Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01665

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,749,441	+				-1.0
1,749,442	-				-0.5
1,749,442	-				-0.7
1,749,442	-				-0.7
1,749,442	-				-0.3
1,749,723	+		MPMX19_01664	0.30	-0.1
1,749,723	+		MPMX19_01664	0.30	-0.7
1,749,723	+		MPMX19_01664	0.30	-0.7
1,749,723	+		MPMX19_01664	0.30	-0.0
1,749,723	+		MPMX19_01664	0.30	-1.2
1,749,723	+		MPMX19_01664	0.30	-0.5
1,749,723	+		MPMX19_01664	0.30	-0.3
1,749,723	+		MPMX19_01664	0.30	-0.0
1,749,723	+		MPMX19_01664	0.30	-0.5
1,749,723	+		MPMX19_01664	0.30	+0.2
1,749,723	+		MPMX19_01664	0.30	-1.3
1,749,723	+		MPMX19_01664	0.30	-0.4
1,749,723	+		MPMX19_01664	0.30	-0.9
1,749,723	+		MPMX19_01664	0.30	-1.0
1,749,723	+		MPMX19_01664	0.30	-1.3
1,749,723	+		MPMX19_01664	0.30	-0.5
1,749,724	-		MPMX19_01664	0.30	+1.1
1,749,724	-		MPMX19_01664	0.30	+1.8
1,749,724	-		MPMX19_01664	0.30	-0.5
1,749,724	-		MPMX19_01664	0.30	-1.4
1,749,724	-		MPMX19_01664	0.30	-0.3
1,749,724	-		MPMX19_01664	0.30	+1.3
1,749,724	-		MPMX19_01664	0.30	-0.4
1,749,724	-		MPMX19_01664	0.30	+0.5
1,749,724	-		MPMX19_01664	0.30	-1.6
1,749,842	+		MPMX19_01664	0.45	-0.3
1,749,842	+		MPMX19_01664	0.45	-0.5
1,749,842	+		MPMX19_01664	0.45	-0.0
1,749,842	+		MPMX19_01664	0.45	-0.9
1,749,842	+		MPMX19_01664	0.45	+0.5
1,749,843	-		MPMX19_01664	0.45	-0.0
1,749,843	-		MPMX19_01664	0.45	-1.0
1,749,843	-		MPMX19_01664	0.45	-0.2
1,749,843	-		MPMX19_01664	0.45	-0.3
1,749,959	+		MPMX19_01664	0.60	-1.2
1,749,959	+		MPMX19_01664	0.60	-0.7
1,749,959	+		MPMX19_01664	0.60	-1.6
1,749,959	+		MPMX19_01664	0.60	-0.1
1,749,960	-		MPMX19_01664	0.60	-0.1
1,749,960	-		MPMX19_01664	0.60	-1.3
1,749,960	-		MPMX19_01664	0.60	+0.8
1,749,960	-		MPMX19_01664	0.60	-1.3
1,749,960	-		MPMX19_01664	0.60	-2.0
1,749,960	-		MPMX19_01664	0.60	+0.3
1,749,960	-		MPMX19_01664	0.60	+0.1
1,749,960	-		MPMX19_01664	0.60	+1.1
1,750,061	+		MPMX19_01664	0.73	-0.6
1,750,061	+		MPMX19_01664	0.73	-0.6
1,750,061	+		MPMX19_01664	0.73	-0.9
1,750,061	+		MPMX19_01664	0.73	-1.5
1,750,061	+		MPMX19_01664	0.73	+0.7
1,750,061	+		MPMX19_01664	0.73	-1.0
1,750,062	-		MPMX19_01664	0.73	-1.7
1,750,062	-		MPMX19_01664	0.73	-1.1
1,750,062	-		MPMX19_01664	0.73	-0.9
1,750,062	-		MPMX19_01664	0.73	-0.1
1,750,223	+				+0.0
1,750,223	+				+0.5
1,750,224	-				-1.9
1,750,268	+				+0.6
1,750,268	+				-0.1
1,750,268	+				-0.3
1,750,269	-				-2.0
1,750,269	-				-1.4
1,750,344	-				-1.8
1,750,438	+				+0.1
1,750,438	+				+0.3
1,750,438	+				+0.1
1,750,438	+				-1.9
1,750,438	+				-1.5
1,750,438	+				-1.5
