Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01782

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,869,165	-		MPMX19_01781	0.32	-0.8
1,869,165	-		MPMX19_01781	0.32	-0.8
1,869,165	-		MPMX19_01781	0.32	-1.0
1,869,212	+		MPMX19_01781	0.38	+2.5
1,869,212	+		MPMX19_01781	0.38	+2.1
1,869,212	+		MPMX19_01781	0.38	+0.5
1,869,212	+		MPMX19_01781	0.38	-2.5
1,869,212	+		MPMX19_01781	0.38	-0.2
1,869,212	+		MPMX19_01781	0.38	-0.9
1,869,212	+		MPMX19_01781	0.38	-2.4
1,869,213	-		MPMX19_01781	0.38	-0.9
1,869,213	-		MPMX19_01781	0.38	-1.1
1,869,213	-		MPMX19_01781	0.38	+1.7
1,869,213	-		MPMX19_01781	0.38	-1.2
1,869,213	-		MPMX19_01781	0.38	-0.2
1,869,213	-		MPMX19_01781	0.38	-0.7
1,869,213	-		MPMX19_01781	0.38	-0.6
1,869,242	+		MPMX19_01781	0.42	-0.7
1,869,242	+		MPMX19_01781	0.42	-0.0
1,869,242	+		MPMX19_01781	0.42	-1.4
1,869,243	-		MPMX19_01781	0.42	-0.7
1,869,243	-		MPMX19_01781	0.42	-0.2
1,869,290	+		MPMX19_01781	0.48	-0.2
1,869,290	+		MPMX19_01781	0.48	-0.1
1,869,290	+		MPMX19_01781	0.48	-0.6
1,869,291	-		MPMX19_01781	0.48	-0.7
1,869,291	-		MPMX19_01781	0.48	-2.4
1,869,291	-		MPMX19_01781	0.48	+0.1
1,869,291	-		MPMX19_01781	0.48	-2.3
1,869,291	-		MPMX19_01781	0.48	+1.1
1,869,291	-		MPMX19_01781	0.48	-0.6
1,869,291	-		MPMX19_01781	0.48	+1.1
1,869,560	+		MPMX19_01781	0.83	-0.2
1,869,560	+		MPMX19_01781	0.83	-0.9
1,869,560	+		MPMX19_01781	0.83	-2.2
1,869,560	+		MPMX19_01781	0.83	-1.1
1,869,560	+		MPMX19_01781	0.83	-1.9
1,869,560	+		MPMX19_01781	0.83	-0.3
1,869,560	+		MPMX19_01781	0.83	-0.7
1,869,560	+		MPMX19_01781	0.83	-1.6
1,869,561	-		MPMX19_01781	0.83	+0.5
1,869,561	-		MPMX19_01781	0.83	-0.5
1,869,561	-		MPMX19_01781	0.83	-1.1
1,869,561	-		MPMX19_01781	0.83	-0.6
1,869,561	-		MPMX19_01781	0.83	+0.1
1,869,561	-		MPMX19_01781	0.83	+0.1
1,869,561	-		MPMX19_01781	0.83	-0.5
1,869,561	-		MPMX19_01781	0.83	-0.8
1,869,561	-		MPMX19_01781	0.83	-0.9
1,869,561	-		MPMX19_01781	0.83	-0.2
1,869,561	-		MPMX19_01781	0.83	+0.3
1,869,561	-		MPMX19_01781	0.83	-0.6
1,869,795	+				+0.9
1,869,887	-				-1.1
1,869,887	-				-2.1
1,869,986	-				-0.6
1,869,986	-				+0.9
1,870,114	+		MPMX19_01782	0.21	-1.9
1,870,114	+		MPMX19_01782	0.21	-0.7
1,870,114	+		MPMX19_01782	0.21	-0.7
1,870,114	+		MPMX19_01782	0.21	-1.0
1,870,114	+		MPMX19_01782	0.21	-1.3
