Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01522

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,594,870	+				-1.5
1,594,871	-				-0.2
1,594,871	-				-1.3
1,594,871	-				-1.1
1,594,871	-				+0.9
1,594,871	-				+1.5
1,594,872	+				-1.3
1,594,872	+				+0.2
1,594,872	+				+0.8
1,594,872	+				+0.5
1,594,872	+				-1.6
1,594,872	+				-1.3
1,594,872	+				-1.5
1,594,872	+				-0.9
1,594,872	+				-1.3
1,594,872	+				-0.3
1,594,872	+				-1.8
1,594,873	-				-0.9
1,594,873	-				+0.3
1,594,873	-				-0.9
1,594,873	-				-0.3
1,594,873	-				+0.1
1,594,873	-				+0.1
1,594,873	-				-0.7
1,594,873	-				-0.9
1,594,873	-				-0.9
1,594,873	-				+1.3
1,594,880	+				-1.0
1,594,880	+				+0.3
1,594,881	-				+0.7
1,594,881	-				-1.3
1,594,881	-				-1.2
1,594,907	+				+2.1
1,594,908	-				-0.8
1,594,908	-				-1.3
1,594,908	-				-0.9
1,594,908	-				+1.1
1,594,908	-				-1.3
1,594,962	+				+0.3
1,594,962	+				-1.6
1,594,962	+				+0.4
1,594,962	+				-0.7
1,594,962	+				-0.5
1,594,962	+				-1.2
1,594,962	+				-0.5
1,594,962	+				-0.3
1,594,962	+				-0.1
1,594,963	-				+0.3
1,594,963	-				-0.5
1,594,963	-				+0.3
1,594,963	-				+0.5
1,594,963	-				-0.4
1,595,001	+				-0.8
1,595,001	+				-0.4
1,595,001	+				+0.7
1,595,002	-				+0.7
1,595,002	-				+1.3
1,595,002	-				-1.4
1,595,002	-				-1.4
1,595,002	-				-0.7
1,595,002	-				+2.1
1,595,002	-				-0.1
1,595,002	-				-0.2
1,595,002	-				-1.6
1,595,388	+		MPMX19_01521	0.58	-0.6
1,595,388	+		MPMX19_01521	0.58	-1.3
1,595,388	+		MPMX19_01521	0.58	-0.0
1,595,388	+		MPMX19_01521	0.58	-0.6
1,595,388	+		MPMX19_01521	0.58	-0.3
1,595,389	-		MPMX19_01521	0.58	-1.8
1,595,389	-		MPMX19_01521	0.58	-1.3
1,595,389	-		MPMX19_01521	0.58	-0.7
1,595,389	-		MPMX19_01521	0.58	-1.3
1,595,389	-		MPMX19_01521	0.58	+1.1
1,595,592	+		MPMX19_01521	0.89	-0.3
1,595,592	+		MPMX19_01521	0.89	+0.2
1,595,592	+		MPMX19_01521	0.89	-0.5
1,595,592	+		MPMX19_01521	0.89	-0.2
1,595,592	+		MPMX19_01521	0.89	-0.1
1,595,593	-		MPMX19_01521	0.89	+0.3
1,595,593	-		MPMX19_01521	0.89	-0.5
1,595,593	-		MPMX19_01521	0.89	+1.1
1,595,593	-		MPMX19_01521	0.89	-0.5
1,595,593	-		MPMX19_01521	0.89	-0.2
1,595,593	-		MPMX19_01521	0.89	+0.6
1,595,593	-		MPMX19_01521	0.89	+0.7
1,595,593	-		MPMX19_01521	0.89	+1.1
1,595,593	-		MPMX19_01521	0.89	-1.2
1,595,593	-		MPMX19_01521	0.89	-0.4
1,595,593	-		MPMX19_01521	0.89	-0.9
1,595,593	-		MPMX19_01521	0.89	-0.8
1,595,838	+				-0.4
1,595,838	+				-3.0
1,595,838	+				-0.3
1,595,838	+				+0.8
1,595,838	+				-0.1
1,595,838	+				-2.1
1,595,838	+				-0.3
1,595,838	+				-1.3
1,595,838	+				-0.6
1,595,838	+				-0.0
1,595,838	+				-0.0
1,595,839	-				-0.0
1,595,839	-				-1.0
1,595,839	-				-0.1
1,595,839	-				-1.3
1,595,839	-				-0.7
1,595,839	-				-1.1
1,595,839	-				+0.1
1,595,839	-				-0.0
1,596,141	+		MPMX19_01522	0.27	-0.7
1,596,141	+		MPMX19_01522	0.27	-0.5
