Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01974

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
2,056,638	-		MPMX19_01973	0.66	-0.4
2,057,097	+				+1.3
2,057,097	+				+0.7
2,057,097	+				-1.3
2,057,166	+				-0.7
2,057,166	+				-1.5
2,057,166	+				+0.4
2,057,167	-				-0.7
2,057,167	-				+0.2
2,057,167	-				+1.4
2,057,167	-				-1.8
2,057,167	-				+0.7
2,057,225	+				+1.7
2,057,225	+				+0.6
2,057,225	+				-0.9
2,057,225	+				+0.2
2,057,226	-				-0.7
2,057,226	-				+0.3
2,057,226	-				+0.7
2,057,226	-				-1.3
2,057,226	-				-1.8
2,057,226	-				-1.3
2,057,226	-				-0.7
2,057,411	+		MPMX19_01974	0.12	+0.3
2,057,411	+		MPMX19_01974	0.12	-0.2
2,057,411	+		MPMX19_01974	0.12	-0.8
2,057,411	+		MPMX19_01974	0.12	+0.1
2,057,411	+		MPMX19_01974	0.12	+0.2
2,057,411	+		MPMX19_01974	0.12	-0.7
2,057,412	-		MPMX19_01974	0.13	-1.1
2,057,412	-		MPMX19_01974	0.13	+0.5
2,057,804	-		MPMX19_01974	0.40	-0.5
2,057,884	+		MPMX19_01974	0.45	+0.1
2,057,884	+		MPMX19_01974	0.45	-0.5
2,057,884	+		MPMX19_01974	0.45	-0.0
2,057,884	+		MPMX19_01974	0.45	-1.3
2,057,884	+		MPMX19_01974	0.45	-0.7
2,057,884	+		MPMX19_01974	0.45	-1.4
2,057,884	+		MPMX19_01974	0.45	-0.4
2,057,884	+		MPMX19_01974	0.45	+0.2
2,057,884	+		MPMX19_01974	0.45	-0.1
2,057,884	+		MPMX19_01974	0.45	-0.3
2,057,884	+		MPMX19_01974	0.45	-0.5
2,057,884	+		MPMX19_01974	0.45	+1.1
2,057,884	+		MPMX19_01974	0.45	-1.1
2,057,884	+		MPMX19_01974	0.45	+1.1
2,057,884	+		MPMX19_01974	0.45	-0.7
2,057,884	+		MPMX19_01974	0.45	-0.6
2,057,884	+		MPMX19_01974	0.45	+0.7
2,057,884	+		MPMX19_01974	0.45	-0.9
2,057,884	+		MPMX19_01974	0.45	-0.5
2,057,884	+		MPMX19_01974	0.45	-0.4
2,057,884	+		MPMX19_01974	0.45	-1.2
2,057,884	+		MPMX19_01974	0.45	+0.7
2,057,884	+		MPMX19_01974	0.45	-0.7
2,057,884	+		MPMX19_01974	0.45	-0.0
2,057,884	+		MPMX19_01974	0.45	-0.3
2,057,885	-		MPMX19_01974	0.46	-1.4
2,057,885	-		MPMX19_01974	0.46	+0.1
2,057,885	-		MPMX19_01974	0.46	-3.2
2,057,885	-		MPMX19_01974	0.46	-0.1
2,057,885	-		MPMX19_01974	0.46	+2.5
2,057,885	-		MPMX19_01974	0.46	+0.5
2,057,885	-		MPMX19_01974	0.46	-1.1
2,057,885	-		MPMX19_01974	0.46	-0.9
2,057,885	-		MPMX19_01974	0.46	+1.1
2,057,885	-		MPMX19_01974	0.46	-1.6
2,057,885	-		MPMX19_01974	0.46	-0.1
2,057,885	-		MPMX19_01974	0.46	+0.1
2,057,885	-		MPMX19_01974	0.46	-1.0
2,057,885	-		MPMX19_01974	0.46	-0.8
2,057,885	-		MPMX19_01974	0.46	+0.1
2,057,885	-		MPMX19_01974	0.46	+0.1
2,057,885	-		MPMX19_01974	0.46	-0.7
2,057,885	-		MPMX19_01974	0.46	-1.6
2,057,885	-		MPMX19_01974	0.46	-1.3
2,057,885	-		MPMX19_01974	0.46	-1.1
2,057,885	-		MPMX19_01974	0.46	+0.1
2,057,885	-		MPMX19_01974	0.46	-0.6
2,057,885	-		MPMX19_01974	0.46	+0.1
2,057,885	-		MPMX19_01974	0.46	-0.3
2,057,885	-		MPMX19_01974	0.46	-0.9
2,057,885	-		MPMX19_01974	0.46	-1.1
2,057,886	+		MPMX19_01974	0.46	-0.3
2,057,886	+		MPMX19_01974	0.46	+0.5
2,057,886	+		MPMX19_01974	0.46	+0.0
2,057,886	+		MPMX19_01974	0.46	-0.9
2,057,886	+		MPMX19_01974	0.46	-0.4
2,057,887	-		MPMX19_01974	0.46	-0.5
2,057,887	-		MPMX19_01974	0.46	-0.3
2,057,887	-		MPMX19_01974	0.46	+0.7
2,057,887	-		MPMX19_01974	0.46	-0.3
2,057,887	-		MPMX19_01974	0.46	+0.7
2,057,887	-		MPMX19_01974	0.46	+0.2
2,057,887	-		MPMX19_01974	0.46	-1.0
2,057,887	-		MPMX19_01974	0.46	+0.5
