Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01840

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,919,576	+		MPMX19_01839	0.39	+0.1
1,919,576	+		MPMX19_01839	0.39	-2.5
1,919,576	+		MPMX19_01839	0.39	+0.1
1,919,576	+		MPMX19_01839	0.39	+0.5
1,919,576	+		MPMX19_01839	0.39	-1.1
1,919,576	+		MPMX19_01839	0.39	+0.8
1,919,576	+		MPMX19_01839	0.39	-1.5
1,919,576	+		MPMX19_01839	0.39	-3.4
1,919,576	+		MPMX19_01839	0.39	-1.5
1,919,576	+		MPMX19_01839	0.39	+0.9
1,919,576	+		MPMX19_01839	0.39	+1.1
1,919,576	+		MPMX19_01839	0.39	-1.5
1,919,576	+		MPMX19_01839	0.39	-1.4
1,919,576	+		MPMX19_01839	0.39	+1.5
1,919,576	+		MPMX19_01839	0.39	+0.1
1,919,576	+		MPMX19_01839	0.39	-0.5
1,919,576	+		MPMX19_01839	0.39	-1.1
1,919,576	+		MPMX19_01839	0.39	+0.3
1,919,576	+		MPMX19_01839	0.39	-0.7
1,919,576	+		MPMX19_01839	0.39	-0.6
1,919,577	-		MPMX19_01839	0.39	-0.0
1,919,577	-		MPMX19_01839	0.39	+0.4
1,919,577	-		MPMX19_01839	0.39	+0.5
1,919,577	-		MPMX19_01839	0.39	-0.6
1,919,577	-		MPMX19_01839	0.39	-0.0
1,919,577	-		MPMX19_01839	0.39	-0.1
1,919,577	-		MPMX19_01839	0.39	+0.8
1,919,577	-		MPMX19_01839	0.39	-0.9
1,919,577	-		MPMX19_01839	0.39	-1.0
1,919,577	-		MPMX19_01839	0.39	-0.6
1,919,577	-		MPMX19_01839	0.39	-0.5
1,919,577	-		MPMX19_01839	0.39	-0.0
1,919,577	-		MPMX19_01839	0.39	-1.2
1,919,577	-		MPMX19_01839	0.39	+0.3
1,919,577	-		MPMX19_01839	0.39	-0.6
1,919,577	-		MPMX19_01839	0.39	+0.8
1,919,577	-		MPMX19_01839	0.39	-0.2
1,919,577	-		MPMX19_01839	0.39	+0.1
1,919,801	+		MPMX19_01839	0.70	-0.6
1,919,801	+		MPMX19_01839	0.70	-0.2
1,919,801	+		MPMX19_01839	0.70	+0.5
1,919,801	+		MPMX19_01839	0.70	+0.1
1,919,802	-		MPMX19_01839	0.70	-1.2
1,919,802	-		MPMX19_01839	0.70	-1.8
1,919,802	-		MPMX19_01839	0.70	+0.5
1,919,807	+		MPMX19_01839	0.70	-1.4
1,919,807	+		MPMX19_01839	0.70	-1.6
1,919,807	+		MPMX19_01839	0.70	+0.2
1,919,807	+		MPMX19_01839	0.70	-0.4
1,919,807	+		MPMX19_01839	0.70	-0.6
1,919,807	+		MPMX19_01839	0.70	-1.5
1,919,807	+		MPMX19_01839	0.70	+1.1
1,919,807	+		MPMX19_01839	0.70	-1.8
1,919,807	+		MPMX19_01839	0.70	-0.0
1,919,807	+		MPMX19_01839	0.70	-1.0
1,919,807	+		MPMX19_01839	0.70	+0.4
1,919,807	+		MPMX19_01839	0.70	-0.2
1,919,807	+		MPMX19_01839	0.70	-0.4
1,919,807	+		MPMX19_01839	0.70	-0.1
1,919,807	+		MPMX19_01839	0.70	-0.9
1,919,807	+		MPMX19_01839	0.70	-1.1
1,919,807	+		MPMX19_01839	0.70	-1.4
1,919,807	+		MPMX19_01839	0.70	+0.1
1,919,807	+		MPMX19_01839	0.70	-1.2