1,750,438	+				-1.7
1,750,439	-				-0.2
1,750,439	-				-0.0
1,750,439	-				-0.6
1,750,439	-				+0.2
1,750,439	-				-0.3
1,750,439	-				-0.1
1,750,439	-				-1.6
1,751,010	+		MPMX19_01665	0.53	-0.6
1,751,010	+		MPMX19_01665	0.53	-1.0
1,751,010	+		MPMX19_01665	0.53	+0.7
1,751,010	+		MPMX19_01665	0.53	+0.6
1,751,010	+		MPMX19_01665	0.53	+0.4
1,751,010	+		MPMX19_01665	0.53	+1.1
1,751,010	+		MPMX19_01665	0.53	-1.1
1,751,010	+		MPMX19_01665	0.53	+2.1
1,751,010	+		MPMX19_01665	0.53	-0.4
1,751,010	+		MPMX19_01665	0.53	-0.9
1,751,011	-		MPMX19_01665	0.53	-1.1
1,751,011	-		MPMX19_01665	0.53	-0.7
1,751,011	-		MPMX19_01665	0.53	-0.3
1,751,011	-		MPMX19_01665	0.53	-1.6
1,751,011	-		MPMX19_01665	0.53	+0.1
1,751,011	-		MPMX19_01665	0.53	-1.2
1,751,022	+		MPMX19_01665	0.54	+1.1
1,751,022	+		MPMX19_01665	0.54	-0.3
1,751,022	+		MPMX19_01665	0.54	-2.4
1,751,022	+		MPMX19_01665	0.54	+0.5
1,751,022	+		MPMX19_01665	0.54	-0.3
1,751,022	+		MPMX19_01665	0.54	-1.3
1,751,022	+		MPMX19_01665	0.54	-1.1
1,751,022	+		MPMX19_01665	0.54	-0.5
1,751,022	+		MPMX19_01665	0.54	-0.9
1,751,022	+		MPMX19_01665	0.54	+0.5
1,751,022	+		MPMX19_01665	0.54	+1.4
1,751,022	+		MPMX19_01665	0.54	+0.6
1,751,023	-		MPMX19_01665	0.54	-1.5
1,751,023	-		MPMX19_01665	0.54	-1.3
1,751,023	-		MPMX19_01665	0.54	-0.1
1,751,023	-		MPMX19_01665	0.54	+0.1
1,751,023	-		MPMX19_01665	0.54	+0.7
1,751,023	-		MPMX19_01665	0.54	+0.6
1,751,023	-		MPMX19_01665	0.54	-1.6
1,751,023	-		MPMX19_01665	0.54	-1.1
1,751,023	-		MPMX19_01665	0.54	-0.8
1,751,023	-		MPMX19_01665	0.54	-1.2
1,751,076	+		MPMX19_01665	0.58	+0.1
1,751,076	+		MPMX19_01665	0.58	-0.2
1,751,076	+		MPMX19_01665	0.58	-0.5
1,751,076	+		MPMX19_01665	0.58	-1.1
1,751,077	-		MPMX19_01665	0.59	-0.3
1,751,077	-		MPMX19_01665	0.59	-0.8
1,751,077	-		MPMX19_01665	0.59	-0.7
1,751,077	-		MPMX19_01665	0.59	+0.2
1,751,077	-		MPMX19_01665	0.59	-1.6
1,751,077	-		MPMX19_01665	0.59	-0.8
1,751,077	-		MPMX19_01665	0.59	-0.4
1,751,077	-		MPMX19_01665	0.59	+0.4
1,751,077	-		MPMX19_01665	0.59	-0.3
1,751,232	+		MPMX19_01665	0.72	+0.3
1,751,232	+		MPMX19_01665	0.72	+1.1
1,751,232	+		MPMX19_01665	0.72	-1.3
1,751,232	+		MPMX19_01665	0.72	+0.5
1,751,232	+		MPMX19_01665	0.72	+0.7
1,751,232	+		MPMX19_01665	0.72	-1.7
1,751,232	+		MPMX19_01665	0.72	-0.7
1,751,232	+		MPMX19_01665	0.72	+1.4
1,751,232	+		MPMX19_01665	0.72	+0.1
1,751,232	+		MPMX19_01665	0.72	+0.5
1,751,233	-		MPMX19_01665	0.72	+0.6
1,751,233	-		MPMX19_01665	0.72	-0.2
1,751,233	-		MPMX19_01665	0.72	-0.3
1,751,233	-		MPMX19_01665	0.72	-0.7
1,751,233	-		MPMX19_01665	0.72	+0.6