1,870,114	+		MPMX19_01782	0.21	-0.7
1,870,114	+		MPMX19_01782	0.21	-0.4
1,870,114	+		MPMX19_01782	0.21	+0.4
1,870,114	+		MPMX19_01782	0.21	-0.6
1,870,114	+		MPMX19_01782	0.21	+0.3
1,870,114	+		MPMX19_01782	0.21	-1.6
1,870,114	+		MPMX19_01782	0.21	-1.0
1,870,114	+		MPMX19_01782	0.21	-0.5
1,870,114	+		MPMX19_01782	0.21	+0.5
1,870,114	+		MPMX19_01782	0.21	-1.2
1,870,114	+		MPMX19_01782	0.21	-1.3
1,870,114	+		MPMX19_01782	0.21	-1.1
1,870,114	+		MPMX19_01782	0.21	+0.3
1,870,114	+		MPMX19_01782	0.21	-0.4
1,870,115	-		MPMX19_01782	0.22	-0.4
1,870,115	-		MPMX19_01782	0.22	-0.4
1,870,115	-		MPMX19_01782	0.22	-0.6
1,870,115	-		MPMX19_01782	0.22	-0.0
1,870,115	-		MPMX19_01782	0.22	-2.3
1,870,115	-		MPMX19_01782	0.22	-1.4
1,870,115	-		MPMX19_01782	0.22	-0.7
1,870,115	-		MPMX19_01782	0.22	+0.9
1,870,115	-		MPMX19_01782	0.22	+0.3
1,870,115	-		MPMX19_01782	0.22	-1.1
1,870,115	-		MPMX19_01782	0.22	-2.8
1,870,115	-		MPMX19_01782	0.22	-0.4
1,870,115	-		MPMX19_01782	0.22	-1.7
1,870,115	-		MPMX19_01782	0.22	-1.9
1,870,115	-		MPMX19_01782	0.22	+0.3
1,870,115	-		MPMX19_01782	0.22	-0.8
1,870,115	-		MPMX19_01782	0.22	+0.3
1,870,138	+		MPMX19_01782	0.27	-1.9
1,870,139	-		MPMX19_01782	0.27	+0.5
1,870,139	-		MPMX19_01782	0.27	-1.8
1,870,139	-		MPMX19_01782	0.27	-0.2
1,870,228	+		MPMX19_01782	0.47	-0.6
1,870,229	-		MPMX19_01782	0.47	+0.3
1,870,229	-		MPMX19_01782	0.47	-2.2
1,870,355	+		MPMX19_01782	0.75	+0.5
1,870,355	+		MPMX19_01782	0.75	-2.1
1,870,375	+		MPMX19_01782	0.79	-1.5
1,870,375	+		MPMX19_01782	0.79	+0.7
1,870,375	+		MPMX19_01782	0.79	-1.4
1,870,375	+		MPMX19_01782	0.79	-1.1
1,870,375	+		MPMX19_01782	0.79	-0.1
1,870,375	+		MPMX19_01782	0.79	-0.4
1,870,375	+		MPMX19_01782	0.79	-0.7
1,870,375	+		MPMX19_01782	0.79	-2.2
1,870,375	+		MPMX19_01782	0.79	+1.3
1,870,375	+		MPMX19_01782	0.79	-1.0
1,870,375	+		MPMX19_01782	0.79	-0.4
1,870,375	+		MPMX19_01782	0.79	+0.5
1,870,375	+		MPMX19_01782	0.79	+0.3
1,870,375	+		MPMX19_01782	0.79	-1.1
1,870,376	-		MPMX19_01782	0.79	+0.9
1,870,376	-		MPMX19_01782	0.79	-0.7
1,870,376	-		MPMX19_01782	0.79	-0.5
1,870,376	-		MPMX19_01782	0.79	-0.6
1,870,376	-		MPMX19_01782	0.79	+0.3
1,870,376	-		MPMX19_01782	0.79	+0.7
1,870,376	-		MPMX19_01782	0.79	+0.5
1,870,376	-		MPMX19_01782	0.79	-0.0
1,870,376	-		MPMX19_01782	0.79	-0.7
