Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01612

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,691,360	-		MPMX19_01611	0.45	-0.7
1,691,360	-		MPMX19_01611	0.45	-0.7
1,691,760	+				+0.6
1,691,760	+				-0.1
1,691,761	-				-0.4
1,691,761	-				-0.8
1,691,929	+				-1.4
1,691,929	+				+0.1
1,691,929	+				-1.1
1,691,929	+				-0.9
1,691,929	+				+0.1
1,691,929	+				+0.1
1,691,929	+				+0.1
1,691,929	+				-1.6
1,691,929	+				-0.2
1,691,929	+				-0.1
1,691,929	+				-0.0
1,691,929	+				-1.9
1,691,930	-				-1.4
1,691,930	-				+0.6
1,691,930	-				-0.4
1,691,930	-				-0.9
1,691,930	-				-0.2
1,691,930	-				-1.5
1,691,930	-				+0.0
1,691,930	-				+0.9
1,691,930	-				-1.5
1,691,930	-				+0.4
1,691,930	-				+1.1
1,691,930	-				-0.2
1,691,930	-				-0.2
1,691,943	+				-1.1
1,691,943	+				-0.5
1,691,943	+				-1.2
1,691,944	-				-0.0
1,691,944	-				-0.2
1,691,944	-				-1.7
1,691,960	+				-0.5
1,691,960	+				-0.1
1,691,960	+				+0.9
1,691,960	+				+0.3
1,691,960	+				-1.5
1,691,960	+				+0.5
1,691,961	-				-0.5
1,691,961	-				-0.1
1,691,961	-				-0.1
1,691,961	-				+0.3
1,691,961	-				-0.2
1,691,961	-				-0.8
1,691,961	-				-0.9
1,691,983	+				+0.9
1,691,983	+				-0.0
1,691,983	+				+1.1
1,691,983	+				-1.9
1,691,983	+				+0.1
1,691,983	+				+0.3
1,691,983	+				+0.5
1,691,983	+				+0.1
1,691,983	+				+0.7
1,691,983	+				-0.4
1,691,983	+				-1.2
1,691,983	+				-0.2
1,691,983	+				-0.6
1,691,983	+				-1.9
1,691,983	+				+0.5
1,691,983	+				-0.7
1,691,983	+				-0.6
1,691,983	+				-0.9
1,691,983	+				-1.2
1,691,983	+				-0.7
1,691,983	+				+1.0
1,691,983	+				+0.2
1,691,983	+				-0.4
1,691,983	+				+1.1
1,691,983	+				-1.4
1,691,983	+				+1.1
1,691,983	+				-1.7
1,691,983	+				-1.8
1,691,983	+				-0.5
1,691,983	+				-0.0
1,691,983	+				-1.3
1,691,983	+				+0.5
1,691,983	+				-0.6
1,691,984	-				-3.0
1,691,984	-				-0.2
1,691,984	-				-1.0
1,691,984	-				+0.3
1,691,984	-				-0.5
1,691,984	-				-0.3
1,691,984	-				+0.5
1,691,984	-				-1.2
1,691,984	-				-0.7
1,691,984	-				-0.8
1,691,984	-				-0.8
1,691,984	-				-1.1
1,691,984	-				-0.4
1,691,984	-				+0.7
1,691,984	-				-0.3
1,691,984	-				+0.5
1,691,984	-				+0.1
1,691,984	-				-0.7
1,691,984	-				+0.1
1,691,984	-				-0.2
1,691,984	-				-1.3
1,691,984	-				-1.4
1,691,984	-				+0.3
1,691,984	-				-0.5
1,691,984	-				-1.4
1,691,984	-				+1.4
1,691,984	-				-1.2
1,691,984	-				-1.3
1,691,984	-				+1.0
1,691,984	-				-1.3
1,691,984	-				+0.9
1,691,984	-				-1.7
1,691,984	-				-0.5
1,691,984	-				-1.0
1,691,984	-				-1.0
1,691,984	-				-1.2
1,691,984	-				+0.6
1,691,984	-				-0.9
1,691,984	-				+1.1
1,691,984	-				-1.0
1,691,984	-				+0.0
1,691,984	-				-1.3
1,692,153	+		MPMX19_01612	0.15	-0.5
1,692,153	+		MPMX19_01612	0.15	-1.1
1,692,153	+		MPMX19_01612	0.15	-0.3
