Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01661

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,741,997	+		MPMX19_01660	0.41	-0.6
1,741,997	+		MPMX19_01660	0.41	-1.2
1,741,997	+		MPMX19_01660	0.41	-0.5
1,741,997	+		MPMX19_01660	0.41	+0.7
1,741,997	+		MPMX19_01660	0.41	-0.4
1,741,997	+		MPMX19_01660	0.41	-0.2
1,741,997	+		MPMX19_01660	0.41	-0.5
1,741,997	+		MPMX19_01660	0.41	-1.2
1,741,997	+		MPMX19_01660	0.41	-0.8
1,741,997	+		MPMX19_01660	0.41	-1.8
1,741,997	+		MPMX19_01660	0.41	+0.5
1,741,997	+		MPMX19_01660	0.41	+0.9
1,741,997	+		MPMX19_01660	0.41	-1.6
1,741,997	+		MPMX19_01660	0.41	-0.5
1,741,997	+		MPMX19_01660	0.41	-2.1
1,741,997	+		MPMX19_01660	0.41	-0.2
1,741,997	+		MPMX19_01660	0.41	+0.3
1,741,997	+		MPMX19_01660	0.41	-0.8
1,741,997	+		MPMX19_01660	0.41	-1.3
1,741,997	+		MPMX19_01660	0.41	-1.5
1,741,997	+		MPMX19_01660	0.41	+0.9
1,741,997	+		MPMX19_01660	0.41	-1.1
1,741,997	+		MPMX19_01660	0.41	-0.2
1,741,997	+		MPMX19_01660	0.41	-0.9
1,741,997	+		MPMX19_01660	0.41	+0.7
1,741,997	+		MPMX19_01660	0.41	-0.4
1,741,997	+		MPMX19_01660	0.41	-0.8
1,741,998	-		MPMX19_01660	0.41	-1.5
1,741,998	-		MPMX19_01660	0.41	-0.5
1,741,998	-		MPMX19_01660	0.41	-0.4
1,741,998	-		MPMX19_01660	0.41	+0.2
1,741,998	-		MPMX19_01660	0.41	+1.5
1,741,998	-		MPMX19_01660	0.41	-0.9
1,741,998	-		MPMX19_01660	0.41	-1.5
1,741,998	-		MPMX19_01660	0.41	-0.2
1,741,998	-		MPMX19_01660	0.41	-0.8
1,741,998	-		MPMX19_01660	0.41	-1.7
1,741,998	-		MPMX19_01660	0.41	-0.7
1,741,998	-		MPMX19_01660	0.41	-0.2
1,741,998	-		MPMX19_01660	0.41	-0.8
1,741,998	-		MPMX19_01660	0.41	+0.4
1,741,998	-		MPMX19_01660	0.41	-1.7
1,741,998	-		MPMX19_01660	0.41	+0.8
1,741,998	-		MPMX19_01660	0.41	+0.8
1,741,998	-		MPMX19_01660	0.41	+0.1
1,741,998	-		MPMX19_01660	0.41	-0.2
1,741,998	-		MPMX19_01660	0.41	+0.3
1,741,998	-		MPMX19_01660	0.41	-0.8
1,741,998	-		MPMX19_01660	0.41	-0.8
1,741,998	-		MPMX19_01660	0.41	+0.1
1,741,998	-		MPMX19_01660	0.41	+0.2
1,742,060	+		MPMX19_01660	0.48	-0.4
1,742,060	+		MPMX19_01660	0.48	-0.9
1,742,060	+		MPMX19_01660	0.48	-0.7
1,742,061	-		MPMX19_01660	0.48	-0.1
1,742,061	-		MPMX19_01660	0.48	+0.1
1,742,061	-		MPMX19_01660	0.48	-0.7