1,870,376	-		MPMX19_01782	0.79	-0.9
1,870,376	-		MPMX19_01782	0.79	+1.1
1,870,376	-		MPMX19_01782	0.79	-1.4
1,870,419	+		MPMX19_01782	0.89	+1.6
1,870,419	+		MPMX19_01782	0.89	-0.1
1,870,419	+		MPMX19_01782	0.89	-0.1
1,870,419	+		MPMX19_01782	0.89	-1.9
1,870,420	-		MPMX19_01782	0.89	-1.3
1,870,420	-		MPMX19_01782	0.89	-0.2
1,870,546	+				+0.2
1,870,546	+				+0.6
1,870,546	+				+1.4
1,870,546	+				-0.2
1,870,546	+				-0.7
1,870,546	+				-0.5
1,870,546	+				-0.1
1,870,547	-				-1.4
1,870,547	-				-0.5
1,870,825	+		MPMX19_01783	0.31	-0.9
1,870,826	-		MPMX19_01783	0.31	-0.1
1,870,840	+		MPMX19_01783	0.33	+0.3
1,870,840	+		MPMX19_01783	0.33	+0.3
1,870,840	+		MPMX19_01783	0.33	+1.4
1,870,840	+		MPMX19_01783	0.33	-2.9
1,870,840	+		MPMX19_01783	0.33	+0.6
1,870,840	+		MPMX19_01783	0.33	+0.3
1,870,841	-		MPMX19_01783	0.33	-0.1
1,870,841	-		MPMX19_01783	0.33	-0.7
1,870,841	-		MPMX19_01783	0.33	-1.4
1,870,841	-		MPMX19_01783	0.33	-0.0
1,870,841	-		MPMX19_01783	0.33	-0.8
1,870,841	-		MPMX19_01783	0.33	+0.2
1,870,841	-		MPMX19_01783	0.33	-0.8
1,870,843	+		MPMX19_01783	0.33	+0.2
1,870,843	+		MPMX19_01783	0.33	-1.5
1,870,843	+		MPMX19_01783	0.33	-0.3
1,870,843	+		MPMX19_01783	0.33	-1.5
1,870,843	+		MPMX19_01783	0.33	-0.1
1,870,843	+		MPMX19_01783	0.33	-0.3
1,870,843	+		MPMX19_01783	0.33	-0.8
1,870,843	+		MPMX19_01783	0.33	+0.1
1,870,843	+		MPMX19_01783	0.33	-1.0
1,870,843	+		MPMX19_01783	0.33	-0.8
1,870,843	+		MPMX19_01783	0.33	+0.3
1,870,843	+		MPMX19_01783	0.33	-1.6
1,870,843	+		MPMX19_01783	0.33	-0.4
1,870,843	+		MPMX19_01783	0.33	-1.3
1,870,843	+		MPMX19_01783	0.33	-0.3
1,870,843	+		MPMX19_01783	0.33	-0.4
1,870,843	+		MPMX19_01783	0.33	-1.6
1,870,843	+		MPMX19_01783	0.33	+0.9
1,870,843	+		MPMX19_01783	0.33	+0.1
1,870,843	+		MPMX19_01783	0.33	-0.5
1,870,843	+		MPMX19_01783	0.33	+1.1
1,870,843	+		MPMX19_01783	0.33	+0.5
1,870,843	+		MPMX19_01783	0.33	-1.1
1,870,843	+		MPMX19_01783	0.33	-0.1
1,870,843	+		MPMX19_01783	0.33	-1.4
1,870,843	+		MPMX19_01783	0.33	+0.2
1,870,843	+		MPMX19_01783	0.33	-1.2
1,870,843	+		MPMX19_01783	0.33	-1.2
1,870,843	+		MPMX19_01783	0.33	-1.3
1,870,843	+		MPMX19_01783	0.33	-0.7
1,870,843	+		MPMX19_01783	0.33	+0.1
1,870,843	+		MPMX19_01783	0.33	+0.0
1,870,843	+		MPMX19_01783	0.33	-0.6
1,870,843	+		MPMX19_01783	0.33	-1.2
1,870,843	+		MPMX19_01783	0.33	+0.5
