Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01814

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,897,108	+		MPMX19_01813	0.54	-2.1
1,897,108	+		MPMX19_01813	0.54	-2.0
1,897,108	+		MPMX19_01813	0.54	-0.6
1,897,108	+		MPMX19_01813	0.54	-0.4
1,897,108	+		MPMX19_01813	0.54	-1.5
1,897,108	+		MPMX19_01813	0.54	-0.4
1,897,108	+		MPMX19_01813	0.54	-0.2
1,897,108	+		MPMX19_01813	0.54	-1.9
1,897,108	+		MPMX19_01813	0.54	-0.7
1,897,108	+		MPMX19_01813	0.54	+1.8
1,897,108	+		MPMX19_01813	0.54	-1.1
1,897,108	+		MPMX19_01813	0.54	-0.1
1,897,108	+		MPMX19_01813	0.54	-0.5
1,897,108	+		MPMX19_01813	0.54	-1.0
1,897,109	-		MPMX19_01813	0.54	-0.5
1,897,109	-		MPMX19_01813	0.54	-0.3
1,897,109	-		MPMX19_01813	0.54	-0.9
1,897,109	-		MPMX19_01813	0.54	+1.1
1,897,109	-		MPMX19_01813	0.54	-0.8
1,897,109	-		MPMX19_01813	0.54	-0.7
1,897,109	-		MPMX19_01813	0.54	-0.1
1,897,109	-		MPMX19_01813	0.54	-1.4
1,897,109	-		MPMX19_01813	0.54	-0.9
1,897,109	-		MPMX19_01813	0.54	+0.2
1,897,492	+		MPMX19_01813	0.77	-1.1
1,897,492	+		MPMX19_01813	0.77	-0.7
1,897,492	+		MPMX19_01813	0.77	-0.2
1,897,492	+		MPMX19_01813	0.77	-0.3
1,897,492	+		MPMX19_01813	0.77	-1.1
1,897,493	-		MPMX19_01813	0.77	+0.4
1,897,493	-		MPMX19_01813	0.77	+1.5
1,897,567	+		MPMX19_01813	0.81	-0.7
1,897,567	+		MPMX19_01813	0.81	+0.2
1,897,567	+		MPMX19_01813	0.81	-0.3
1,897,567	+		MPMX19_01813	0.81	-2.1
1,897,567	+		MPMX19_01813	0.81	-1.4
1,897,567	+		MPMX19_01813	0.81	-1.6
1,897,567	+		MPMX19_01813	0.81	-1.5
1,897,567	+		MPMX19_01813	0.81	+0.2
1,897,567	+		MPMX19_01813	0.81	-0.7
1,897,567	+		MPMX19_01813	0.81	-1.5
1,897,567	+		MPMX19_01813	0.81	+0.3
1,897,567	+		MPMX19_01813	0.81	-0.7
1,897,567	+		MPMX19_01813	0.81	-0.4
1,897,567	+		MPMX19_01813	0.81	-0.4
1,897,567	+		MPMX19_01813	0.81	-0.4
1,897,567	+		MPMX19_01813	0.81	-0.1
1,897,567	+		MPMX19_01813	0.81	-1.3
1,897,567	+		MPMX19_01813	0.81	-0.6
1,897,567	+		MPMX19_01813	0.81	-0.6
1,897,567	+		MPMX19_01813	0.81	+0.7
1,897,568	-		MPMX19_01813	0.81	+0.3
1,897,568	-		MPMX19_01813	0.81	+0.1
1,897,568	-		MPMX19_01813	0.81	-0.3
1,897,568	-		MPMX19_01813	0.81	-2.0
1,897,568	-		MPMX19_01813	0.81	-0.2
1,897,568	-		MPMX19_01813	0.81	+0.7
1,897,568	-		MPMX19_01813	0.81	-0.6
1,897,568	-		MPMX19_01813	0.81	-0.2
1,897,568	-		MPMX19_01813	0.81	+1.3
1,897,568	-		MPMX19_01813	0.81	-2.1
1,897,568	-		MPMX19_01813	0.81	-0.2
1,897,568	-		MPMX19_01813	0.81	-0.8
1,897,568	-		MPMX19_01813	0.81	-0.1
1,897,568	-		MPMX19_01813	0.81	-0.7
1,897,582	+		MPMX19_01813	0.82	-1.3
1,897,582	+		MPMX19_01813	0.82	-0.4
1,897,582	+		MPMX19_01813	0.82	-0.8
1,897,582	+		MPMX19_01813	0.82	+0.5
1,897,582	+		MPMX19_01813	0.82	-1.9
1,897,583	-		MPMX19_01813	0.82	-2.8
1,897,583	-		MPMX19_01813	0.82	-0.2
1,897,583	-		MPMX19_01813	0.82	-0.9
1,897,584	+		MPMX19_01813	0.82	-1.5
1,897,584	+		MPMX19_01813	0.82	-0.8
1,897,584	+		MPMX19_01813	0.82	-1.3
1,897,584	+		MPMX19_01813	0.82	+0.3
1,897,584	+		MPMX19_01813	0.82	-1.0
1,897,585	-		MPMX19_01813	0.82	-0.6
1,897,585	-		MPMX19_01813	0.82	-0.5
1,897,585	-		MPMX19_01813	0.82	+0.6
1,897,585	-		MPMX19_01813	0.82	+0.1
1,897,585	-		MPMX19_01813	0.82	-0.9
1,897,585	-		MPMX19_01813	0.82	+0.4
1,897,831	+				+1.1
1,897,831	+				+0.3
1,897,831	+				-1.3
1,897,832	-				-1.1
1,897,832	-				+0.8
1,897,941	+				-1.3
1,898,299	+				-0.3
1,898,299	+				-0.3
1,898,337	+				-0.3
1,898,337	+				-0.4
1,898,337	+				-2.2
1,898,960	+		MPMX19_01815	0.38	-0.0
1,898,960	+		MPMX19_01815	0.38	-0.2
1,898,960	+		MPMX19_01815	0.38	+0.1
1,898,961	-		MPMX19_01815	0.38	+0.1
1,898,961	-		MPMX19_01815	0.38	-1.1
1,898,961	-		MPMX19_01815	0.38	+0.1
1,899,143	+		MPMX19_01815	0.52	+2.1
1,899,143	+		MPMX19_01815	0.52	-1.5
1,899,143	+		MPMX19_01815	0.52	-0.7
1,899,143	+		MPMX19_01815	0.52	-0.5
1,899,144	-		MPMX19_01815	0.52	+1.7