1,751,233	-		MPMX19_01665	0.72	-1.3
1,751,233	-		MPMX19_01665	0.72	-0.3
1,751,233	-		MPMX19_01665	0.72	-0.8
1,751,233	-		MPMX19_01665	0.72	+0.7
1,751,233	-		MPMX19_01665	0.72	+1.1
1,751,298	+		MPMX19_01665	0.78	+0.7
1,751,298	+		MPMX19_01665	0.78	-1.1
1,751,298	+		MPMX19_01665	0.78	-0.1
1,751,298	+		MPMX19_01665	0.78	-0.0
1,751,298	+		MPMX19_01665	0.78	-0.3
1,751,298	+		MPMX19_01665	0.78	+0.8
1,751,298	+		MPMX19_01665	0.78	+0.6
1,751,298	+		MPMX19_01665	0.78	-0.1
1,751,298	+		MPMX19_01665	0.78	-0.9
1,751,298	+		MPMX19_01665	0.78	-1.0
1,751,299	-		MPMX19_01665	0.78	+0.5
1,751,299	-		MPMX19_01665	0.78	-1.7
1,751,299	-		MPMX19_01665	0.78	-1.7
1,751,299	-		MPMX19_01665	0.78	-0.5
1,751,299	-		MPMX19_01665	0.78	-0.4
1,751,299	-		MPMX19_01665	0.78	-0.4
1,751,349	+		MPMX19_01665	0.82	-0.7
1,751,349	+		MPMX19_01665	0.82	-1.4
1,751,349	+		MPMX19_01665	0.82	-1.4
1,751,349	+		MPMX19_01665	0.82	-0.3
1,751,349	+		MPMX19_01665	0.82	+1.5
1,751,350	-		MPMX19_01665	0.82	-1.0
1,751,350	-		MPMX19_01665	0.82	-1.4
1,751,350	-		MPMX19_01665	0.82	-1.1
1,751,350	-		MPMX19_01665	0.82	-1.1
1,751,350	-		MPMX19_01665	0.82	+1.2
1,751,409	+		MPMX19_01665	0.87	+0.7
1,751,409	+		MPMX19_01665	0.87	-2.2
1,751,409	+		MPMX19_01665	0.87	-0.8
1,751,409	+		MPMX19_01665	0.87	-2.3
1,751,409	+		MPMX19_01665	0.87	-1.3
1,751,409	+		MPMX19_01665	0.87	+0.0
1,751,409	+		MPMX19_01665	0.87	-0.9
1,751,410	-		MPMX19_01665	0.87	+0.1
1,751,410	-		MPMX19_01665	0.87	-0.7
1,751,410	-		MPMX19_01665	0.87	-0.5
1,751,410	-		MPMX19_01665	0.87	-1.6
1,751,410	-		MPMX19_01665	0.87	-0.8
1,751,410	-		MPMX19_01665	0.87	-0.5
1,751,410	-		MPMX19_01665	0.87	-0.5
1,751,446	-				-0.4
1,751,487	+				-0.3
1,751,487	+				-0.0
1,751,487	+				+0.0
1,751,487	+				-1.5
1,751,487	+				-1.4
1,751,487	+				-1.4
1,751,487	+				+0.1
1,751,487	+				+0.3
1,751,487	+				-0.1
1,751,487	+				-0.3
1,751,488	-				-0.7
1,751,488	-				-1.3
1,751,488	-				-0.3
1,751,488	-				-1.6
1,751,488	-				+0.5
1,751,488	-				-0.5
1,751,640	+				+0.9
1,751,640	+				-0.7
1,751,640	+				+0.8
1,751,640	+				-0.5
1,751,640	+				-0.3
1,751,640	+				-0.6
1,751,640	+				-0.3
1,751,640	+				+0.7
1,751,640	+				-1.2
1,751,640	+				-2.5
1,751,640	+				-0.4
1,751,641	-				-0.2
1,751,641	-				-0.7
1,751,641	-				+0.3
1,751,641	-				-1.9
1,751,641	-				+1.4
1,751,641	-				-1.3
1,751,641	-				-0.4
1,751,641	-				-0.7
1,751,641	-				+0.6
1,751,641	-				-0.4
1,751,641	-				+0.2
1,751,642	+				-0.6
1,751,642	+				+0.1
1,751,642	+				-1.6
1,751,642	+				+0.8
1,751,642	+				-0.9
1,751,642	+				+0.1