1,919,807	+		MPMX19_01839	0.70	-0.2
1,919,807	+		MPMX19_01839	0.70	-0.9
1,919,807	+		MPMX19_01839	0.70	-0.5
1,919,807	+		MPMX19_01839	0.70	-0.6
1,919,808	-		MPMX19_01839	0.71	-1.1
1,919,808	-		MPMX19_01839	0.71	+1.4
1,919,808	-		MPMX19_01839	0.71	+1.7
1,919,808	-		MPMX19_01839	0.71	+1.8
1,919,808	-		MPMX19_01839	0.71	-1.1
1,919,808	-		MPMX19_01839	0.71	-0.2
1,919,808	-		MPMX19_01839	0.71	-0.4
1,919,808	-		MPMX19_01839	0.71	-0.1
1,919,808	-		MPMX19_01839	0.71	+0.1
1,919,808	-		MPMX19_01839	0.71	+0.5
1,919,808	-		MPMX19_01839	0.71	+0.2
1,919,808	-		MPMX19_01839	0.71	-1.0
1,919,808	-		MPMX19_01839	0.71	-0.6
1,919,808	-		MPMX19_01839	0.71	-1.4
1,919,808	-		MPMX19_01839	0.71	-0.2
1,919,808	-		MPMX19_01839	0.71	-0.5
1,919,820	+		MPMX19_01839	0.72	-1.1
1,919,820	+		MPMX19_01839	0.72	-2.2
1,919,821	-		MPMX19_01839	0.72	+0.1
1,919,821	-		MPMX19_01839	0.72	-1.2
1,919,821	-		MPMX19_01839	0.72	-2.2
1,919,928	+		MPMX19_01839	0.87	-0.8
1,919,928	+		MPMX19_01839	0.87	-1.0
1,920,024	+				+0.1
1,920,024	+				+0.5
1,920,024	+				-1.1
1,920,024	+				-2.0
1,920,024	+				-1.4
1,920,024	+				-1.5
1,920,024	+				-0.4
1,920,024	+				+0.5
1,920,024	+				-2.2
1,920,024	+				-0.9
1,920,024	+				-2.1
1,920,024	+				-0.2
1,920,024	+				-0.5
1,920,024	+				-1.7
1,920,024	+				+0.1
1,920,024	+				+0.7
1,920,024	+				-1.3
1,920,024	+				-1.5
1,920,024	+				+0.5
1,920,024	+				-1.1
1,920,024	+				-0.1
1,920,025	-				+1.2
1,920,025	-				+0.2
1,920,025	-				-1.9
1,920,025	-				-1.1
1,920,025	-				-1.0
1,920,025	-				-0.5
1,920,025	-				+0.9
1,920,025	-				-0.6
1,920,039	+				+0.5
1,920,040	-				-0.3
1,920,057	+				-1.4
1,920,057	+				-0.8
1,920,057	+				+0.1
1,920,057	+				+0.2
1,920,057	+				-0.5
1,920,057	+				-0.9
1,920,058	-				-0.5
1,920,058	-				-1.3
1,920,058	-				-0.7
1,920,061	-				-0.7
1,920,089	+				-0.3
1,920,089	+				-0.9
1,920,090	-				-0.0
1,920,110	+				+0.1
1,920,110	+				-0.9
1,920,111	-				+0.3
1,920,117	+				-1.1
1,920,117	+				-1.2
1,920,118	-				+0.3
1,920,118	-				-0.6
1,920,118	-				+0.5
1,920,118	-				-0.3
1,920,177	+				-1.8
1,920,177	+				-0.4
1,920,177	+				+1.1
1,920,177	+				-0.4
1,920,177	+				-0.5
1,920,177	+				-0.5
1,920,177	+				+0.3
1,920,177	+				+2.6
1,920,177	+				-1.8
1,920,177	+				+0.5
1,920,178	-				+0.9
1,920,178	-				-1.7
1,920,178	-				-1.8
1,920,178	-				-0.6
1,920,178	-				-0.1
1,920,178	-				-0.9
1,920,178	-				-1.3
1,920,178	-				-0.5
