Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01529

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,601,717	+		MPMX19_01528	0.28	+0.2
1,601,717	+		MPMX19_01528	0.28	-1.0
1,601,717	+		MPMX19_01528	0.28	-0.2
1,601,717	+		MPMX19_01528	0.28	+0.8
1,601,717	+		MPMX19_01528	0.28	-0.2
1,601,717	+		MPMX19_01528	0.28	-0.5
1,601,717	+		MPMX19_01528	0.28	-0.2
1,601,717	+		MPMX19_01528	0.28	-0.7
1,601,717	+		MPMX19_01528	0.28	-1.2
1,601,717	+		MPMX19_01528	0.28	-0.6
1,601,717	+		MPMX19_01528	0.28	-0.6
1,601,717	+		MPMX19_01528	0.28	+0.4
1,601,717	+		MPMX19_01528	0.28	-0.2
1,601,717	+		MPMX19_01528	0.28	-0.3
1,601,718	-		MPMX19_01528	0.28	-0.1
1,601,718	-		MPMX19_01528	0.28	-1.2
1,601,718	-		MPMX19_01528	0.28	+1.1
1,601,718	-		MPMX19_01528	0.28	+0.1
1,601,718	-		MPMX19_01528	0.28	-0.8
1,601,718	-		MPMX19_01528	0.28	-1.7
1,601,718	-		MPMX19_01528	0.28	-1.1
1,601,718	-		MPMX19_01528	0.28	-0.7
1,601,718	-		MPMX19_01528	0.28	+0.4
1,601,718	-		MPMX19_01528	0.28	+1.3
1,601,718	-		MPMX19_01528	0.28	-0.1
1,601,718	-		MPMX19_01528	0.28	-0.7
1,601,718	-		MPMX19_01528	0.28	-1.1
1,601,810	+		MPMX19_01528	0.35	+0.8
1,601,810	+		MPMX19_01528	0.35	+1.3
1,601,810	+		MPMX19_01528	0.35	-1.2
1,601,810	+		MPMX19_01528	0.35	-0.2
1,601,811	-		MPMX19_01528	0.35	-1.0
1,601,811	-		MPMX19_01528	0.35	-0.7
1,601,811	-		MPMX19_01528	0.35	-1.4
1,601,811	-		MPMX19_01528	0.35	+1.1
1,601,811	-		MPMX19_01528	0.35	+1.6
1,601,846	+		MPMX19_01528	0.38	+2.3
1,601,846	+		MPMX19_01528	0.38	+1.1
1,601,846	+		MPMX19_01528	0.38	+0.5
1,601,846	+		MPMX19_01528	0.38	+0.3
1,601,847	-		MPMX19_01528	0.38	+0.3
1,601,847	-		MPMX19_01528	0.38	-0.5
1,601,847	-		MPMX19_01528	0.38	-0.2
1,601,847	-		MPMX19_01528	0.38	+0.6
1,601,847	-		MPMX19_01528	0.38	-1.2
1,601,847	-		MPMX19_01528	0.38	-2.2
1,601,847	-		MPMX19_01528	0.38	-2.5
1,601,847	-		MPMX19_01528	0.38	-3.3
1,601,852	+		MPMX19_01528	0.38	+1.2
1,601,852	+		MPMX19_01528	0.38	-1.8
1,601,852	+		MPMX19_01528	0.38	-0.7
1,601,852	+		MPMX19_01528	0.38	-0.9
1,601,852	+		MPMX19_01528	0.38	+0.7
1,601,852	+		MPMX19_01528	0.38	+0.2
1,601,852	+		MPMX19_01528	0.38	-0.2
1,601,852	+		MPMX19_01528	0.38	+0.3
1,601,853	-		MPMX19_01528	0.38	-0.2
1,601,853	-		MPMX19_01528	0.38	-1.8
1,601,853	-		MPMX19_01528	0.38	-0.2
1,601,912	+		MPMX19_01528	0.43	-0.6
1,601,912	+		MPMX19_01528	0.43	+0.3
1,601,912	+		MPMX19_01528	0.43	-1.1
1,601,912	+		MPMX19_01528	0.43	+0.6
1,601,912	+		MPMX19_01528	0.43	-0.8
1,601,912	+		MPMX19_01528	0.43	-0.9
1,601,912	+		MPMX19_01528	0.43	-0.2
1,601,912	+		MPMX19_01528	0.43	-0.5
1,601,912	+		MPMX19_01528	0.43	-0.6
1,601,912	+		MPMX19_01528	0.43	-2.4
