Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01576

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,648,908	-				-0.5
1,649,408	+				-0.2
1,649,501	+		MPMX19_01575	0.23	+2.1
1,649,501	+		MPMX19_01575	0.23	-0.6
1,649,501	+		MPMX19_01575	0.23	-0.9
1,649,501	+		MPMX19_01575	0.23	+1.7
1,649,501	+		MPMX19_01575	0.23	-0.2
1,649,501	+		MPMX19_01575	0.23	-1.1
1,649,501	+		MPMX19_01575	0.23	-0.6
1,649,501	+		MPMX19_01575	0.23	+0.1
1,649,501	+		MPMX19_01575	0.23	-0.9
1,649,502	-		MPMX19_01575	0.23	-0.4
1,649,502	-		MPMX19_01575	0.23	-1.9
1,649,502	-		MPMX19_01575	0.23	-0.5
1,649,502	-		MPMX19_01575	0.23	-0.7
1,649,502	-		MPMX19_01575	0.23	-1.5
1,649,546	+		MPMX19_01575	0.32	-0.2
1,649,546	+		MPMX19_01575	0.32	-0.7
1,649,546	+		MPMX19_01575	0.32	-0.6
1,649,546	+		MPMX19_01575	0.32	-1.4
1,649,546	+		MPMX19_01575	0.32	-0.5
1,649,546	+		MPMX19_01575	0.32	-1.1
1,649,546	+		MPMX19_01575	0.32	+0.1
1,649,547	-		MPMX19_01575	0.32	+0.3
1,649,547	-		MPMX19_01575	0.32	-0.2
1,649,547	-		MPMX19_01575	0.32	+0.1
1,649,547	-		MPMX19_01575	0.32	+1.1
1,649,547	-		MPMX19_01575	0.32	-0.9
1,649,597	+		MPMX19_01575	0.42	+1.1
1,649,597	+		MPMX19_01575	0.42	-1.3
1,649,597	+		MPMX19_01575	0.42	+0.3
1,649,597	+		MPMX19_01575	0.42	-1.8
1,649,598	-		MPMX19_01575	0.42	-0.5
1,649,598	-		MPMX19_01575	0.42	-0.4
1,649,598	-		MPMX19_01575	0.42	+0.5
1,649,598	-		MPMX19_01575	0.42	-0.1
1,649,598	-		MPMX19_01575	0.42	-3.7
1,649,598	-		MPMX19_01575	0.42	-0.7
1,649,598	-		MPMX19_01575	0.42	-1.4
1,649,600	+		MPMX19_01575	0.43	+0.5
1,649,600	+		MPMX19_01575	0.43	-0.4
1,649,600	+		MPMX19_01575	0.43	+1.5
1,649,600	+		MPMX19_01575	0.43	-1.4
1,649,601	-		MPMX19_01575	0.43	+0.8
1,649,601	-		MPMX19_01575	0.43	-1.1
1,649,882	+				-0.7
1,649,882	+				-1.5
1,649,882	+				-1.2
1,649,882	+				-2.6
1,649,882	+				+0.9
1,649,882	+				+0.3
1,649,882	+				+0.3
1,649,883	-				-1.4
1,649,883	-				-0.7
1,649,883	-				+0.3
1,649,883	-				-0.8
1,649,883	-				-1.8
1,649,921	+				+0.3
1,649,921	+				-1.9
1,649,921	+				-1.2
1,649,921	+				-1.2
1,649,921	+				-2.7
1,649,921	+				+1.1
1,649,921	+				-3.0
1,649,921	+				-0.1
1,649,922	-				-0.7
1,649,922	-				+0.5
1,649,922	-				-0.8
1,649,922	-				-0.3
1,649,922	-				+0.1
1,649,922	-				-0.9
1,649,990	+		MPMX19_01576	0.26	-1.2
1,650,044	+		MPMX19_01576	0.40	-1.9
1,650,045	-		MPMX19_01576	0.41	-0.9
1,650,137	+		MPMX19_01576	0.66	-1.7
1,650,137	+		MPMX19_01576	0.66	-1.8
1,650,137	+		MPMX19_01576	0.66	-0.5
1,650,137	+		MPMX19_01576	0.66	+0.1
1,650,137	+		MPMX19_01576	0.66	-0.8
1,650,137	+		MPMX19_01576	0.66	-0.5
1,650,137	+		MPMX19_01576	0.66	+1.3
1,650,138	-		MPMX19_01576	0.66	-0.7
1,650,138	-		MPMX19_01576	0.66	-0.0
1,650,138	-		MPMX19_01576	0.66	-1.0
1,650,138	-		MPMX19_01576	0.66	-0.8
1,650,138	-		MPMX19_01576	0.66	+0.1
1,650,138	-		MPMX19_01576	0.66	+0.7
1,650,138	-		MPMX19_01576	0.66	-0.0
1,650,138	-		MPMX19_01576	0.66	-2.3
1,650,141	-		MPMX19_01576	0.67	-1.6
1,650,257	+				-1.1
1,650,257	+				+0.9
1,650,257	+				-1.5
1,650,257	+				+0.4
1,650,257	+				+0.4
1,650,257	+				+0.2
1,650,257	+				-0.7
1,650,257	+				-0.0
1,650,257	+				-0.2
1,650,257	+				-1.0
1,650,257	+				-0.5
1,650,257	+				-0.9
1,650,258	-				+0.3
1,650,258	-				-0.6
1,650,258	-				-0.5
1,650,258	-				-1.5