2,057,887	-		MPMX19_01974	0.46	-1.1
2,057,887	-		MPMX19_01974	0.46	+0.4
2,057,887	-		MPMX19_01974	0.46	-1.1
2,058,076	+		MPMX19_01974	0.59	-1.3
2,058,076	+		MPMX19_01974	0.59	+1.7
2,058,076	+		MPMX19_01974	0.59	-1.1
2,058,077	-		MPMX19_01974	0.59	-0.9
2,058,077	-		MPMX19_01974	0.59	-1.3
2,058,077	-		MPMX19_01974	0.59	+0.2
2,058,145	+		MPMX19_01974	0.64	-0.5
2,058,145	+		MPMX19_01974	0.64	-0.9
2,058,145	+		MPMX19_01974	0.64	+0.8
2,058,145	+		MPMX19_01974	0.64	-0.3
2,058,146	-		MPMX19_01974	0.64	+1.1
2,058,146	-		MPMX19_01974	0.64	-1.1
2,058,146	-		MPMX19_01974	0.64	-0.1
2,058,146	-		MPMX19_01974	0.64	-1.9
2,058,146	-		MPMX19_01974	0.64	-0.5
2,058,146	-		MPMX19_01974	0.64	+1.1
2,058,184	+		MPMX19_01974	0.66	-3.0
2,058,184	+		MPMX19_01974	0.66	-0.3
2,058,184	+		MPMX19_01974	0.66	-1.7
2,058,184	+		MPMX19_01974	0.66	+0.1
2,058,184	+		MPMX19_01974	0.66	-0.9
2,058,184	+		MPMX19_01974	0.66	-1.0
2,058,184	+		MPMX19_01974	0.66	-0.6
2,058,184	+		MPMX19_01974	0.66	-1.1
2,058,184	+		MPMX19_01974	0.66	+0.3
2,058,184	+		MPMX19_01974	0.66	-0.0
2,058,184	+		MPMX19_01974	0.66	-1.4
2,058,184	+		MPMX19_01974	0.66	-1.3
2,058,184	+		MPMX19_01974	0.66	-2.2
2,058,184	+		MPMX19_01974	0.66	+0.5
2,058,185	-		MPMX19_01974	0.67	-0.3
2,058,185	-		MPMX19_01974	0.67	-2.0
2,058,185	-		MPMX19_01974	0.67	-0.7
2,058,185	-		MPMX19_01974	0.67	+0.7
2,058,185	-		MPMX19_01974	0.67	-0.4
2,058,185	-		MPMX19_01974	0.67	+2.1
2,058,185	-		MPMX19_01974	0.67	-1.6
2,058,185	-		MPMX19_01974	0.67	-0.5
2,058,185	-		MPMX19_01974	0.67	-0.1
2,058,185	-		MPMX19_01974	0.67	-0.5
2,058,185	-		MPMX19_01974	0.67	+0.5
2,058,185	-		MPMX19_01974	0.67	-0.3
2,058,205	+		MPMX19_01974	0.68	-0.4
2,058,205	+		MPMX19_01974	0.68	-0.5
2,058,205	+		MPMX19_01974	0.68	+1.7
2,058,205	+		MPMX19_01974	0.68	+1.1
2,058,205	+		MPMX19_01974	0.68	+0.7
2,058,205	+		MPMX19_01974	0.68	+0.2
2,058,205	+		MPMX19_01974	0.68	-0.6
2,058,205	+		MPMX19_01974	0.68	-0.2
2,058,205	+		MPMX19_01974	0.68	+0.3
2,058,206	-		MPMX19_01974	0.68	-0.7
2,058,206	-		MPMX19_01974	0.68	-0.9
2,058,206	-		MPMX19_01974	0.68	-0.9
2,058,206	-		MPMX19_01974	0.68	+0.3
2,058,206	-		MPMX19_01974	0.68	-1.5
2,058,206	-		MPMX19_01974	0.68	-0.7
2,058,373	+		MPMX19_01974	0.80	-0.5
2,058,373	+		MPMX19_01974	0.80	-0.8
2,058,373	+		MPMX19_01974	0.80	-0.9
2,058,373	+		MPMX19_01974	0.80	+1.1
2,058,373	+		MPMX19_01974	0.80	-1.1
2,058,373	+		MPMX19_01974	0.80	-1.1
2,058,373	+		MPMX19_01974	0.80	-0.6
2,058,373	+		MPMX19_01974	0.80	-1.3
2,058,373	+		MPMX19_01974	0.80	+0.9
2,058,374	-		MPMX19_01974	0.80	-0.9
2,058,374	-		MPMX19_01974	0.80	+0.3
2,058,374	-		MPMX19_01974	0.80	-1.2
2,058,374	-		MPMX19_01974	0.80	-0.0
2,058,374	-		MPMX19_01974	0.80	-1.3
2,058,374	-		MPMX19_01974	0.80	+0.3
2,058,374	-		MPMX19_01974	0.80	+0.8
2,058,374	-		MPMX19_01974	0.80	+0.3
2,058,374	-		MPMX19_01974	0.80	-0.9
2,058,374	-		MPMX19_01974	0.80	+0.8
2,058,374	-		MPMX19_01974	0.80	+1.0
2,058,427	+		MPMX19_01974	0.83	-1.5
2,058,428	-		MPMX19_01974	0.84	-0.6
2,058,428	-		MPMX19_01974	0.84	-1.3
2,058,428	-		MPMX19_01974	0.84	-0.6
2,058,428	-		MPMX19_01974	0.84	+0.1
2,058,580	+				-0.9
2,058,580	+				-2.6
2,058,580	+				+0.5
2,058,581	-				+0.4
2,058,581	-				-0.1
2,058,581	-				-2.7
2,058,808	+				+1.1