Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01963

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
2,043,740	+		MPMX19_01961	0.23	-0.2
2,043,740	+		MPMX19_01961	0.23	-1.5
2,043,740	+		MPMX19_01961	0.23	-0.1
2,043,741	-		MPMX19_01961	0.23	-1.8
2,043,741	-		MPMX19_01961	0.23	-0.4
2,043,741	-		MPMX19_01961	0.23	-1.2
2,043,741	-		MPMX19_01961	0.23	-0.2
2,043,881	+		MPMX19_01961	0.52	+0.1
2,043,882	-		MPMX19_01961	0.52	+0.1
2,043,882	-		MPMX19_01961	0.52	-1.6
2,043,882	-		MPMX19_01961	0.52	-1.6
2,043,882	-		MPMX19_01961	0.52	-0.1
2,044,135	+				+0.4
2,044,135	+				+0.6
2,044,135	+				-0.3
2,044,136	-				+0.3
2,044,136	-				+0.4
2,044,136	-				-0.2
2,044,151	-				+0.3
2,044,151	-				+0.5
2,044,151	-				+0.9
2,044,151	-				-1.0
2,044,151	-				-0.7
2,044,279	+		MPMX19_01962	0.35	+0.0
2,044,279	+		MPMX19_01962	0.35	+0.1
2,044,279	+		MPMX19_01962	0.35	-0.8
2,044,279	+		MPMX19_01962	0.35	-0.8
2,044,279	+		MPMX19_01962	0.35	-0.0
2,044,279	+		MPMX19_01962	0.35	+0.3
2,044,279	+		MPMX19_01962	0.35	+0.7
2,044,279	+		MPMX19_01962	0.35	-1.4
2,044,279	+		MPMX19_01962	0.35	+0.1
2,044,279	+		MPMX19_01962	0.35	+0.1
2,044,279	+		MPMX19_01962	0.35	+0.7
2,044,279	+		MPMX19_01962	0.35	-0.2
2,044,279	+		MPMX19_01962	0.35	+0.3
2,044,279	+		MPMX19_01962	0.35	-0.2
2,044,279	+		MPMX19_01962	0.35	-0.3
2,044,279	+		MPMX19_01962	0.35	-0.2
2,044,280	-		MPMX19_01962	0.36	-0.4
2,044,280	-		MPMX19_01962	0.36	+1.6
2,044,280	-		MPMX19_01962	0.36	-0.4
2,044,280	-		MPMX19_01962	0.36	-1.2
2,044,280	-		MPMX19_01962	0.36	-0.9
2,044,280	-		MPMX19_01962	0.36	-1.0
2,044,280	-		MPMX19_01962	0.36	+0.1
2,044,280	-		MPMX19_01962	0.36	+0.2
2,044,280	-		MPMX19_01962	0.36	-2.0
2,044,280	-		MPMX19_01962	0.36	+0.2
2,044,280	-		MPMX19_01962	0.36	+0.9
2,044,280	-		MPMX19_01962	0.36	-0.2
2,044,533	+				-0.4
2,044,533	+				-1.4
2,044,533	+				-1.0
2,044,533	+				-2.2
2,044,533	+				-1.2
2,044,533	+				-0.2
2,044,533	+				+1.5
2,044,533	+				+0.1
2,044,533	+				-0.2
2,044,533	+				+0.1
2,044,533	+				-0.1
2,044,533	+				-0.2
2,044,533	+				+0.6
2,044,533	+				-0.7
2,044,533	+				-0.5
2,044,533	+				-0.4
2,044,533	+				+0.3
2,044,533	+				+1.6
2,044,533	+				-0.4
2,044,533	+				-0.7
2,044,533	+				-0.1
2,044,533	+				-1.2
2,044,534	-				-0.2
2,044,534	-				-2.1
2,044,534	-				-0.2
2,044,534	-				-2.6
2,044,534	-				-0.2
2,044,534	-				-0.8
2,044,534	-				+0.3
2,044,534	-				-2.6
2,044,534	-				-2.3
2,044,534	-				-1.4
2,044,534	-				+0.7
2,044,534	-				+0.8
2,044,534	-				+0.5
2,044,534	-				+0.5
2,044,534	-				-0.9
2,044,534	-				+0.3
2,044,534	-				+0.5
2,044,534	-				-1.1
2,044,534	-				-0.9