1,596,141	+		MPMX19_01522	0.27	+0.1
1,596,141	+		MPMX19_01522	0.27	+0.5
1,596,141	+		MPMX19_01522	0.27	+1.4
1,596,141	+		MPMX19_01522	0.27	-0.2
1,596,141	+		MPMX19_01522	0.27	-1.7
1,596,141	+		MPMX19_01522	0.27	-0.9
1,596,141	+		MPMX19_01522	0.27	+1.2
1,596,141	+		MPMX19_01522	0.27	+0.8
1,596,141	+		MPMX19_01522	0.27	-1.5
1,596,141	+		MPMX19_01522	0.27	+0.3
1,596,141	+		MPMX19_01522	0.27	-0.8
1,596,141	+		MPMX19_01522	0.27	+0.1
1,596,141	+		MPMX19_01522	0.27	+0.5
1,596,141	+		MPMX19_01522	0.27	-1.5
1,596,141	+		MPMX19_01522	0.27	-0.4
1,596,141	+		MPMX19_01522	0.27	+0.8
1,596,141	+		MPMX19_01522	0.27	-0.7
1,596,141	+		MPMX19_01522	0.27	-0.9
1,596,141	+		MPMX19_01522	0.27	+0.3
1,596,141	+		MPMX19_01522	0.27	-0.1
1,596,141	+		MPMX19_01522	0.27	+0.3
1,596,141	+		MPMX19_01522	0.27	+0.9
1,596,141	+		MPMX19_01522	0.27	-0.5
1,596,141	+		MPMX19_01522	0.27	-0.2
1,596,141	+		MPMX19_01522	0.27	-0.9
1,596,141	+		MPMX19_01522	0.27	-0.5
1,596,141	+		MPMX19_01522	0.27	-0.1
1,596,141	+		MPMX19_01522	0.27	-0.4
1,596,141	+		MPMX19_01522	0.27	+0.3
1,596,142	-		MPMX19_01522	0.27	-0.4
1,596,142	-		MPMX19_01522	0.27	-0.4
1,596,142	-		MPMX19_01522	0.27	+0.1
1,596,142	-		MPMX19_01522	0.27	-1.7
1,596,142	-		MPMX19_01522	0.27	+1.3
1,596,142	-		MPMX19_01522	0.27	-0.7
1,596,142	-		MPMX19_01522	0.27	-0.2
1,596,142	-		MPMX19_01522	0.27	+0.8
1,596,142	-		MPMX19_01522	0.27	+0.3
1,596,142	-		MPMX19_01522	0.27	+0.9
1,596,142	-		MPMX19_01522	0.27	+0.1
1,596,142	-		MPMX19_01522	0.27	-1.2
1,596,142	-		MPMX19_01522	0.27	-0.5
1,596,142	-		MPMX19_01522	0.27	-0.1
1,596,142	-		MPMX19_01522	0.27	-0.2
1,596,142	-		MPMX19_01522	0.27	+1.2
1,596,142	-		MPMX19_01522	0.27	-1.3
1,596,142	-		MPMX19_01522	0.27	-0.6
1,596,142	-		MPMX19_01522	0.27	-0.5
1,596,142	-		MPMX19_01522	0.27	+0.6
1,596,142	-		MPMX19_01522	0.27	-0.5
1,596,142	-		MPMX19_01522	0.27	-0.2
1,596,142	-		MPMX19_01522	0.27	-0.2
1,596,142	-		MPMX19_01522	0.27	-0.8
1,596,142	-		MPMX19_01522	0.27	+0.9
1,596,142	-		MPMX19_01522	0.27	-1.8
1,596,142	-		MPMX19_01522	0.27	+0.6
1,596,142	-		MPMX19_01522	0.27	-0.3
1,596,142	-		MPMX19_01522	0.27	-0.9
1,596,249	+		MPMX19_01522	0.34	-1.0
1,596,249	+		MPMX19_01522	0.34	+1.1
1,596,249	+		MPMX19_01522	0.34	-0.8
1,596,250	-		MPMX19_01522	0.34	-0.8
1,596,250	-		MPMX19_01522	0.34	+0.3
1,596,250	-		MPMX19_01522	0.34	+0.2
1,596,250	-		MPMX19_01522	0.34	-0.4
1,596,250	-		MPMX19_01522	0.34	-0.7
1,596,278	-		MPMX19_01522	0.36	-1.1
1,596,278	-		MPMX19_01522	0.36	-1.2
1,596,278	-		MPMX19_01522	0.36	+0.1
1,596,278	-		MPMX19_01522	0.36	+0.1
1,596,278	-		MPMX19_01522	0.36	-0.3
1,596,309	+		MPMX19_01522	0.39	-1.6
1,596,309	+		MPMX19_01522	0.39	-0.1
1,596,309	+		MPMX19_01522	0.39	+1.1
1,596,310	-		MPMX19_01522	0.39	-0.9
1,596,310	-		MPMX19_01522	0.39	+0.1
1,596,310	-		MPMX19_01522	0.39	+0.7