1,692,153	+		MPMX19_01612	0.15	-2.2
1,692,153	+		MPMX19_01612	0.15	-0.8
1,692,153	+		MPMX19_01612	0.15	+0.2
1,692,153	+		MPMX19_01612	0.15	-0.2
1,692,153	+		MPMX19_01612	0.15	-0.7
1,692,153	+		MPMX19_01612	0.15	-0.9
1,692,153	+		MPMX19_01612	0.15	-0.2
1,692,153	+		MPMX19_01612	0.15	-0.2
1,692,153	+		MPMX19_01612	0.15	-0.4
1,692,154	-		MPMX19_01612	0.15	+1.1
1,692,154	-		MPMX19_01612	0.15	+2.1
1,692,154	-		MPMX19_01612	0.15	+0.3
1,692,154	-		MPMX19_01612	0.15	-1.8
1,692,154	-		MPMX19_01612	0.15	-2.4
1,692,154	-		MPMX19_01612	0.15	-2.0
1,692,154	-		MPMX19_01612	0.15	-0.0
1,692,154	-		MPMX19_01612	0.15	-0.5
1,692,154	-		MPMX19_01612	0.15	+0.5
1,692,154	-		MPMX19_01612	0.15	-1.9
1,692,154	-		MPMX19_01612	0.15	-1.6
1,692,351	+		MPMX19_01612	0.45	+0.4
1,692,351	+		MPMX19_01612	0.45	+0.0
1,692,351	+		MPMX19_01612	0.45	-0.9
1,692,351	+		MPMX19_01612	0.45	+0.4
1,692,351	+		MPMX19_01612	0.45	-1.0
1,692,351	+		MPMX19_01612	0.45	-0.2
1,692,352	-		MPMX19_01612	0.45	-1.1
1,692,352	-		MPMX19_01612	0.45	-0.7
1,692,352	-		MPMX19_01612	0.45	-1.9
1,692,352	-		MPMX19_01612	0.45	+0.3
1,692,352	-		MPMX19_01612	0.45	-1.4
1,692,353	+		MPMX19_01612	0.45	-0.2
1,692,354	-		MPMX19_01612	0.45	+0.5
1,692,354	-		MPMX19_01612	0.45	-0.8
1,692,354	-		MPMX19_01612	0.45	-0.9
1,692,354	-		MPMX19_01612	0.45	-0.2
1,692,354	-		MPMX19_01612	0.45	-2.0
1,692,354	-		MPMX19_01612	0.45	-0.5
1,692,420	+		MPMX19_01612	0.55	-1.2
1,692,420	+		MPMX19_01612	0.55	-1.2
1,692,420	+		MPMX19_01612	0.55	-2.3
1,692,420	+		MPMX19_01612	0.55	-2.5
1,692,420	+		MPMX19_01612	0.55	-0.7
1,692,420	+		MPMX19_01612	0.55	-0.1
1,692,420	+		MPMX19_01612	0.55	-0.6
1,692,420	+		MPMX19_01612	0.55	-0.6
1,692,420	+		MPMX19_01612	0.55	-0.5
1,692,420	+		MPMX19_01612	0.55	-1.2
1,692,421	-		MPMX19_01612	0.55	-1.4
1,692,421	-		MPMX19_01612	0.55	+0.2
1,692,421	-		MPMX19_01612	0.55	+0.3
1,692,421	-		MPMX19_01612	0.55	-0.7
1,692,720	+				-0.9
1,692,720	+				-0.2
1,692,720	+				+0.6
1,692,720	+				+0.3
1,692,721	-				+0.5
1,692,721	-				-0.0
1,692,721	-				-1.1
1,692,733	+				-0.7
1,692,751	-				+1.1
1,692,751	-				-0.3
1,692,881	+		MPMX19_01613	0.21	+1.1
1,692,881	+		MPMX19_01613	0.21	-1.2
1,692,881	+		MPMX19_01613	0.21	-0.9
1,692,881	+		MPMX19_01613	0.21	-0.8
1,692,881	+		MPMX19_01613	0.21	-0.7
1,692,881	+		MPMX19_01613	0.21	+0.1
1,692,881	+		MPMX19_01613	0.21	+0.1
1,692,881	+		MPMX19_01613	0.21	+0.3
1,692,881	+		MPMX19_01613	0.21	-0.5
1,692,882	-		MPMX19_01613	0.21	-1.4
1,692,882	-		MPMX19_01613	0.21	-0.6
1,692,882	-		MPMX19_01613	0.21	-1.1
1,692,882	-		MPMX19_01613	0.21	-0.9
1,692,882	-		MPMX19_01613	0.21	+0.1
1,693,497	-				-0.5
1,693,497	-				-0.1
1,693,528	+				-1.1
1,693,528	+				-0.7
1,693,529	-				+0.5
1,693,529	-				-0.2
1,693,529	-				-0.3
1,693,529	-				-0.7
1,693,529	-				-0.4