1,920,178	-				-1.7
1,920,178	-				-0.3
1,920,178	-				+0.9
1,920,178	-				+0.3
1,920,178	-				+0.6
1,920,178	-				-1.5
1,920,277	-				-0.2
1,920,430	+				-1.2
1,920,430	+				-0.5
1,920,430	+				-0.5
1,920,430	+				-1.1
1,920,430	+				-0.7
1,920,430	+				-1.8
1,920,431	-				+1.3
1,920,431	-				+0.3
1,920,431	-				-0.5
1,920,431	-				+1.7
1,920,431	-				-0.5
1,920,505	+				+1.1
1,920,505	+				+0.9
1,920,505	+				+0.2
1,920,505	+				-0.2
1,920,506	-				-1.1
1,920,506	-				-0.2
1,920,506	-				-0.2
1,920,506	-				-1.0
1,920,506	-				-1.7
1,920,506	-				-2.3
1,920,506	-				-0.3
1,920,535	+				-0.5
1,920,535	+				+1.3
1,920,535	+				-1.2
1,920,535	+				+0.3
1,920,535	+				+0.1
1,920,535	+				-1.5
1,920,535	+				+0.7
1,920,535	+				-0.6
1,920,535	+				-0.2
1,920,535	+				-1.5
1,920,536	-				+0.3
1,920,536	-				-0.7
1,920,536	-				+1.4
1,920,536	-				-1.9
1,920,536	-				+0.5
1,920,536	-				-1.2
1,920,536	-				-1.0
1,920,536	-				+0.5
1,920,536	-				-0.9
1,920,616	+		MPMX19_01840	0.13	-0.8
1,920,616	+		MPMX19_01840	0.13	-1.5
1,920,616	+		MPMX19_01840	0.13	+0.7
1,920,616	+		MPMX19_01840	0.13	-0.9
1,920,616	+		MPMX19_01840	0.13	+0.5
1,920,616	+		MPMX19_01840	0.13	-0.6
1,920,616	+		MPMX19_01840	0.13	-1.2
1,920,616	+		MPMX19_01840	0.13	+0.2
1,920,617	-		MPMX19_01840	0.13	-0.4
1,920,617	-		MPMX19_01840	0.13	-0.7
1,920,617	-		MPMX19_01840	0.13	-1.2
1,920,617	-		MPMX19_01840	0.13	-0.4
1,920,617	-		MPMX19_01840	0.13	-0.0
1,920,617	-		MPMX19_01840	0.13	+0.1
1,920,617	-		MPMX19_01840	0.13	+0.5
1,920,617	-		MPMX19_01840	0.13	-0.4
1,920,617	-		MPMX19_01840	0.13	-0.5
1,920,617	-		MPMX19_01840	0.13	-1.2
1,920,617	-		MPMX19_01840	0.13	-0.7
1,920,617	-		MPMX19_01840	0.13	-1.7
1,920,617	-		MPMX19_01840	0.13	+0.8
1,920,646	-		MPMX19_01840	0.14	-1.6
1,921,468	+		MPMX19_01840	0.57	-1.0
1,921,468	+		MPMX19_01840	0.57	+1.4
1,921,468	+		MPMX19_01840	0.57	-0.2
1,921,468	+		MPMX19_01840	0.57	-2.0
1,921,468	+		MPMX19_01840	0.57	+0.6
1,921,468	+		MPMX19_01840	0.57	+0.1
1,921,468	+		MPMX19_01840	0.57	-1.2
1,921,469	-		MPMX19_01840	0.57	-1.1
1,921,469	-		MPMX19_01840	0.57	+0.2
1,921,469	-		MPMX19_01840	0.57	-1.8
1,921,469	-		MPMX19_01840	0.57	+2.3
1,921,469	-		MPMX19_01840	0.57	+1.5
1,921,469	-		MPMX19_01840	0.57	+0.5
1,921,759	+		MPMX19_01840	0.72	-0.7
1,921,917	+		MPMX19_01840	0.81	-1.7
1,921,917	+		MPMX19_01840	0.81	-1.7
1,921,917	+		MPMX19_01840	0.81	+0.5
1,921,918	-		MPMX19_01840	0.81	-1.2