1,601,912	+		MPMX19_01528	0.43	-0.8
1,601,912	+		MPMX19_01528	0.43	+0.3
1,601,912	+		MPMX19_01528	0.43	+0.4
1,601,912	+		MPMX19_01528	0.43	-0.9
1,601,912	+		MPMX19_01528	0.43	-1.1
1,601,912	+		MPMX19_01528	0.43	+0.9
1,601,912	+		MPMX19_01528	0.43	-0.2
1,601,912	+		MPMX19_01528	0.43	-0.2
1,601,912	+		MPMX19_01528	0.43	-1.1
1,601,912	+		MPMX19_01528	0.43	+0.1
1,601,912	+		MPMX19_01528	0.43	+0.3
1,601,912	+		MPMX19_01528	0.43	-0.9
1,601,912	+		MPMX19_01528	0.43	-0.5
1,601,912	+		MPMX19_01528	0.43	-0.5
1,601,912	+		MPMX19_01528	0.43	+0.8
1,601,912	+		MPMX19_01528	0.43	-0.6
1,601,912	+		MPMX19_01528	0.43	+0.4
1,601,912	+		MPMX19_01528	0.43	-0.2
1,601,912	+		MPMX19_01528	0.43	+0.3
1,601,913	-		MPMX19_01528	0.43	+0.5
1,601,913	-		MPMX19_01528	0.43	+0.3
1,601,913	-		MPMX19_01528	0.43	-0.7
1,601,913	-		MPMX19_01528	0.43	-1.2
1,601,913	-		MPMX19_01528	0.43	+1.5
1,601,913	-		MPMX19_01528	0.43	-2.6
1,601,913	-		MPMX19_01528	0.43	-0.5
1,601,913	-		MPMX19_01528	0.43	-1.5
1,601,913	-		MPMX19_01528	0.43	+0.0
1,601,913	-		MPMX19_01528	0.43	-0.6
1,601,913	-		MPMX19_01528	0.43	+0.9
1,601,913	-		MPMX19_01528	0.43	+0.6
1,601,913	-		MPMX19_01528	0.43	-1.0
1,601,913	-		MPMX19_01528	0.43	-0.2
1,601,913	-		MPMX19_01528	0.43	+0.1
1,601,913	-		MPMX19_01528	0.43	-0.5
1,601,913	-		MPMX19_01528	0.43	-0.3
1,601,913	-		MPMX19_01528	0.43	-0.1
1,601,913	-		MPMX19_01528	0.43	-0.5
1,601,913	-		MPMX19_01528	0.43	-1.5
1,601,913	-		MPMX19_01528	0.43	-0.4
1,601,913	-		MPMX19_01528	0.43	-1.2
1,601,913	-		MPMX19_01528	0.43	-0.2
1,601,913	-		MPMX19_01528	0.43	-0.2
1,601,913	-		MPMX19_01528	0.43	+1.1
1,601,936	+		MPMX19_01528	0.45	+1.0
1,601,936	+		MPMX19_01528	0.45	-0.2
1,601,936	+		MPMX19_01528	0.45	+0.3
1,601,937	-		MPMX19_01528	0.45	-1.4
1,601,937	-		MPMX19_01528	0.45	-0.1
1,602,406	+		MPMX19_01528	0.80	-1.4
1,602,666	+				-1.2
1,602,666	+				+0.4
1,602,702	+				-0.7
1,602,702	+				-0.6
1,602,702	+				-1.4
1,602,702	+				-0.2
1,602,702	+				+0.5
1,602,703	-				-1.6
1,602,703	-				-0.9
1,602,703	-				+0.8
1,602,703	-				-1.8
1,602,721	-		MPMX19_01529	0.12	-1.2
1,603,036	+				-0.2
1,603,036	+				-0.1
1,603,036	+				+0.6
1,603,036	+				+0.2
1,603,036	+				-1.5
1,603,036	+				-1.8
1,603,036	+				-0.9
1,603,036	+				-0.6
1,603,036	+				+0.1
1,603,036	+				-0.4
1,603,036	+				-0.9
1,603,036	+				+0.8
1,603,036	+				-0.2
1,603,036	+				-2.0
1,603,036	+				-1.1
1,603,037	-				+1.3
1,603,037	-				-0.2
1,603,037	-				-1.7
1,603,037	-				+0.7
1,603,037	-				+0.8
1,603,037	-				-0.8
1,603,037	-				+0.3
1,603,037	-				-0.4
1,603,052	+				-0.1
1,603,052	+				+0.1
1,603,052	+				+1.1
1,603,052	+				-1.2
1,603,052	+				-1.1