1,742,076	+		MPMX19_01660	0.50	-0.2
1,742,076	+		MPMX19_01660	0.50	-0.5
1,742,309	+		MPMX19_01660	0.75	+1.7
1,742,309	+		MPMX19_01660	0.75	-0.9
1,742,309	+		MPMX19_01660	0.75	-0.1
1,742,309	+		MPMX19_01660	0.75	+2.5
1,742,309	+		MPMX19_01660	0.75	+0.3
1,742,310	-		MPMX19_01660	0.75	-1.2
1,742,310	-		MPMX19_01660	0.75	+0.1
1,742,310	-		MPMX19_01660	0.75	-1.5
1,742,310	-		MPMX19_01660	0.75	-1.1
1,742,310	-		MPMX19_01660	0.75	-1.2
1,742,310	-		MPMX19_01660	0.75	-0.4
1,742,310	-		MPMX19_01660	0.75	-0.5
1,742,310	-		MPMX19_01660	0.75	+0.3
1,742,310	-		MPMX19_01660	0.75	-1.1
1,742,310	-		MPMX19_01660	0.75	+0.2
1,742,463	-				-0.2
1,742,483	+				-1.1
1,742,483	+				+1.3
1,742,483	+				-0.1
1,742,483	+				+0.1
1,742,483	+				-0.1
1,742,483	+				+0.7
1,742,483	+				-1.4
1,742,484	-				-0.9
1,742,484	-				+0.2
1,742,484	-				+0.9
1,742,583	+				+0.1
1,742,583	+				+1.2
1,742,583	+				-0.1
1,742,583	+				-0.5
1,742,583	+				-1.5
1,742,584	-				-0.1
1,742,584	-				+0.1
1,742,584	-				-1.4
1,742,584	-				-0.7
1,742,584	-				-0.2
1,742,584	-				-1.9
1,742,584	-				-0.8
1,742,584	-				-1.6
1,742,584	-				-0.4
1,742,584	-				-0.2
1,742,584	-				-1.2
1,742,584	-				-0.7
1,742,584	-				+0.3
1,742,642	-				-0.0
1,742,642	-				-1.1
1,742,642	-				-0.6
1,742,642	-				+1.1
1,742,642	-				+0.8
1,742,649	+				-0.7
1,742,649	+				-0.2
1,742,660	-				-0.2
1,742,713	-				+0.1
1,742,731	+				-0.7
1,742,731	+				-2.1
1,742,731	+				+0.3
1,742,731	+				+0.6
1,742,731	+				-0.2
1,742,731	+				-0.2
1,742,731	+				-0.6
1,742,732	-				+1.3
1,742,732	-				-0.8
1,742,732	-				-1.2
1,742,732	-				-1.2
1,742,732	-				-1.4
1,742,732	-				+0.1
1,742,732	-				+0.5
1,742,746	+				-0.6
1,742,746	+				-1.7
1,743,036	+		MPMX19_01661	0.13	-0.2
1,743,036	+		MPMX19_01661	0.13	+0.7
1,743,036	+		MPMX19_01661	0.13	-2.2
1,743,036	+		MPMX19_01661	0.13	-0.6
1,743,037	-		MPMX19_01661	0.13	+2.1
1,743,060	+		MPMX19_01661	0.14	-0.2
1,743,060	+		MPMX19_01661	0.14	-0.6
1,743,060	+		MPMX19_01661	0.14	-0.7
1,743,060	+		MPMX19_01661	0.14	+0.5
1,743,060	+		MPMX19_01661	0.14	-0.5
1,743,060	+		MPMX19_01661	0.14	-0.3
1,743,060	+		MPMX19_01661	0.14	-0.9
1,743,060	+		MPMX19_01661	0.14	-1.1
1,743,060	+		MPMX19_01661	0.14	-0.3
