Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01633

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,714,225	+		MPMX19_01632	0.63	-1.1
1,714,225	+		MPMX19_01632	0.63	-1.5
1,714,225	+		MPMX19_01632	0.63	+0.2
1,714,225	+		MPMX19_01632	0.63	-0.6
1,714,225	+		MPMX19_01632	0.63	-0.1
1,714,226	-		MPMX19_01632	0.64	-0.4
1,714,226	-		MPMX19_01632	0.64	-2.4
1,714,226	-		MPMX19_01632	0.64	+0.8
1,714,378	+		MPMX19_01632	0.71	+1.1
1,714,378	+		MPMX19_01632	0.71	-0.4
1,714,378	+		MPMX19_01632	0.71	-0.9
1,714,378	+		MPMX19_01632	0.71	-1.8
1,714,378	+		MPMX19_01632	0.71	-2.2
1,714,378	+		MPMX19_01632	0.71	+0.3
1,714,378	+		MPMX19_01632	0.71	+2.3
1,714,378	+		MPMX19_01632	0.71	+0.8
1,714,378	+		MPMX19_01632	0.71	+0.3
1,714,378	+		MPMX19_01632	0.71	-2.2
1,714,378	+		MPMX19_01632	0.71	-0.2
1,714,378	+		MPMX19_01632	0.71	-0.8
1,714,378	+		MPMX19_01632	0.71	-1.2
1,714,379	-		MPMX19_01632	0.72	+1.1
1,714,379	-		MPMX19_01632	0.72	-0.5
1,714,379	-		MPMX19_01632	0.72	+0.7
1,714,379	-		MPMX19_01632	0.72	+0.6
1,714,379	-		MPMX19_01632	0.72	-0.6
1,714,379	-		MPMX19_01632	0.72	+0.4
1,714,379	-		MPMX19_01632	0.72	-1.4
1,714,700	+		MPMX19_01632	0.88	-0.4
1,714,701	-		MPMX19_01632	0.88	-0.6
1,714,846	+				+1.2
1,714,846	+				-1.0
1,714,846	+				-0.9
1,714,846	+				+0.3
1,714,846	+				-0.0
1,714,846	+				+0.5
1,714,846	+				-0.7
1,714,846	+				-1.8
1,714,846	+				-1.2
1,714,846	+				+1.1
1,714,846	+				+0.8
1,714,846	+				+0.2
1,714,846	+				-0.8
1,714,846	+				+1.1
1,714,846	+				+0.7
1,714,846	+				-0.7
1,714,846	+				+0.4
1,714,846	+				+1.4
1,714,847	-				-0.5
1,714,847	-				-1.0
1,714,847	-				-0.1
1,714,847	-				-1.3
1,714,847	-				+0.3
1,714,847	-				-0.2
1,714,847	-				-0.5
1,714,847	-				-0.7
1,714,847	-				+0.1
1,714,847	-				-0.1
1,714,847	-				-1.3
1,714,847	-				+0.3
1,714,847	-				-2.2
1,714,847	-				+0.1
1,714,847	-				+0.5
1,714,847	-				-0.9
1,716,090	+				-0.2
1,716,090	+				+0.6
1,716,090	+				+0.9
1,716,090	+				+1.1
1,716,090	+				+0.5
1,716,091	-				+0.1
1,716,091	-				-0.8
1,716,091	-				-1.6
1,716,091	-				-0.3
1,716,091	-				+0.3
1,716,091	-				-0.7
1,716,091	-				+0.3
1,716,091	-				+0.1
1,716,222	+				-0.7
1,716,222	+				-0.5
1,716,222	+				-0.5
1,716,222	+				-0.6
1,716,222	+				+0.7
1,716,222	+				-0.9
1,716,222	+				-1.1
1,716,222	+				-0.3
1,716,222	+				-1.2
1,716,222	+				+0.1
1,716,223	-				+1.2
1,716,223	-				+0.5
1,716,223	-				+1.1
1,716,223	-				-2.3
1,716,223	-				-1.3
1,716,238	+				-1.3
1,716,238	+				-1.5
1,716,239	-				-0.7
1,716,239	-				+0.7
1,716,239	-				-0.4
1,716,239	-				-0.9
1,716,409	+		MPMX19_01634	0.28	-0.9
1,716,409	+		MPMX19_01634	0.28	+0.3
1,716,409	+		MPMX19_01634	0.28	-0.8
1,716,409	+		MPMX19_01634	0.28	-0.5
1,716,409	+		MPMX19_01634	0.28	+1.1
1,716,409	+		MPMX19_01634	0.28	+0.7
1,716,409	+		MPMX19_01634	0.28	-1.3
1,716,409	+		MPMX19_01634	0.28	-1.7
1,716,409	+		MPMX19_01634	0.28	-0.2
1,716,409	+		MPMX19_01634	0.28	-0.5
1,716,410	-		MPMX19_01634	0.28	-1.2
1,716,410	-		MPMX19_01634	0.28	-0.2
1,716,410	-		MPMX19_01634	0.28	-0.9
1,716,410	-		MPMX19_01634	0.28	-0.6
1,716,410	-		MPMX19_01634	0.28	-0.4
1,716,410	-		MPMX19_01634	0.28	-0.1
1,716,410	-		MPMX19_01634	0.28	+1.5
1,716,410	-		MPMX19_01634	0.28	-2.2
1,716,410	-		MPMX19_01634	0.28	-1.0
1,716,410	-		MPMX19_01634	0.28	-0.5
1,716,410	-		MPMX19_01634	0.28	-1.4
1,716,410	-		MPMX19_01634	0.28	-0.9
1,716,892	+				+0.7
1,716,892	+				+0.1
1,716,892	+				+0.3
1,716,892	+				+0.0
1,716,892	+				-0.2
1,716,893	-				-0.4
1,716,893	-				+0.5
1,716,893	-				-1.4
1,716,893	-				-0.8
1,716,893	-				+0.3
1,716,893	-				-0.3
1,717,029	+				+0.5
1,717,029	+				-1.1