1,603,052	+				-0.4
1,603,052	+				+0.4
1,603,052	+				-1.5
1,603,052	+				+0.9
1,603,052	+				-0.2
1,603,052	+				-0.2
1,603,052	+				-0.4
1,603,053	-				+0.3
1,603,053	-				+0.8
1,603,053	-				-0.2
1,603,053	-				-0.2
1,603,053	-				+0.1
1,603,053	-				-0.6
1,603,053	-				-0.4
1,603,053	-				+0.1
1,603,053	-				+1.1
1,603,053	-				+0.8
1,603,053	-				+0.1
1,603,053	-				-1.1
1,603,053	-				+0.3
1,603,053	-				-1.4
1,603,053	-				-0.2
1,603,131	+		MPMX19_01530	0.13	-2.2
1,603,131	+		MPMX19_01530	0.13	+0.1
1,603,131	+		MPMX19_01530	0.13	-1.6
1,603,131	+		MPMX19_01530	0.13	-0.8
1,603,132	-		MPMX19_01530	0.14	-0.0
1,603,132	-		MPMX19_01530	0.14	-1.5
1,603,132	-		MPMX19_01530	0.14	+0.2
1,603,132	-		MPMX19_01530	0.14	-0.1
1,603,132	-		MPMX19_01530	0.14	+0.2
1,603,132	-		MPMX19_01530	0.14	+0.1
1,603,132	-		MPMX19_01530	0.14	+0.2
1,603,145	+		MPMX19_01530	0.17	-2.1
1,603,145	+		MPMX19_01530	0.17	-0.9
1,603,145	+		MPMX19_01530	0.17	+0.7
1,603,145	+		MPMX19_01530	0.17	-0.7
1,603,145	+		MPMX19_01530	0.17	-0.4
1,603,146	-		MPMX19_01530	0.18	-1.1
1,603,146	-		MPMX19_01530	0.18	-0.3
1,603,146	-		MPMX19_01530	0.18	-1.4
1,603,146	-		MPMX19_01530	0.18	-0.0
1,603,146	-		MPMX19_01530	0.18	-1.1
1,603,146	-		MPMX19_01530	0.18	+0.5
1,603,146	-		MPMX19_01530	0.18	-0.1
1,603,441	+				-0.6
1,603,441	+				-1.4
1,603,442	-				-2.2
1,603,442	-				-0.7
1,603,442	-				+1.0
1,603,442	-				+1.6
1,603,442	-				-0.6
1,603,442	-				-0.2
1,603,610	+		MPMX19_01531	0.18	+0.5
1,603,610	+		MPMX19_01531	0.18	-1.6
1,603,610	+		MPMX19_01531	0.18	-0.5
1,603,611	-		MPMX19_01531	0.18	-0.4
1,603,611	-		MPMX19_01531	0.18	+0.5
1,603,611	-		MPMX19_01531	0.18	+0.1
1,603,611	-		MPMX19_01531	0.18	-0.4
1,603,637	+		MPMX19_01531	0.22	+0.1
1,603,637	+		MPMX19_01531	0.22	+0.3
1,603,637	+		MPMX19_01531	0.22	-1.5
1,603,637	+		MPMX19_01531	0.22	-0.6
1,603,637	+		MPMX19_01531	0.22	-0.5
1,603,637	+		MPMX19_01531	0.22	-0.2
1,603,637	+		MPMX19_01531	0.22	-1.4
1,603,637	+		MPMX19_01531	0.22	-1.2
1,603,637	+		MPMX19_01531	0.22	-1.9
1,603,637	+		MPMX19_01531	0.22	-1.6
1,603,637	+		MPMX19_01531	0.22	+0.3
1,603,637	+		MPMX19_01531	0.22	-0.7
1,603,637	+		MPMX19_01531	0.22	-0.1
1,603,637	+		MPMX19_01531	0.22	+0.2
1,603,637	+		MPMX19_01531	0.22	-0.2
1,603,637	+		MPMX19_01531	0.22	-0.9
1,603,637	+		MPMX19_01531	0.22	-2.0
1,603,637	+		MPMX19_01531	0.22	-0.6
1,603,637	+		MPMX19_01531	0.22	-0.6
1,603,637	+		MPMX19_01531	0.22	-0.7
1,603,637	+		MPMX19_01531	0.22	+0.1
1,603,637	+		MPMX19_01531	0.22	-0.7
1,603,638	-		MPMX19_01531	0.23	-1.2
1,603,638	-		MPMX19_01531	0.23	+0.2
1,603,638	-		MPMX19_01531	0.23	-1.4
1,603,638	-		MPMX19_01531	0.23	+0.1