1,743,060	+		MPMX19_01661	0.14	-0.9
1,743,060	+		MPMX19_01661	0.14	+0.5
1,743,060	+		MPMX19_01661	0.14	+0.5
1,743,060	+		MPMX19_01661	0.14	-0.4
1,743,060	+		MPMX19_01661	0.14	+0.5
1,743,060	+		MPMX19_01661	0.14	-0.3
1,743,060	+		MPMX19_01661	0.14	+0.6
1,743,060	+		MPMX19_01661	0.14	-0.5
1,743,060	+		MPMX19_01661	0.14	-0.9
1,743,060	+		MPMX19_01661	0.14	+0.1
1,743,060	+		MPMX19_01661	0.14	-1.3
1,743,060	+		MPMX19_01661	0.14	-0.7
1,743,060	+		MPMX19_01661	0.14	+0.3
1,743,060	+		MPMX19_01661	0.14	+0.1
1,743,060	+		MPMX19_01661	0.14	-1.6
1,743,060	+		MPMX19_01661	0.14	-0.7
1,743,060	+		MPMX19_01661	0.14	+0.1
1,743,060	+		MPMX19_01661	0.14	-1.6
1,743,060	+		MPMX19_01661	0.14	+0.1
1,743,060	+		MPMX19_01661	0.14	-1.5
1,743,060	+		MPMX19_01661	0.14	+1.5
1,743,060	+		MPMX19_01661	0.14	-0.1
1,743,060	+		MPMX19_01661	0.14	-0.3
1,743,060	+		MPMX19_01661	0.14	+0.5
1,743,060	+		MPMX19_01661	0.14	-0.6
1,743,061	-		MPMX19_01661	0.14	-1.3
1,743,061	-		MPMX19_01661	0.14	-0.0
1,743,061	-		MPMX19_01661	0.14	-0.5
1,743,061	-		MPMX19_01661	0.14	-0.3
1,743,061	-		MPMX19_01661	0.14	-0.7
1,743,061	-		MPMX19_01661	0.14	+2.8
1,743,061	-		MPMX19_01661	0.14	-0.0
1,743,061	-		MPMX19_01661	0.14	+0.3
1,743,061	-		MPMX19_01661	0.14	-0.9
1,743,061	-		MPMX19_01661	0.14	-1.3
1,743,061	-		MPMX19_01661	0.14	+0.5
1,743,061	-		MPMX19_01661	0.14	+0.3
1,743,061	-		MPMX19_01661	0.14	-0.5
1,743,061	-		MPMX19_01661	0.14	-2.5
1,743,061	-		MPMX19_01661	0.14	-0.6
1,743,061	-		MPMX19_01661	0.14	-1.1
1,743,061	-		MPMX19_01661	0.14	+0.2
1,743,061	-		MPMX19_01661	0.14	-1.1
1,743,061	-		MPMX19_01661	0.14	+1.1
1,743,061	-		MPMX19_01661	0.14	-0.9
1,743,061	-		MPMX19_01661	0.14	-0.5
1,743,061	-		MPMX19_01661	0.14	+0.3
1,743,061	-		MPMX19_01661	0.14	-0.1
1,743,061	-		MPMX19_01661	0.14	+0.0
1,743,061	-		MPMX19_01661	0.14	+0.7
1,743,061	-		MPMX19_01661	0.14	-0.1
1,743,061	-		MPMX19_01661	0.14	+1.2
1,743,061	-		MPMX19_01661	0.14	+0.1
1,743,061	-		MPMX19_01661	0.14	-1.1
1,743,061	-		MPMX19_01661	0.14	-0.5
1,743,061	-		MPMX19_01661	0.14	-0.3
1,743,150	+		MPMX19_01661	0.18	+0.4
1,743,150	+		MPMX19_01661	0.18	+0.3
1,743,150	+		MPMX19_01661	0.18	+1.1
1,743,150	+		MPMX19_01661	0.18	+0.7
