Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01536

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,606,783	-				-1.1
1,606,811	-				+0.6
1,606,811	-				-0.2
1,606,811	-				-1.2
1,607,175	+		MPMX19_01536	0.23	+0.3
1,607,175	+		MPMX19_01536	0.23	-1.9
1,607,175	+		MPMX19_01536	0.23	-0.5
1,607,175	+		MPMX19_01536	0.23	+0.3
1,607,175	+		MPMX19_01536	0.23	-1.1
1,607,175	+		MPMX19_01536	0.23	+0.8
1,607,175	+		MPMX19_01536	0.23	-1.2
1,607,175	+		MPMX19_01536	0.23	-1.1
1,607,175	+		MPMX19_01536	0.23	+1.1
1,607,176	-		MPMX19_01536	0.23	+0.7
1,607,176	-		MPMX19_01536	0.23	-0.9
1,607,176	-		MPMX19_01536	0.23	-1.4
1,607,176	-		MPMX19_01536	0.23	+0.5
1,607,176	-		MPMX19_01536	0.23	-1.1
1,607,176	-		MPMX19_01536	0.23	+0.9
1,607,176	-		MPMX19_01536	0.23	-1.6
1,607,176	-		MPMX19_01536	0.23	-1.0
1,607,176	-		MPMX19_01536	0.23	+0.0
1,607,274	+		MPMX19_01536	0.41	+0.8
1,607,274	+		MPMX19_01536	0.41	-0.2
1,607,274	+		MPMX19_01536	0.41	+0.4
1,607,274	+		MPMX19_01536	0.41	-0.5
1,607,274	+		MPMX19_01536	0.41	+0.1
1,607,274	+		MPMX19_01536	0.41	-2.7
1,607,274	+		MPMX19_01536	0.41	-1.5
1,607,274	+		MPMX19_01536	0.41	-1.2
1,607,274	+		MPMX19_01536	0.41	-1.1
1,607,274	+		MPMX19_01536	0.41	-0.3
1,607,274	+		MPMX19_01536	0.41	+0.1
1,607,274	+		MPMX19_01536	0.41	+1.9
1,607,274	+		MPMX19_01536	0.41	+0.7
1,607,274	+		MPMX19_01536	0.41	+0.4
1,607,274	+		MPMX19_01536	0.41	-1.8
1,607,274	+		MPMX19_01536	0.41	-0.4
1,607,274	+		MPMX19_01536	0.41	+0.5
1,607,274	+		MPMX19_01536	0.41	-1.8
1,607,275	-		MPMX19_01536	0.41	-1.2
1,607,275	-		MPMX19_01536	0.41	-1.5
1,607,275	-		MPMX19_01536	0.41	-0.9
1,607,275	-		MPMX19_01536	0.41	-0.8
1,607,275	-		MPMX19_01536	0.41	-0.2
1,607,275	-		MPMX19_01536	0.41	-0.3
1,607,275	-		MPMX19_01536	0.41	-0.2
1,607,275	-		MPMX19_01536	0.41	-0.5
1,607,275	-		MPMX19_01536	0.41	-2.2
1,607,275	-		MPMX19_01536	0.41	-2.4
1,607,275	-		MPMX19_01536	0.41	-0.2
1,607,275	-		MPMX19_01536	0.41	-1.8
1,607,275	-		MPMX19_01536	0.41	-0.7
1,607,275	-		MPMX19_01536	0.41	+1.3
1,607,275	-		MPMX19_01536	0.41	+1.1
1,607,275	-		MPMX19_01536	0.41	-0.8
1,607,275	-		MPMX19_01536	0.41	-1.9
1,607,310	+		MPMX19_01536	0.47	-1.1
1,607,310	+		MPMX19_01536	0.47	-0.4
1,607,311	-		MPMX19_01536	0.48	+0.5
1,607,361	+		MPMX19_01536	0.57	-0.0
1,607,361	+		MPMX19_01536	0.57	-0.0
1,607,446	+		MPMX19_01536	0.72	-0.3
1,607,446	+		MPMX19_01536	0.72	+0.1
1,607,446	+		MPMX19_01536	0.72	-2.1
1,607,446	+		MPMX19_01536	0.72	-1.2
1,607,446	+		MPMX19_01536	0.72	-0.7
1,607,446	+		MPMX19_01536	0.72	-1.9
1,607,446	+		MPMX19_01536	0.72	-1.2
1,607,446	+		MPMX19_01536	0.72	+0.5
1,607,446	+		MPMX19_01536	0.72	-0.7
1,607,446	+		MPMX19_01536	0.72	-1.0
1,607,446	+		MPMX19_01536	0.72	-0.4
1,607,446	+		MPMX19_01536	0.72	-1.2
1,607,446	+		MPMX19_01536	0.72	-1.8
1,607,447	-		MPMX19_01536	0.72	-0.7
1,607,447	-		MPMX19_01536	0.72	-1.4
1,607,447	-		MPMX19_01536	0.72	+0.5
1,607,447	-		MPMX19_01536	0.72	+0.3
1,607,447	-		MPMX19_01536	0.72	-1.5
1,607,447	-		MPMX19_01536	0.72	-1.3
1,607,447	-		MPMX19_01536	0.72	-0.8
1,607,469	+		MPMX19_01536	0.76	+2.1
1,607,469	+		MPMX19_01536	0.76	-1.2
1,607,469	+		MPMX19_01536	0.76	-0.5
1,607,469	+		MPMX19_01536	0.76	-1.0
1,607,469	+		MPMX19_01536	0.76	+0.1
1,607,469	+		MPMX19_01536	0.76	-1.1
1,607,469	+		MPMX19_01536	0.76	+2.1
1,607,469	+		MPMX19_01536	0.76	-1.4
1,607,469	+		MPMX19_01536	0.76	-1.8
1,607,470	-		MPMX19_01536	0.76	-2.2
1,607,470	-		MPMX19_01536	0.76	+1.3
1,607,470	-		MPMX19_01536	0.76	+0.1
1,607,470	-		MPMX19_01536	0.76	+0.3
1,607,696	+				+1.1
1,607,696	+				-1.5
1,607,697	-				+0.8
1,607,697	-				+1.7
1,607,697	-				-1.2
1,607,697	-				-1.4
1,607,709	+				-0.6
1,607,709	+				-2.2
1,607,709	+				-1.7
1,607,709	+				+0.6
1,607,709	+				+1.1
1,607,709	+				+0.3
1,607,709	+				+0.9
1,607,709	+				+0.7
1,607,709	+				-1.4
1,607,709	+				-1.4
1,607,709	+				-0.5
1,607,710	-				+0.8
1,607,710	-				-0.1
1,607,710	-				-0.5
1,607,710	-				+0.3
1,607,710	-				-0.3
1,607,710	-				+0.1
1,607,710	-				+2.5
1,607,710	-				+0.1
1,607,710	-				-0.9
1,607,710	-				-0.1
1,607,710	-				-0.9
1,607,710	-				-0.9
1,607,718	+				-0.8
1,607,718	+				-0.6
1,607,719	-				-0.7
1,607,719	-				+0.6
1,607,763	+				-0.5
1,607,763	+				+0.3
1,607,763	+				+0.5
1,607,763	+				-1.8
1,607,763	+				-0.2
1,607,764	-				-0.2
1,607,764	-				-0.0
1,607,764	-				-1.4
1,607,764	-				-0.8
1,607,764	-				-0.7
1,607,764	-				-0.7
1,607,764	-				+1.2
1,607,764	-				-1.8
1,607,764	-				+0.4
1,607,764	-				-0.9