1,650,258	-				-0.2
1,650,258	-				-1.1
1,650,258	-				-0.7
1,650,258	-				+0.2
1,650,258	-				+0.5
1,650,258	-				-0.7
1,650,289	+				-0.2
1,650,289	+				-1.1
1,650,289	+				+0.2
1,650,289	+				+0.9
1,650,289	+				+0.5
1,650,290	-				-1.4
1,650,290	-				+0.1
1,650,290	-				-1.0
1,650,290	-				+0.7
1,650,290	-				+0.7
1,650,290	-				+0.1
1,650,290	-				-0.8
1,650,298	+				-0.9
1,650,298	+				-0.5
1,650,298	+				-1.2
1,650,298	+				-1.5
1,650,299	-				+1.3
1,650,299	-				+0.6
1,650,299	-				+0.0
1,650,299	-				-0.3
1,650,299	-				-2.0
1,650,299	-				-0.6
1,650,302	+				-1.2
1,650,302	+				-1.4
1,650,302	+				+0.5
1,650,302	+				-0.2
1,650,302	+				-2.0
1,650,302	+				+0.1
1,650,302	+				-0.3
1,650,303	-				+0.2
1,650,303	-				-0.1
1,650,303	-				-0.7
1,650,303	-				-0.4
1,650,314	+				+0.5
1,650,314	+				-0.7
1,650,315	-				-0.7
1,650,315	-				-0.1
1,650,315	-				+0.3
1,650,520	+		MPMX19_01577	0.32	-0.5
1,650,520	+		MPMX19_01577	0.32	+0.3
1,650,520	+		MPMX19_01577	0.32	+1.3
1,650,520	+		MPMX19_01577	0.32	+0.1
1,650,521	-		MPMX19_01577	0.32	+1.1
1,650,521	-		MPMX19_01577	0.32	-0.5
1,650,521	-		MPMX19_01577	0.32	+1.7
1,650,568	+		MPMX19_01577	0.39	-0.4
1,650,569	-		MPMX19_01577	0.39	+1.2
1,650,569	-		MPMX19_01577	0.39	-0.5
1,650,569	-		MPMX19_01577	0.39	-0.7
1,650,577	+		MPMX19_01577	0.40	+0.1
1,650,578	-		MPMX19_01577	0.40	+0.5
1,650,578	-		MPMX19_01577	0.40	-0.2
1,650,578	-		MPMX19_01577	0.40	+0.8
1,650,578	-		MPMX19_01577	0.40	-1.0
1,650,578	-		MPMX19_01577	0.40	+0.1
1,650,673	+		MPMX19_01577	0.54	-0.2
1,650,674	-		MPMX19_01577	0.54	-0.2
1,650,674	-		MPMX19_01577	0.54	-0.9
1,650,674	-		MPMX19_01577	0.54	-1.5
1,650,674	-		MPMX19_01577	0.54	-0.8
1,650,674	-		MPMX19_01577	0.54	-0.7
1,650,724	+		MPMX19_01577	0.61	+0.1
1,650,992	+				-0.9
1,650,992	+				+0.5
1,650,992	+				+0.1
1,650,993	-				-1.6
1,650,993	-				+0.1
1,650,993	-				+0.1
1,650,993	-				-1.4
1,650,993	-				-0.0
1,650,993	-				+0.2
1,650,993	-				-0.5
1,650,993	-				+0.6
1,650,993	-				-0.0
1,650,993	-				+0.2
1,650,993	-				-1.7
1,651,129	+		MPMX19_01578	0.21	+0.4
1,651,129	+		MPMX19_01578	0.21	-0.2
1,651,129	+		MPMX19_01578	0.21	-2.6
1,651,129	+		MPMX19_01578	0.21	+0.5
1,651,129	+		MPMX19_01578	0.21	-0.8
1,651,129	+		MPMX19_01578	0.21	+0.8
1,651,129	+		MPMX19_01578	0.21	+0.1
1,651,129	+		MPMX19_01578	0.21	+0.7
1,651,129	+		MPMX19_01578	0.21	-0.7
1,651,129	+		MPMX19_01578	0.21	-1.2
1,651,129	+		MPMX19_01578	0.21	+0.1
1,651,129	+		MPMX19_01578	0.21	+1.6
1,651,129	+		MPMX19_01578	0.21	-0.0
1,651,130	-		MPMX19_01578	0.21	-1.6
1,651,130	-		MPMX19_01578	0.21	-0.4
1,651,130	-		MPMX19_01578	0.21	-1.1
1,651,130	-		MPMX19_01578	0.21	+0.9
1,651,130	-		MPMX19_01578	0.21	-0.6
1,651,130	-		MPMX19_01578	0.21	-0.8
1,651,130	-		MPMX19_01578	0.21	-0.4
1,651,130	-		MPMX19_01578	0.21	+0.9
1,651,130	-		MPMX19_01578	0.21	-1.2
1,651,130	-		MPMX19_01578	0.21	+0.5
1,651,130	-		MPMX19_01578	0.21	-0.0
1,651,130	-		MPMX19_01578	0.21	+0.1
1,651,222	+		MPMX19_01578	0.38	+0.6
1,651,222	+		MPMX19_01578	0.38	-1.6
1,651,222	+		MPMX19_01578	0.38	-1.2
1,651,223	-		MPMX19_01578	0.38	+0.8
1,651,232	-		MPMX19_01578	0.40	-0.2
1,651,246	+		MPMX19_01578	0.43	-1.1
1,651,247	-		MPMX19_01578	0.43	+0.2
1,651,247	-		MPMX19_01578	0.43	-1.3