1,743,150	+		MPMX19_01661	0.18	+0.3
1,743,150	+		MPMX19_01661	0.18	+1.8
1,743,150	+		MPMX19_01661	0.18	+0.1
1,743,150	+		MPMX19_01661	0.18	+1.5
1,743,150	+		MPMX19_01661	0.18	+3.7
1,743,150	+		MPMX19_01661	0.18	-0.7
1,743,151	-		MPMX19_01661	0.19	-0.6
1,743,151	-		MPMX19_01661	0.19	+0.7
1,743,151	-		MPMX19_01661	0.19	+0.7
1,743,151	-		MPMX19_01661	0.19	+1.9
1,743,151	-		MPMX19_01661	0.19	-1.9
1,743,151	-		MPMX19_01661	0.19	+1.7
1,743,369	+		MPMX19_01661	0.30	-0.1
1,743,369	+		MPMX19_01661	0.30	+0.6
1,743,369	+		MPMX19_01661	0.30	+0.7
1,743,370	-		MPMX19_01661	0.30	-0.4
1,743,396	+		MPMX19_01661	0.31	+0.5
1,743,396	+		MPMX19_01661	0.31	+0.1
1,743,396	+		MPMX19_01661	0.31	-0.1
1,743,397	-		MPMX19_01661	0.31	-1.6
1,743,397	-		MPMX19_01661	0.31	-2.3
1,743,397	-		MPMX19_01661	0.31	+0.3
1,743,397	-		MPMX19_01661	0.31	-1.5
1,743,426	+		MPMX19_01661	0.33	+0.0
1,743,426	+		MPMX19_01661	0.33	+0.5
1,743,426	+		MPMX19_01661	0.33	-1.8
1,743,426	+		MPMX19_01661	0.33	+0.5
1,743,426	+		MPMX19_01661	0.33	-0.3
1,743,426	+		MPMX19_01661	0.33	-1.5
1,743,426	+		MPMX19_01661	0.33	-0.2
1,743,426	+		MPMX19_01661	0.33	-0.1
1,743,426	+		MPMX19_01661	0.33	-0.5
1,743,427	-		MPMX19_01661	0.33	-0.9
1,743,731	-		MPMX19_01661	0.48	+0.9
1,743,731	-		MPMX19_01661	0.48	-0.5
1,744,011	+		MPMX19_01661	0.63	-2.3
1,744,012	-		MPMX19_01661	0.63	+0.7
1,744,272	+		MPMX19_01661	0.76	-1.2
1,744,272	+		MPMX19_01661	0.76	+0.5
1,744,272	+		MPMX19_01661	0.76	+0.6
1,744,272	+		MPMX19_01661	0.76	-0.8
1,744,272	+		MPMX19_01661	0.76	-0.3
1,744,273	-		MPMX19_01661	0.76	-1.4
1,744,273	-		MPMX19_01661	0.76	+0.8
1,744,273	-		MPMX19_01661	0.76	+1.6
1,744,298	+		MPMX19_01661	0.77	-0.9
1,744,298	+		MPMX19_01661	0.77	-0.5
1,744,298	+		MPMX19_01661	0.77	-0.3
1,744,298	+		MPMX19_01661	0.77	-0.3
1,744,298	+		MPMX19_01661	0.77	+0.8
1,744,299	-		MPMX19_01661	0.78	-0.9
1,744,299	-		MPMX19_01661	0.78	-0.4
1,744,470	+		MPMX19_01661	0.86	-0.8
1,744,470	+		MPMX19_01661	0.86	-2.2
1,744,470	+		MPMX19_01661	0.86	-1.3
1,744,470	+		MPMX19_01661	0.86	-0.7
1,744,470	+		MPMX19_01661	0.86	-2.3
1,744,470	+		MPMX19_01661	0.86	+0.5
1,744,470	+		MPMX19_01661	0.86	-1.1
1,744,470	+		MPMX19_01661	0.86	-0.3
1,744,470	+		MPMX19_01661	0.86	-0.9