1,596,310	-		MPMX19_01522	0.39	+0.3
1,596,334	-		MPMX19_01522	0.40	-1.1
1,596,402	+		MPMX19_01522	0.45	-0.2
1,596,402	+		MPMX19_01522	0.45	-0.0
1,596,402	+		MPMX19_01522	0.45	-0.5
1,596,402	+		MPMX19_01522	0.45	-1.4
1,596,402	+		MPMX19_01522	0.45	-0.2
1,596,402	+		MPMX19_01522	0.45	-0.4
1,596,402	+		MPMX19_01522	0.45	-0.8
1,596,402	+		MPMX19_01522	0.45	-0.7
1,596,402	+		MPMX19_01522	0.45	-1.7
1,596,402	+		MPMX19_01522	0.45	-0.8
1,596,403	-		MPMX19_01522	0.45	-0.2
1,596,403	-		MPMX19_01522	0.45	-0.4
1,596,403	-		MPMX19_01522	0.45	-1.5
1,596,403	-		MPMX19_01522	0.45	+0.8
1,596,403	-		MPMX19_01522	0.45	-0.9
1,596,403	-		MPMX19_01522	0.45	-1.5
1,596,403	-		MPMX19_01522	0.45	-0.2
1,596,403	-		MPMX19_01522	0.45	-1.5
1,596,403	-		MPMX19_01522	0.45	+0.7
1,596,403	-		MPMX19_01522	0.45	-0.2
1,596,403	-		MPMX19_01522	0.45	-1.1
1,596,403	-		MPMX19_01522	0.45	-0.3
1,597,090	-				-0.5
1,597,208	+				-0.1
1,597,209	-				-0.7
1,597,209	-				-0.1
1,597,268	+		MPMX19_01523	0.15	+0.7
1,597,268	+		MPMX19_01523	0.15	-0.6
1,597,268	+		MPMX19_01523	0.15	+0.3
1,597,268	+		MPMX19_01523	0.15	-0.3
1,597,268	+		MPMX19_01523	0.15	-0.2
1,597,269	-		MPMX19_01523	0.15	-1.8
1,597,269	-		MPMX19_01523	0.15	-1.4
1,597,269	-		MPMX19_01523	0.15	+0.7
1,597,269	-		MPMX19_01523	0.15	-1.9
1,597,269	-		MPMX19_01523	0.15	-0.7
1,597,269	-		MPMX19_01523	0.15	-1.7
1,597,269	-		MPMX19_01523	0.15	+2.1
1,597,269	-		MPMX19_01523	0.15	-0.2
1,597,269	-		MPMX19_01523	0.15	+0.3
1,597,269	-		MPMX19_01523	0.15	+0.5
1,597,493	+		MPMX19_01523	0.70	-0.5
1,597,493	+		MPMX19_01523	0.70	-0.5
1,597,494	-		MPMX19_01523	0.70	-0.0
1,597,494	-		MPMX19_01523	0.70	-0.4
1,597,494	-		MPMX19_01523	0.70	+1.1
1,597,575	+				+0.9
1,597,575	+				+0.6
1,597,575	+				-1.0
1,597,575	+				+0.8
1,597,575	+				+0.1
1,597,575	+				-1.6
1,597,575	+				+1.5
1,597,575	+				+0.3
1,597,575	+				+1.0
1,597,575	+				+0.1
1,597,575	+				-0.4
1,597,575	+				+0.0
1,597,575	+				-0.7
1,597,575	+				-0.1
1,597,575	+				-0.1
1,597,575	+				+0.1
1,597,576	-				-1.5
1,597,576	-				+1.3
1,597,576	-				+0.8
1,597,576	-				+0.5
1,597,576	-				-0.9
1,597,576	-				-0.1
1,597,576	-				+2.1
1,597,576	-				+1.1
1,597,576	-				-0.1
1,597,576	-				-2.0
1,597,576	-				+0.1
1,597,576	-				-1.6
1,597,576	-				+2.3
1,597,576	-				+1.5
1,597,748	+				+0.1
1,597,748	+				-0.8
1,597,749	-				-0.6
1,597,749	-				+0.5
1,597,749	-				-0.5
1,597,749	-				-0.2
1,597,749	-				-0.3
1,597,749	-				-1.4
1,597,750	+				-0.4
1,597,750	+				-0.9
1,597,750	+				+0.4
1,597,750	+				+0.1
1,597,750	+				+0.4
1,597,750	+				-1.8
1,597,750	+				-0.2
1,597,750	+				+0.3
1,597,750	+				-0.7
1,597,750	+				-0.1
1,597,751	-				-0.2
1,597,751	-				+1.4
1,597,751	-				-1.3
1,597,751	-				-0.1
1,597,751	-				-1.1
1,597,751	-				+0.7
1,597,765	+				-2.2
1,597,766	-				-0.4
1,597,766	-				+1.5