1,921,918	-		MPMX19_01840	0.81	-0.7
1,922,245	+				+0.7
1,922,245	+				-0.2
1,922,245	+				-0.1
1,922,245	+				+0.5
1,922,245	+				+0.0
1,922,245	+				+0.8
1,922,245	+				-0.1
1,922,245	+				-2.5
1,922,245	+				-0.2
1,922,246	-				-0.5
1,922,246	-				-2.1
1,922,246	-				+0.1
1,922,246	-				-0.5
1,922,246	-				-1.1
1,922,260	+				-0.7
1,922,260	+				-2.8
1,922,260	+				+0.0
1,922,260	+				+0.3
1,922,260	+				-0.8
1,922,260	+				+0.9
1,922,260	+				-0.2
1,922,260	+				-0.9
1,922,260	+				+0.3
1,922,260	+				+0.2
1,922,260	+				-0.7
1,922,260	+				-0.9
1,922,260	+				-0.6
1,922,260	+				-0.9
1,922,260	+				-1.0
1,922,260	+				+0.3
1,922,260	+				-0.7
1,922,260	+				+0.5
1,922,260	+				+0.1
1,922,261	-				-0.8
1,922,261	-				+1.6
1,922,261	-				-0.2
1,922,261	-				-1.4
1,922,261	-				-0.6
1,922,261	-				-0.2
1,922,261	-				-1.7
1,922,261	-				-1.2
1,922,261	-				-1.0
1,922,261	-				+1.1
1,922,261	-				+1.2
1,922,261	-				-0.8
1,922,261	-				-0.3
1,922,261	-				-0.3
1,922,261	-				-1.7
1,922,261	-				+1.4
1,922,261	-				-3.0
1,922,284	+				-0.9
1,922,284	+				+0.1
1,922,284	+				+0.2
1,922,284	+				-0.6
1,922,284	+				+0.7
1,922,284	+				+0.1
1,922,284	+				+1.2
1,922,284	+				-1.5
1,922,284	+				+0.2
1,922,284	+				-0.4
1,922,284	+				+1.1
1,922,284	+				-1.5
1,922,284	+				+0.3
1,922,284	+				-0.3
1,922,284	+				-0.9
1,922,284	+				+0.1
1,922,284	+				+0.8
1,922,285	-				-2.4
1,922,285	-				-1.2
1,922,285	-				-0.2
1,922,285	-				-0.3
1,922,285	-				-1.7
1,922,285	-				+1.1
1,922,285	-				+0.8
1,922,285	-				-2.3
1,922,285	-				-1.6
1,922,353	+				+0.1
1,922,353	+				-0.2
1,922,353	+				-1.2
1,922,353	+				-1.1
1,922,354	-				-1.6
1,922,354	-				-1.2
1,922,354	-				-0.0
1,922,472	+				+0.5
1,922,472	+				-1.5
1,922,472	+				-0.5
1,922,472	+				-0.1
1,922,472	+				+0.3
1,922,472	+				-0.2
1,922,472	+				+0.8
1,922,472	+				-0.1
1,922,472	+				+0.2
1,922,473	-				-0.0
1,922,473	-				-0.3
1,922,473	-				-1.4
1,922,473	-				-1.1
1,922,473	-				+0.7
1,922,473	-				+1.4
1,922,473	-				-0.4
1,922,473	-				+1.1
1,922,473	-				+1.5
1,922,658	+		MPMX19_01841	0.28	-0.6
1,922,658	+		MPMX19_01841	0.28	-1.4
1,922,721	+		MPMX19_01841	0.35	+0.9
1,922,722	-		MPMX19_01841	0.35	+0.2
1,922,722	-		MPMX19_01841	0.35	-1.4
1,922,722	-		MPMX19_01841	0.35	-1.0
1,922,722	-		MPMX19_01841	0.35	-1.4
1,922,722	-		MPMX19_01841	0.35	+0.5
1,922,722	-		MPMX19_01841	0.35	-0.1
1,922,994	+		MPMX19_01841	0.65	-0.3