1,744,470	+		MPMX19_01661	0.86	-2.2
1,744,470	+		MPMX19_01661	0.86	-0.9
1,744,470	+		MPMX19_01661	0.86	+0.5
1,744,470	+		MPMX19_01661	0.86	-0.3
1,744,470	+		MPMX19_01661	0.86	-1.3
1,744,471	-		MPMX19_01661	0.86	+0.1
1,744,471	-		MPMX19_01661	0.86	-2.8
1,744,471	-		MPMX19_01661	0.86	+0.5
1,744,471	-		MPMX19_01661	0.86	-1.0
1,744,471	-		MPMX19_01661	0.86	+0.4
1,744,471	-		MPMX19_01661	0.86	+1.7
1,744,471	-		MPMX19_01661	0.86	-0.7
1,744,471	-		MPMX19_01661	0.86	-1.2
1,744,471	-		MPMX19_01661	0.86	-0.3
1,744,471	-		MPMX19_01661	0.86	-0.4
1,744,499	-		MPMX19_01661	0.88	+1.0
1,744,629	+				-1.0
1,744,629	+				-1.8
1,744,642	+				+1.5
1,744,642	+				+0.2
1,744,642	+				+1.5
1,744,642	+				-1.6
1,744,643	-				-0.4
1,744,643	-				-0.7
1,744,785	+				-1.3
1,744,785	+				-0.2
1,745,208	+		MPMX19_01662	0.12	-0.2
1,745,208	+		MPMX19_01662	0.12	-1.1
1,745,208	+		MPMX19_01662	0.12	-0.6
1,745,208	+		MPMX19_01662	0.12	-1.1
1,745,208	+		MPMX19_01662	0.12	-1.4
1,745,208	+		MPMX19_01662	0.12	+0.2
1,745,208	+		MPMX19_01662	0.12	-1.1
1,745,208	+		MPMX19_01662	0.12	+0.1
1,745,208	+		MPMX19_01662	0.12	-0.0
1,745,209	-		MPMX19_01662	0.12	-1.5
1,745,209	-		MPMX19_01662	0.12	-0.8
1,745,209	-		MPMX19_01662	0.12	-1.7
1,745,209	-		MPMX19_01662	0.12	-0.6
1,745,209	-		MPMX19_01662	0.12	-1.5
1,745,209	-		MPMX19_01662	0.12	-0.6
1,745,209	-		MPMX19_01662	0.12	+0.3
1,745,209	-		MPMX19_01662	0.12	+0.1
1,745,209	-		MPMX19_01662	0.12	-1.4
1,745,211	+		MPMX19_01662	0.12	-1.9
1,745,211	+		MPMX19_01662	0.12	+0.5
1,745,211	+		MPMX19_01662	0.12	-0.9
1,745,211	+		MPMX19_01662	0.12	-1.6
1,745,211	+		MPMX19_01662	0.12	-1.3
1,745,211	+		MPMX19_01662	0.12	-0.7
1,745,211	+		MPMX19_01662	0.12	-0.9
1,745,211	+		MPMX19_01662	0.12	+0.7
1,745,212	-		MPMX19_01662	0.12	-1.4
1,745,212	-		MPMX19_01662	0.12	-2.0
1,745,212	-		MPMX19_01662	0.12	-0.7
1,745,212	-		MPMX19_01662	0.12	-0.3
1,745,448	+		MPMX19_01662	0.18	-1.2
1,745,448	+		MPMX19_01662	0.18	+0.7
1,745,448	+		MPMX19_01662	0.18	-0.0
1,745,448	+		MPMX19_01662	0.18	-0.9
1,745,448	+		MPMX19_01662	0.18	-0.2
1,745,448	+		MPMX19_01662	0.18	-0.1
1,745,448	+		MPMX19_01662	0.18	-0.7
1,745,448	+		MPMX19_01662	0.18	+0.4
1,745,448	+		MPMX19_01662	0.18	-0.5