1,597,766	-				-0.5
1,597,779	+				-0.6
1,597,779	+				+0.6
1,597,779	+				-0.6
1,597,780	-				+0.9
1,597,780	-				+0.7
1,597,780	-				-0.5
1,597,780	-				-1.7
1,597,783	+				-0.9
1,597,783	+				-0.5
1,597,783	+				-0.2
1,597,783	+				+0.3
1,597,783	+				+0.1
1,597,783	+				-0.9
1,597,783	+				-1.1
1,597,783	+				-0.5
1,597,783	+				-0.2
1,597,783	+				-1.1
1,597,783	+				-1.7
1,597,783	+				-1.0
1,597,783	+				-1.0
1,597,783	+				-0.1
1,597,783	+				-0.9
1,597,783	+				+0.8
1,597,783	+				-1.0
1,597,783	+				+0.3
1,597,783	+				+0.3
1,597,784	-				+0.2
1,597,784	-				+0.1
1,597,784	-				-1.4
1,597,784	-				-0.6
1,597,784	-				-1.3
1,597,784	-				-2.1
1,597,784	-				-0.5
1,597,784	-				-0.7
1,597,784	-				-1.4
1,597,784	-				-0.7
1,597,784	-				+0.0
1,597,784	-				-1.9
1,597,784	-				+0.5
1,597,784	-				+0.2
1,597,975	+				-0.1
1,597,975	+				+0.8
1,597,975	+				-1.2
1,597,975	+				-0.4
1,597,975	+				-1.6
1,597,975	+				-0.1
1,597,975	+				-0.5
1,597,975	+				-0.3
1,597,975	+				+0.3
1,597,975	+				-0.5
1,597,975	+				-0.5
1,597,975	+				-0.1
1,597,975	+				+1.7
1,597,975	+				-0.8
1,597,975	+				+2.1
1,597,975	+				-0.2
1,597,975	+				-0.6
1,597,975	+				-0.8
1,597,975	+				-0.1
1,597,975	+				-0.5
1,597,975	+				+0.7
1,597,975	+				+2.1
1,597,975	+				-0.8
1,597,975	+				-0.4
1,597,975	+				-0.2
1,597,975	+				-1.4
1,597,975	+				+0.5
1,597,975	+				-0.3
1,597,975	+				-2.2
1,597,975	+				-0.6
1,597,975	+				-0.4
1,597,975	+				-0.1
1,597,975	+				+1.3
1,597,975	+				-2.2
1,597,975	+				-1.8
1,597,975	+				-0.6
1,597,975	+				-0.6
1,597,975	+				+0.1
1,597,975	+				-1.1
1,597,975	+				+0.1
1,597,976	-				+0.7
1,597,976	-				-1.1
1,597,976	-				-0.9
1,597,976	-				-1.1
1,597,976	-				-0.7
1,597,976	-				-1.2
1,597,976	-				-1.6
1,597,976	-				-0.4
1,597,976	-				-0.9
1,597,976	-				+1.1
1,597,976	-				-1.4
1,597,976	-				-0.7
1,597,976	-				-1.1
1,597,976	-				-1.6
1,597,976	-				-0.1
1,597,976	-				-0.2
1,597,976	-				-0.4
1,597,976	-				-0.8
1,597,976	-				-0.5
1,597,976	-				-0.6
1,597,976	-				-0.1
1,597,976	-				-1.0
1,597,976	-				-1.3
1,597,976	-				-0.6
1,597,976	-				+0.5
1,597,976	-				-0.1
1,597,976	-				-0.4
1,597,976	-				-1.5
1,597,976	-				+0.1
1,597,976	-				-0.0
1,597,976	-				-0.8
1,597,976	-				-0.2
1,597,976	-				+0.1
1,597,976	-				-0.8
1,597,976	-				+0.1
1,597,976	-				-0.1
1,597,976	-				-1.0
1,597,976	-				-0.1
1,597,976	-				-0.6
1,597,976	-				-0.4
1,597,976	-				-0.5
1,597,976	-				+0.2
1,597,976	-				-1.4
1,597,976	-				-0.5
1,597,976	-				-0.9
1,597,976	-				+0.7
1,597,976	-				+0.3
1,597,976	-				-0.7
1,597,976	-				-1.1
1,597,976	-				-0.2
1,597,976	-				-2.4
1,597,976	-				-0.1
1,598,029	+		MPMX19_01524	0.16	+1.1
1,598,029	+		MPMX19_01524	0.16	+0.9
1,598,030	-		MPMX19_01524	0.16	-0.3
1,598,030	-		MPMX19_01524	0.16	-1.1