1,870,843	+		MPMX19_01783	0.33	+2.1
1,870,843	+		MPMX19_01783	0.33	+0.3
1,870,843	+		MPMX19_01783	0.33	+0.4
1,870,843	+		MPMX19_01783	0.33	+1.5
1,870,843	+		MPMX19_01783	0.33	-0.8
1,870,843	+		MPMX19_01783	0.33	-1.0
1,870,843	+		MPMX19_01783	0.33	-1.4
1,870,843	+		MPMX19_01783	0.33	-0.2
1,870,843	+		MPMX19_01783	0.33	-0.4
1,870,843	+		MPMX19_01783	0.33	-0.1
1,870,843	+		MPMX19_01783	0.33	-2.7
1,870,843	+		MPMX19_01783	0.33	-2.2
1,870,843	+		MPMX19_01783	0.33	-0.9
1,870,843	+		MPMX19_01783	0.33	-0.8
1,870,843	+		MPMX19_01783	0.33	-0.9
1,870,843	+		MPMX19_01783	0.33	-1.2
1,870,843	+		MPMX19_01783	0.33	-0.1
1,870,843	+		MPMX19_01783	0.33	+1.2
1,870,843	+		MPMX19_01783	0.33	-0.7
1,870,843	+		MPMX19_01783	0.33	-0.2
1,870,843	+		MPMX19_01783	0.33	+0.2
1,870,843	+		MPMX19_01783	0.33	-1.4
1,870,843	+		MPMX19_01783	0.33	-0.0
1,870,843	+		MPMX19_01783	0.33	-0.7
1,870,843	+		MPMX19_01783	0.33	-2.2
1,870,843	+		MPMX19_01783	0.33	-1.2
1,870,843	+		MPMX19_01783	0.33	+1.1
1,870,843	+		MPMX19_01783	0.33	-1.4
1,870,843	+		MPMX19_01783	0.33	+0.5
1,870,843	+		MPMX19_01783	0.33	+0.2
1,870,843	+		MPMX19_01783	0.33	-0.1
1,870,843	+		MPMX19_01783	0.33	-0.7
1,870,844	-		MPMX19_01783	0.33	+0.8
1,870,844	-		MPMX19_01783	0.33	-0.4
1,870,844	-		MPMX19_01783	0.33	-0.7
1,870,844	-		MPMX19_01783	0.33	+0.0
1,870,844	-		MPMX19_01783	0.33	-0.6
1,870,844	-		MPMX19_01783	0.33	-0.9
1,870,844	-		MPMX19_01783	0.33	-0.9
1,870,844	-		MPMX19_01783	0.33	-0.7
1,870,844	-		MPMX19_01783	0.33	-0.8
1,870,844	-		MPMX19_01783	0.33	+0.5
1,870,844	-		MPMX19_01783	0.33	+0.1
1,870,844	-		MPMX19_01783	0.33	-0.2
1,870,844	-		MPMX19_01783	0.33	-0.2
1,870,844	-		MPMX19_01783	0.33	-0.1
1,870,844	-		MPMX19_01783	0.33	-0.4
1,870,844	-		MPMX19_01783	0.33	-0.1
1,870,844	-		MPMX19_01783	0.33	-0.5
1,870,844	-		MPMX19_01783	0.33	+0.3
1,870,844	-		MPMX19_01783	0.33	-0.7
1,870,844	-		MPMX19_01783	0.33	+2.1
1,870,844	-		MPMX19_01783	0.33	-0.7
1,870,844	-		MPMX19_01783	0.33	-0.6
1,870,844	-		MPMX19_01783	0.33	-0.2
1,870,844	-		MPMX19_01783	0.33	-0.6
1,870,844	-		MPMX19_01783	0.33	-0.4
1,870,844	-		MPMX19_01783	0.33	-0.5
1,870,844	-		MPMX19_01783	0.33	-1.1
1,870,844	-		MPMX19_01783	0.33	-1.4
1,870,844	-		MPMX19_01783	0.33	+0.5
1,870,844	-		MPMX19_01783	0.33	+0.1
1,870,844	-		MPMX19_01783	0.33	-0.5
