Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01519

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,589,264	+		MPMX19_01517	0.66	-0.1
1,589,265	-		MPMX19_01517	0.66	-1.4
1,589,368	+		MPMX19_01517	0.74	-0.1
1,589,368	+		MPMX19_01517	0.74	-0.3
1,589,368	+		MPMX19_01517	0.74	-0.2
1,589,368	+		MPMX19_01517	0.74	-1.8
1,589,368	+		MPMX19_01517	0.74	-0.4
1,589,368	+		MPMX19_01517	0.74	-0.6
1,589,368	+		MPMX19_01517	0.74	-0.3
1,589,368	+		MPMX19_01517	0.74	-0.3
1,589,369	-		MPMX19_01517	0.74	-0.9
1,589,369	-		MPMX19_01517	0.74	-1.1
1,589,369	-		MPMX19_01517	0.74	-2.5
1,589,369	-		MPMX19_01517	0.74	+1.3
1,589,369	-		MPMX19_01517	0.74	+0.1
1,589,369	-		MPMX19_01517	0.74	-0.1
1,589,369	-		MPMX19_01517	0.74	-0.0
1,589,533	+		MPMX19_01517	0.87	+1.3
1,589,533	+		MPMX19_01517	0.87	-1.5
1,589,533	+		MPMX19_01517	0.87	-1.0
1,589,533	+		MPMX19_01517	0.87	+0.1
1,589,533	+		MPMX19_01517	0.87	-1.3
1,589,533	+		MPMX19_01517	0.87	+0.2
1,589,534	-		MPMX19_01517	0.87	+1.1
1,589,534	-		MPMX19_01517	0.87	+0.2
1,589,534	-		MPMX19_01517	0.87	+0.5
1,589,534	-		MPMX19_01517	0.87	-0.4
1,589,534	-		MPMX19_01517	0.87	-0.7
1,589,534	-		MPMX19_01517	0.87	-1.6
1,589,534	-		MPMX19_01517	0.87	-0.6
1,589,534	-		MPMX19_01517	0.87	+0.6
1,589,534	-		MPMX19_01517	0.87	-1.3
1,589,534	-		MPMX19_01517	0.87	-1.7
1,589,534	-		MPMX19_01517	0.87	+0.3
1,589,534	-		MPMX19_01517	0.87	-0.7
1,589,534	-		MPMX19_01517	0.87	-1.0
1,589,611	+				+0.3
1,589,611	+				+0.6
1,589,611	+				-0.2
1,589,612	-				-0.3
1,589,612	-				-1.2
1,589,612	-				+0.1
1,589,612	-				+1.3
1,589,612	-				-1.5
1,589,612	-				+0.6
1,589,612	-				+1.1
1,589,815	+		MPMX19_01518	0.16	+0.3
1,589,815	+		MPMX19_01518	0.16	+0.1
1,589,815	+		MPMX19_01518	0.16	-0.8
1,589,816	-		MPMX19_01518	0.17	+0.7
1,589,816	-		MPMX19_01518	0.17	+0.4
1,589,816	-		MPMX19_01518	0.17	-1.7
1,589,816	-		MPMX19_01518	0.17	-1.3
1,589,816	-		MPMX19_01518	0.17	+0.8
1,589,816	-		MPMX19_01518	0.17	+1.0
1,590,034	+		MPMX19_01518	0.57	-0.9
1,590,034	+		MPMX19_01518	0.57	-1.7
1,590,034	+		MPMX19_01518	0.57	+0.5
1,590,034	+		MPMX19_01518	0.57	-0.3
1,590,034	+		MPMX19_01518	0.57	-1.6
1,590,035	-		MPMX19_01518	0.57	-1.0
1,590,035	-		MPMX19_01518	0.57	+0.4
1,590,035	-		MPMX19_01518	0.57	-0.4
1,590,094	+		MPMX19_01518	0.68	+0.5
1,590,094	+		MPMX19_01518	0.68	-0.6
1,590,094	+		MPMX19_01518	0.68	+0.7
1,590,094	+		MPMX19_01518	0.68	-0.9
1,590,094	+		MPMX19_01518	0.68	-0.5
1,590,094	+		MPMX19_01518	0.68	-0.5
1,590,094	+		MPMX19_01518	0.68	+1.1
1,590,094	+		MPMX19_01518	0.68	-1.3