1,603,638	-		MPMX19_01531	0.23	-0.1
1,603,638	-		MPMX19_01531	0.23	-0.3
1,603,638	-		MPMX19_01531	0.23	-0.4
1,603,638	-		MPMX19_01531	0.23	+1.1
1,603,638	-		MPMX19_01531	0.23	-1.1
1,603,638	-		MPMX19_01531	0.23	-0.7
1,603,638	-		MPMX19_01531	0.23	-0.5
1,603,638	-		MPMX19_01531	0.23	-1.3
1,603,638	-		MPMX19_01531	0.23	+0.2
1,603,638	-		MPMX19_01531	0.23	-0.1
1,603,638	-		MPMX19_01531	0.23	+0.1
1,603,727	+		MPMX19_01531	0.38	-0.8
1,603,727	+		MPMX19_01531	0.38	-2.1
1,603,727	+		MPMX19_01531	0.38	-0.2
1,603,728	-		MPMX19_01531	0.38	-0.7
1,603,728	-		MPMX19_01531	0.38	-1.5
1,603,820	+		MPMX19_01531	0.54	-1.2
1,603,820	+		MPMX19_01531	0.54	-1.9
1,603,820	+		MPMX19_01531	0.54	+0.2
1,603,821	-		MPMX19_01531	0.54	-2.3
1,603,821	-		MPMX19_01531	0.54	-0.0
1,603,821	-		MPMX19_01531	0.54	-0.7
1,603,821	-		MPMX19_01531	0.54	-0.7
1,603,821	-		MPMX19_01531	0.54	-0.0
1,603,859	+		MPMX19_01531	0.61	-1.1
1,603,859	+		MPMX19_01531	0.61	-1.4
1,603,859	+		MPMX19_01531	0.61	-0.9
1,603,859	+		MPMX19_01531	0.61	-0.5
1,603,859	+		MPMX19_01531	0.61	+0.3
1,603,859	+		MPMX19_01531	0.61	-0.7
1,603,859	+		MPMX19_01531	0.61	-0.4
1,603,859	+		MPMX19_01531	0.61	-0.4
1,603,859	+		MPMX19_01531	0.61	-1.8
1,603,859	+		MPMX19_01531	0.61	-1.1
1,603,859	+		MPMX19_01531	0.61	-1.1
1,603,859	+		MPMX19_01531	0.61	-0.2
1,603,859	+		MPMX19_01531	0.61	-0.7
1,603,859	+		MPMX19_01531	0.61	-0.9
1,603,859	+		MPMX19_01531	0.61	-0.5
1,603,860	-		MPMX19_01531	0.61	-0.9
1,603,860	-		MPMX19_01531	0.61	-0.5
1,603,860	-		MPMX19_01531	0.61	-2.3
1,603,860	-		MPMX19_01531	0.61	-0.9
1,603,860	-		MPMX19_01531	0.61	+0.6
1,603,860	-		MPMX19_01531	0.61	-0.5
1,603,860	-		MPMX19_01531	0.61	-0.2
1,603,860	-		MPMX19_01531	0.61	+0.9
1,603,860	-		MPMX19_01531	0.61	-2.4
1,603,860	-		MPMX19_01531	0.61	-1.2
1,603,860	-		MPMX19_01531	0.61	-0.8
1,603,860	-		MPMX19_01531	0.61	+0.8
1,603,860	-		MPMX19_01531	0.61	-0.6
1,603,860	-		MPMX19_01531	0.61	-0.4
1,603,874	+		MPMX19_01531	0.63	-0.8
1,603,874	+		MPMX19_01531	0.63	-1.0
1,603,875	-		MPMX19_01531	0.64	-1.4
1,603,875	-		MPMX19_01531	0.64	-1.4
1,603,875	-		MPMX19_01531	0.64	-2.3
1,603,875	-		MPMX19_01531	0.64	-1.2
1,603,922	+		MPMX19_01531	0.72	-0.8
1,603,922	+		MPMX19_01531	0.72	-1.2
1,603,922	+		MPMX19_01531	0.72	-2.0
1,603,922	+		MPMX19_01531	0.72	+0.7
1,603,922	+		MPMX19_01531	0.72	-0.8
1,603,922	+		MPMX19_01531	0.72	+0.1
1,603,923	-		MPMX19_01531	0.72	+0.1
1,603,923	-		MPMX19_01531	0.72	+0.9
1,603,923	-		MPMX19_01531	0.72	-0.6
1,603,923	-		MPMX19_01531	0.72	-0.5
1,603,923	-		MPMX19_01531	0.72	-0.4
1,603,923	-		MPMX19_01531	0.72	+0.5
1,603,923	-		MPMX19_01531	0.72	-1.2