1,870,844	-		MPMX19_01783	0.33	-1.3
1,870,844	-		MPMX19_01783	0.33	+0.6
1,870,844	-		MPMX19_01783	0.33	+0.3
1,870,844	-		MPMX19_01783	0.33	-0.9
1,870,948	+		MPMX19_01783	0.45	-0.6
1,870,948	+		MPMX19_01783	0.45	-0.2
1,870,948	+		MPMX19_01783	0.45	+0.9
1,870,948	+		MPMX19_01783	0.45	+0.5
1,870,948	+		MPMX19_01783	0.45	-0.1
1,870,948	+		MPMX19_01783	0.45	+0.5
1,870,948	+		MPMX19_01783	0.45	-1.6
1,870,948	+		MPMX19_01783	0.45	-0.4
1,870,948	+		MPMX19_01783	0.45	+0.4
1,870,948	+		MPMX19_01783	0.45	-1.1
1,870,948	+		MPMX19_01783	0.45	-0.4
1,870,948	+		MPMX19_01783	0.45	-0.5
1,870,948	+		MPMX19_01783	0.45	+1.1
1,870,948	+		MPMX19_01783	0.45	-0.4
1,870,948	+		MPMX19_01783	0.45	-1.1
1,870,948	+		MPMX19_01783	0.45	-2.1
1,870,948	+		MPMX19_01783	0.45	+1.2
1,870,948	+		MPMX19_01783	0.45	-1.2
1,870,948	+		MPMX19_01783	0.45	-0.9
1,870,948	+		MPMX19_01783	0.45	-0.4
1,870,948	+		MPMX19_01783	0.45	-1.4
1,870,948	+		MPMX19_01783	0.45	-0.9
1,870,948	+		MPMX19_01783	0.45	+0.5
1,870,948	+		MPMX19_01783	0.45	-0.6
1,870,948	+		MPMX19_01783	0.45	-1.2
1,870,948	+		MPMX19_01783	0.45	+0.7
1,870,948	+		MPMX19_01783	0.45	+1.3
1,870,949	-		MPMX19_01783	0.45	-0.1
1,870,949	-		MPMX19_01783	0.45	-1.1
1,870,949	-		MPMX19_01783	0.45	-2.6
1,870,949	-		MPMX19_01783	0.45	-0.2
1,870,949	-		MPMX19_01783	0.45	-1.1
1,870,949	-		MPMX19_01783	0.45	-0.9
1,870,949	-		MPMX19_01783	0.45	+0.1
1,870,949	-		MPMX19_01783	0.45	-1.7
1,870,949	-		MPMX19_01783	0.45	+0.3
1,870,949	-		MPMX19_01783	0.45	-0.4
1,870,949	-		MPMX19_01783	0.45	-0.7
1,870,949	-		MPMX19_01783	0.45	-1.9
1,870,949	-		MPMX19_01783	0.45	+0.4
1,870,949	-		MPMX19_01783	0.45	-1.2
1,870,949	-		MPMX19_01783	0.45	-2.6
1,870,949	-		MPMX19_01783	0.45	-1.4
1,870,949	-		MPMX19_01783	0.45	-0.4
1,870,949	-		MPMX19_01783	0.45	-0.4
1,870,949	-		MPMX19_01783	0.45	-0.7
1,870,949	-		MPMX19_01783	0.45	+0.1
1,870,949	-		MPMX19_01783	0.45	-1.1
1,870,949	-		MPMX19_01783	0.45	-2.2
1,870,949	-		MPMX19_01783	0.45	-1.1
1,871,038	+		MPMX19_01783	0.55	+1.2
1,871,038	+		MPMX19_01783	0.55	+0.5
1,871,038	+		MPMX19_01783	0.55	+1.0
1,871,038	+		MPMX19_01783	0.55	+0.6
1,871,038	+		MPMX19_01783	0.55	-2.1
1,871,039	-		MPMX19_01783	0.55	-2.8
1,871,039	-		MPMX19_01783	0.55	-0.7
1,871,039	-		MPMX19_01783	0.55	+0.1
1,871,039	-		MPMX19_01783	0.55	+0.1