2,044,534	-				-0.2
2,044,534	-				-1.1
2,044,534	-				-0.6
2,044,534	-				-0.8
2,044,615	-				+0.4
2,044,840	+		MPMX19_01963	0.23	-1.5
2,044,840	+		MPMX19_01963	0.23	-0.4
2,044,840	+		MPMX19_01963	0.23	+0.1
2,044,840	+		MPMX19_01963	0.23	-1.5
2,044,841	-		MPMX19_01963	0.23	+0.5
2,044,841	-		MPMX19_01963	0.23	-0.5
2,044,841	-		MPMX19_01963	0.23	-0.7
2,044,841	-		MPMX19_01963	0.23	-0.7
2,044,852	+		MPMX19_01963	0.24	-0.6
2,044,853	-		MPMX19_01963	0.24	-0.7
2,044,853	-		MPMX19_01963	0.24	+0.6
2,044,853	-		MPMX19_01963	0.24	-1.4
2,044,921	+		MPMX19_01963	0.30	-1.6
2,044,921	+		MPMX19_01963	0.30	-0.2
2,044,921	+		MPMX19_01963	0.30	+1.1
2,044,921	+		MPMX19_01963	0.30	-0.6
2,044,921	+		MPMX19_01963	0.30	+0.3
2,044,921	+		MPMX19_01963	0.30	+0.9
2,044,921	+		MPMX19_01963	0.30	-0.6
2,044,921	+		MPMX19_01963	0.30	-1.7
2,044,921	+		MPMX19_01963	0.30	-1.1
2,044,921	+		MPMX19_01963	0.30	+0.5
2,044,921	+		MPMX19_01963	0.30	-0.4
2,044,921	+		MPMX19_01963	0.30	-2.0
2,044,922	-		MPMX19_01963	0.30	-0.1
2,044,922	-		MPMX19_01963	0.30	-1.2
2,044,922	-		MPMX19_01963	0.30	-1.7
2,044,922	-		MPMX19_01963	0.30	-0.3
2,044,922	-		MPMX19_01963	0.30	-0.9
2,045,017	+		MPMX19_01963	0.39	-0.1
2,045,017	+		MPMX19_01963	0.39	-0.7
2,045,017	+		MPMX19_01963	0.39	+0.4
2,045,017	+		MPMX19_01963	0.39	-0.8
2,045,017	+		MPMX19_01963	0.39	-0.3
2,045,017	+		MPMX19_01963	0.39	-2.2
2,045,017	+		MPMX19_01963	0.39	-0.8
2,045,017	+		MPMX19_01963	0.39	-0.1
2,045,017	+		MPMX19_01963	0.39	+0.5
2,045,017	+		MPMX19_01963	0.39	-0.9
2,045,017	+		MPMX19_01963	0.39	-0.2
2,045,017	+		MPMX19_01963	0.39	+0.1
2,045,017	+		MPMX19_01963	0.39	-1.6
2,045,017	+		MPMX19_01963	0.39	-1.1
2,045,017	+		MPMX19_01963	0.39	-1.8
2,045,017	+		MPMX19_01963	0.39	-0.1
2,045,017	+		MPMX19_01963	0.39	-1.6
2,045,017	+		MPMX19_01963	0.39	-0.1
2,045,017	+		MPMX19_01963	0.39	-1.2
2,045,017	+		MPMX19_01963	0.39	-0.9
2,045,017	+		MPMX19_01963	0.39	-1.8
2,045,017	+		MPMX19_01963	0.39	-1.4
2,045,017	+		MPMX19_01963	0.39	+0.7
2,045,017	+		MPMX19_01963	0.39	-0.4
2,045,017	+		MPMX19_01963	0.39	-1.4
2,045,017	+		MPMX19_01963	0.39	-0.1
2,045,017	+		MPMX19_01963	0.39	-0.1
2,045,017	+		MPMX19_01963	0.39	+0.6
2,045,017	+		MPMX19_01963	0.39	-2.2
2,045,017	+		MPMX19_01963	0.39	-1.3
2,045,017	+		MPMX19_01963	0.39	-0.2
2,045,018	-		MPMX19_01963	0.39	-0.5
2,045,018	-		MPMX19_01963	0.39	-0.7
2,045,018	-		MPMX19_01963	0.39	-0.0
2,045,018	-		MPMX19_01963	0.39	-0.4
2,045,018	-		MPMX19_01963	0.39	+1.1
2,045,018	-		MPMX19_01963	0.39	-1.4
2,045,018	-		MPMX19_01963	0.39	-0.5
2,045,018	-		MPMX19_01963	0.39	-1.0
2,045,018	-		MPMX19_01963	0.39	-0.7