1,745,448	+		MPMX19_01662	0.18	-1.1
1,745,448	+		MPMX19_01662	0.18	-0.2
1,745,448	+		MPMX19_01662	0.18	-0.3
1,745,448	+		MPMX19_01662	0.18	-0.1
1,745,448	+		MPMX19_01662	0.18	-0.5
1,745,448	+		MPMX19_01662	0.18	+0.8
1,745,448	+		MPMX19_01662	0.18	+0.3
1,745,449	-		MPMX19_01662	0.18	-0.2
1,745,449	-		MPMX19_01662	0.18	+2.1
1,745,449	-		MPMX19_01662	0.18	-0.8
1,745,449	-		MPMX19_01662	0.18	-0.9
1,745,449	-		MPMX19_01662	0.18	-0.7
1,745,449	-		MPMX19_01662	0.18	+0.1
1,745,449	-		MPMX19_01662	0.18	-2.2
1,745,449	-		MPMX19_01662	0.18	+1.0
1,745,449	-		MPMX19_01662	0.18	-0.7
1,745,449	-		MPMX19_01662	0.18	-0.7
1,745,449	-		MPMX19_01662	0.18	-0.3
1,745,671	+		MPMX19_01662	0.24	+0.3
1,745,671	+		MPMX19_01662	0.24	+0.5
1,745,671	+		MPMX19_01662	0.24	-0.3
1,745,671	+		MPMX19_01662	0.24	-1.6
1,745,671	+		MPMX19_01662	0.24	+1.7
1,745,671	+		MPMX19_01662	0.24	-0.5
1,745,671	+		MPMX19_01662	0.24	-0.4
1,745,671	+		MPMX19_01662	0.24	+0.5
1,745,672	-		MPMX19_01662	0.24	+0.7
1,745,672	-		MPMX19_01662	0.24	+0.4
1,745,672	-		MPMX19_01662	0.24	-1.1
1,745,672	-		MPMX19_01662	0.24	-0.3
1,745,672	-		MPMX19_01662	0.24	-0.6
1,745,672	-		MPMX19_01662	0.24	-0.7
1,745,672	-		MPMX19_01662	0.24	+0.5
1,745,672	-		MPMX19_01662	0.24	+0.6
1,745,673	+		MPMX19_01662	0.24	-0.7
1,745,673	+		MPMX19_01662	0.24	+0.3
1,745,673	+		MPMX19_01662	0.24	+1.3
1,745,673	+		MPMX19_01662	0.24	-0.3
1,745,673	+		MPMX19_01662	0.24	+1.1
1,745,673	+		MPMX19_01662	0.24	+0.5
1,745,673	+		MPMX19_01662	0.24	-0.3
1,745,673	+		MPMX19_01662	0.24	+0.7
1,745,673	+		MPMX19_01662	0.24	-1.2
1,745,673	+		MPMX19_01662	0.24	+0.5
1,745,673	+		MPMX19_01662	0.24	-1.2
1,745,673	+		MPMX19_01662	0.24	+1.3
1,745,673	+		MPMX19_01662	0.24	-0.6
1,745,673	+		MPMX19_01662	0.24	-0.6
1,745,674	-		MPMX19_01662	0.24	+0.9
1,745,674	-		MPMX19_01662	0.24	+2.1
1,745,674	-		MPMX19_01662	0.24	+0.3
1,745,674	-		MPMX19_01662	0.24	+0.2
1,745,674	-		MPMX19_01662	0.24	-0.7
1,745,674	-		MPMX19_01662	0.24	-0.8
1,745,674	-		MPMX19_01662	0.24	-0.4
1,745,674	-		MPMX19_01662	0.24	+1.6
1,745,674	-		MPMX19_01662	0.24	-1.3
1,745,674	-		MPMX19_01662	0.24	+0.1
1,745,674	-		MPMX19_01662	0.24	+0.5
1,745,674	-		MPMX19_01662	0.24	-0.8