998	0.59	-0.5
2,086,558	+		MPMX19_01998	0.59	-1.4
2,086,559	-		MPMX19_01998	0.59	+0.5
2,086,559	-		MPMX19_01998	0.59	+0.5
2,086,559	-		MPMX19_01998	0.59	-0.5
2,086,559	-		MPMX19_01998	0.59	-0.3
2,086,559	-		MPMX19_01998	0.59	-0.1