2,045,018	-		MPMX19_01963	0.39	+0.5
2,045,018	-		MPMX19_01963	0.39	+0.3
2,045,018	-		MPMX19_01963	0.39	-0.1
2,045,018	-		MPMX19_01963	0.39	-1.2
2,045,018	-		MPMX19_01963	0.39	+0.8
2,045,018	-		MPMX19_01963	0.39	-0.1
2,045,018	-		MPMX19_01963	0.39	-1.8
2,045,018	-		MPMX19_01963	0.39	-1.0
2,045,018	-		MPMX19_01963	0.39	+0.2
2,045,018	-		MPMX19_01963	0.39	-0.2
2,045,018	-		MPMX19_01963	0.39	-1.4
2,045,018	-		MPMX19_01963	0.39	-0.1
2,045,018	-		MPMX19_01963	0.39	-3.1
2,045,018	-		MPMX19_01963	0.39	-1.5
2,045,018	-		MPMX19_01963	0.39	-0.2
2,045,018	-		MPMX19_01963	0.39	-0.6
2,045,018	-		MPMX19_01963	0.39	-0.7
2,045,018	-		MPMX19_01963	0.39	-1.6
2,045,018	-		MPMX19_01963	0.39	-0.4
2,045,018	-		MPMX19_01963	0.39	-1.4
2,045,018	-		MPMX19_01963	0.39	+0.2
2,045,018	-		MPMX19_01963	0.39	-0.8
2,045,050	+		MPMX19_01963	0.42	-0.5
2,045,050	+		MPMX19_01963	0.42	-0.7
2,045,050	+		MPMX19_01963	0.42	+0.2
2,045,050	+		MPMX19_01963	0.42	-1.9
2,045,050	+		MPMX19_01963	0.42	+0.1
2,045,050	+		MPMX19_01963	0.42	-0.6
2,045,050	+		MPMX19_01963	0.42	+1.3
2,045,050	+		MPMX19_01963	0.42	-1.1
2,045,050	+		MPMX19_01963	0.42	-2.2
2,045,050	+		MPMX19_01963	0.42	-0.5
2,045,050	+		MPMX19_01963	0.42	-0.2
2,045,050	+		MPMX19_01963	0.42	-1.2
2,045,050	+		MPMX19_01963	0.42	+0.5
2,045,050	+		MPMX19_01963	0.42	-1.2
2,045,050	+		MPMX19_01963	0.42	-0.2
2,045,050	+		MPMX19_01963	0.42	-2.0
2,045,050	+		MPMX19_01963	0.42	-0.4
2,045,050	+		MPMX19_01963	0.42	+0.2
2,045,050	+		MPMX19_01963	0.42	+0.1
2,045,050	+		MPMX19_01963	0.42	+0.2
2,045,050	+		MPMX19_01963	0.42	-0.1
2,045,050	+		MPMX19_01963	0.42	-1.2
2,045,050	+		MPMX19_01963	0.42	-0.2
2,045,050	+		MPMX19_01963	0.42	-0.5
2,045,050	+		MPMX19_01963	0.42	-0.7
2,045,050	+		MPMX19_01963	0.42	-2.2
2,045,050	+		MPMX19_01963	0.42	-0.5
2,045,050	+		MPMX19_01963	0.42	+0.2
2,045,050	+		MPMX19_01963	0.42	-2.0
2,045,050	+		MPMX19_01963	0.42	-0.9
2,045,050	+		MPMX19_01963	0.42	-1.2
2,045,050	+		MPMX19_01963	0.42	-0.1
2,045,050	+		MPMX19_01963	0.42	-0.6
2,045,050	+		MPMX19_01963	0.42	-0.9
2,045,050	+		MPMX19_01963	0.42	-0.9
2,045,050	+		MPMX19_01963	0.42	+0.1
2,045,051	-		MPMX19_01963	0.42	+1.9
2,045,051	-		MPMX19_01963	0.42	-0.7
2,045,051	-		MPMX19_01963	0.42	-0.9
2,045,051	-		MPMX19_01963	0.42	-2.0
2,045,051	-		MPMX19_01963	0.42	-1.2
2,045,051	-		MPMX19_01963	0.42	-1.7
2,045,051	-		MPMX19_01963	0.42	+0.1
2,045,051	-		MPMX19_01963	0.42	-1.1
2,045,051	-		MPMX19_01963	0.42	+1.1
2,045,051	-		MPMX19_01963	0.42	+0.3
2,045,051	-		MPMX19_01963	0.42	+0.7
2,045,051	-		MPMX19_01963	0.42	-1.1
2,045,051	-		MPMX19_01963	0.42	-0.0
2,045,051	-		MPMX19_01963	0.42	-0.2