1,751,642	+				-0.5
1,751,642	+				-0.3
1,751,642	+				-0.7
1,751,642	+				-1.1
1,751,642	+				-0.5
1,751,643	-				-0.3
1,751,643	-				-0.6
1,751,643	-				-0.9
1,751,643	-				-0.7
1,751,643	-				-0.1
1,751,643	-				-0.4
1,751,643	-				+1.6
1,751,643	-				-0.0
1,751,904	+		MPMX19_01666	0.12	-0.3
1,751,904	+		MPMX19_01666	0.12	-1.8
1,751,904	+		MPMX19_01666	0.12	-0.9
1,751,904	+		MPMX19_01666	0.12	+0.4
1,751,905	-		MPMX19_01666	0.12	-0.3
1,751,905	-		MPMX19_01666	0.12	-0.9
1,751,905	-		MPMX19_01666	0.12	-1.6
1,751,905	-		MPMX19_01666	0.12	-0.4
1,751,905	-		MPMX19_01666	0.12	-0.1
1,751,905	-		MPMX19_01666	0.12	-0.3
1,751,905	-		MPMX19_01666	0.12	-1.4
1,751,905	-		MPMX19_01666	0.12	-0.4
1,751,952	+		MPMX19_01666	0.15	+0.0
1,751,952	+		MPMX19_01666	0.15	-1.2
1,751,952	+		MPMX19_01666	0.15	+0.8
1,751,952	+		MPMX19_01666	0.15	-0.9
1,751,952	+		MPMX19_01666	0.15	-1.8
1,751,952	+		MPMX19_01666	0.15	-0.4
1,751,952	+		MPMX19_01666	0.15	+0.4
1,751,952	+		MPMX19_01666	0.15	+0.6
1,751,952	+		MPMX19_01666	0.15	-0.2
1,751,952	+		MPMX19_01666	0.15	-1.6
1,751,952	+		MPMX19_01666	0.15	+0.1
1,751,952	+		MPMX19_01666	0.15	-0.8
1,751,952	+		MPMX19_01666	0.15	-1.7
1,751,952	+		MPMX19_01666	0.15	-1.3
1,751,952	+		MPMX19_01666	0.15	+0.1
1,751,952	+		MPMX19_01666	0.15	-1.4
1,751,952	+		MPMX19_01666	0.15	+0.1
1,751,952	+		MPMX19_01666	0.15	+0.2
1,751,952	+		MPMX19_01666	0.15	+0.3
1,751,952	+		MPMX19_01666	0.15	+1.6
1,751,952	+		MPMX19_01666	0.15	-0.7
1,751,952	+		MPMX19_01666	0.15	-0.6
1,751,952	+		MPMX19_01666	0.15	-0.5
1,751,952	+		MPMX19_01666	0.15	-0.2
1,751,952	+		MPMX19_01666	0.15	-0.6
1,751,952	+		MPMX19_01666	0.15	-0.5
1,751,952	+		MPMX19_01666	0.15	-0.3
1,751,952	+		MPMX19_01666	0.15	+0.5
1,751,952	+		MPMX19_01666	0.15	-0.7
1,751,952	+		MPMX19_01666	0.15	-1.7
1,751,952	+		MPMX19_01666	0.15	+0.6
1,751,952	+		MPMX19_01666	0.15	-1.3
1,751,952	+		MPMX19_01666	0.15	+0.3
1,751,952	+		MPMX19_01666	0.15	-1.2
1,751,952	+		MPMX19_01666	0.15	-1.1
1,751,953	-		MPMX19_01666	0.15	-1.1
1,751,953	-		MPMX19_01666	0.15	+0.1
1,751,953	-		MPMX19_01666	0.15	-0.7
1,751,953	-		MPMX19_01666	0.15	-1.7
1,751,953	-		MPMX19_01666	0.15	-0.2
1,751,953	-		MPMX19_01666	0.15	-0.3
1,751,953	-		MPMX19_01666	0.15	+0.5
1,751,953	-		MPMX19_01666	0.15	+1.3
1,751,953	-		MPMX19_01666	0.15	-0.2
1,751,953	-		MPMX19_01666	0.15	-1.3
1,751,953	-		MPMX19_01666	0.15	-0.7
1,751,953	-		MPMX19_01666	0.15	-0.3
1,751,953	-		MPMX19_01666	0.15	+0.6
1,751,953	-		MPMX19_01666	0.15	-1.4
1,751,953	-		MPMX19_01666	0.15	-0.2
1,751,953	-		MPMX19_01666	0.15	-1.1