2,045,051	-		MPMX19_01963	0.42	-0.4
2,045,051	-		MPMX19_01963	0.42	+1.1
2,045,051	-		MPMX19_01963	0.42	-0.4
2,045,051	-		MPMX19_01963	0.42	-0.3
2,045,051	-		MPMX19_01963	0.42	-1.0
2,045,051	-		MPMX19_01963	0.42	-1.0
2,045,051	-		MPMX19_01963	0.42	-1.4
2,045,051	-		MPMX19_01963	0.42	-0.5
2,045,051	-		MPMX19_01963	0.42	-1.1
2,045,051	-		MPMX19_01963	0.42	+0.3
2,045,051	-		MPMX19_01963	0.42	-1.6
2,045,051	-		MPMX19_01963	0.42	-0.3
2,045,051	-		MPMX19_01963	0.42	-0.9
2,045,051	-		MPMX19_01963	0.42	+0.3
2,045,051	-		MPMX19_01963	0.42	-0.4
2,045,051	-		MPMX19_01963	0.42	-0.3
2,045,051	-		MPMX19_01963	0.42	-0.9
2,045,056	+		MPMX19_01963	0.43	-1.9
2,045,056	+		MPMX19_01963	0.43	-0.7
2,045,056	+		MPMX19_01963	0.43	-1.4
2,045,056	+		MPMX19_01963	0.43	+0.1
2,045,056	+		MPMX19_01963	0.43	+0.7
2,045,056	+		MPMX19_01963	0.43	+0.0
2,045,057	-		MPMX19_01963	0.43	-1.4
2,045,057	-		MPMX19_01963	0.43	-1.5
2,045,057	-		MPMX19_01963	0.43	-0.7
2,045,057	-		MPMX19_01963	0.43	-0.1
2,045,057	-		MPMX19_01963	0.43	-1.1
2,045,206	+		MPMX19_01963	0.57	-2.0
2,045,206	+		MPMX19_01963	0.57	-0.2
2,045,206	+		MPMX19_01963	0.57	-0.4
2,045,206	+		MPMX19_01963	0.57	-1.6
2,045,206	+		MPMX19_01963	0.57	-1.7
2,045,206	+		MPMX19_01963	0.57	+0.3
2,045,207	-		MPMX19_01963	0.57	-0.2
2,045,207	-		MPMX19_01963	0.57	+0.1
2,045,207	-		MPMX19_01963	0.57	-0.1
2,045,207	-		MPMX19_01963	0.57	-1.5
2,045,207	-		MPMX19_01963	0.57	-0.6
2,045,233	+		MPMX19_01963	0.59	-0.9
2,045,233	+		MPMX19_01963	0.59	-1.6
2,045,233	+		MPMX19_01963	0.59	-0.1
2,045,233	+		MPMX19_01963	0.59	+0.3
2,045,234	-		MPMX19_01963	0.59	-0.4
2,045,234	-		MPMX19_01963	0.59	-0.5
2,045,234	-		MPMX19_01963	0.59	+0.1
2,045,234	-		MPMX19_01963	0.59	+0.5
2,045,234	-		MPMX19_01963	0.59	-0.5
2,045,668	+				-0.8
2,045,668	+				+0.3
2,045,668	+				+0.9
2,045,668	+				-0.3
2,045,668	+				+0.3
2,045,668	+				-0.2
2,045,668	+				+0.7
2,045,668	+				-0.4
2,045,668	+				+0.1
2,045,668	+				+0.3
2,045,668	+				-0.9
2,045,668	+				+0.5
2,045,668	+				+0.5
2,045,668	+				+0.3
2,045,668	+				-0.1
2,045,668	+				-1.5
2,045,668	+				+0.4
2,045,669	-				+0.9
2,045,669	-				-0.5
2,045,669	-				+1.7
2,045,669	-				-0.3
2,045,669	-				-1.6
2,045,669	-				-0.4
2,045,669	-				-1.2
2,045,669	-				+1.8
2,045,669	-				-0.1
2,045,669	-				-1.5
2,045,669	-				-1.7
2,045,669	-				-1.7
2,045,669	-				+1.1
2,045,669	-				+0.2
2,045,850	+		MPMX19_01964	0.80	-0.9
2,045,865	+		MPMX19_01964	0.87	-0.7
2,045,865	+		MPMX19_01964	0.87	-0.1
2,045,865	+		MPMX19_01964	0.87	-0.8
2,045,866	-		MPMX19_01964	0.88	-0.9
2,045,866	-		MPMX19_01964	0.88	+1.5
2,045,866	-		MPMX19_01964	0.88	+1.0