1,590,094	+		MPMX19_01518	0.68	-0.4
1,590,094	+		MPMX19_01518	0.68	+1.5
1,590,094	+		MPMX19_01518	0.68	+1.7
1,590,094	+		MPMX19_01518	0.68	+2.5
1,590,095	-		MPMX19_01518	0.69	-0.4
1,590,095	-		MPMX19_01518	0.69	-1.0
1,590,095	-		MPMX19_01518	0.69	+2.1
1,590,095	-		MPMX19_01518	0.69	+0.3
1,590,095	-		MPMX19_01518	0.69	+0.5
1,590,095	-		MPMX19_01518	0.69	-2.0
1,590,095	-		MPMX19_01518	0.69	+0.5
1,590,095	-		MPMX19_01518	0.69	+0.1
1,590,095	-		MPMX19_01518	0.69	-1.4
1,590,095	-		MPMX19_01518	0.69	-0.5
1,590,112	+		MPMX19_01518	0.72	-0.9
1,590,112	+		MPMX19_01518	0.72	-1.3
1,590,112	+		MPMX19_01518	0.72	+0.6
1,590,112	+		MPMX19_01518	0.72	+1.3
1,590,112	+		MPMX19_01518	0.72	-1.6
1,590,113	-		MPMX19_01518	0.72	-1.7
1,590,113	-		MPMX19_01518	0.72	+0.1
1,590,113	-		MPMX19_01518	0.72	+0.3
1,590,113	-		MPMX19_01518	0.72	-0.3
1,590,113	-		MPMX19_01518	0.72	+0.8
1,590,113	-		MPMX19_01518	0.72	-0.4
1,590,214	+				-2.1
1,590,214	+				-0.6
1,590,214	+				-0.3
1,590,214	+				-0.2
1,590,214	+				-0.8
1,590,214	+				+0.3
1,590,214	+				+1.3
1,590,214	+				-1.8
1,590,214	+				-1.1
1,590,215	-				+0.5
1,590,215	-				-2.4
1,590,215	-				+0.7
1,590,297	+				-0.9
1,590,360	+		MPMX19_01519	0.12	+0.6
1,590,360	+		MPMX19_01519	0.12	-1.2
1,590,360	+		MPMX19_01519	0.12	-1.4
1,590,360	+		MPMX19_01519	0.12	-0.7
1,590,360	+		MPMX19_01519	0.12	-1.7
1,590,360	+		MPMX19_01519	0.12	-0.9
1,590,360	+		MPMX19_01519	0.12	-0.1
1,590,360	+		MPMX19_01519	0.12	-0.1
1,590,360	+		MPMX19_01519	0.12	-0.1
1,590,360	+		MPMX19_01519	0.12	+0.1
1,590,361	-		MPMX19_01519	0.13	+0.5
1,590,361	-		MPMX19_01519	0.13	+0.2
1,590,361	-		MPMX19_01519	0.13	-1.7
1,590,361	-		MPMX19_01519	0.13	+0.6
1,590,361	-		MPMX19_01519	0.13	+0.3
1,590,361	-		MPMX19_01519	0.13	-0.3
1,590,361	-		MPMX19_01519	0.13	-1.3
1,590,361	-		MPMX19_01519	0.13	-1.0
1,590,361	-		MPMX19_01519	0.13	+0.3
1,590,361	-		MPMX19_01519	0.13	+0.1
1,590,361	-		MPMX19_01519	0.13	+0.3
1,590,361	-		MPMX19_01519	0.13	+0.9
1,590,366	+		MPMX19_01519	0.13	+0.9
1,590,366	+		MPMX19_01519	0.13	+0.1
1,590,366	+		MPMX19_01519	0.13	-1.0
1,590,367	-		MPMX19_01519	0.13	+0.6
1,590,367	-		MPMX19_01519	0.13	-0.1
1,590,367	-		MPMX19_01519	0.13	-0.5
1,590,367	-		MPMX19_01519	0.13	+0.8
1,590,367	-		MPMX19_01519	0.13	-0.9
1,590,367	-		MPMX19_01519	0.13	-1.3
1,590,367	-		MPMX19_01519	0.13	+0.2
1,590,367	-		MPMX19_01519	0.13	-2.9
1,590,367	-		MPMX19_01519	0.13	+0.3
1,590,367	-		MPMX19_01519	0.13	+0.5
1,590,367	-		MPMX19_01519	0.13	-1.1
1,590,367	-		MPMX19_01519	0.13	+0.5
1,590,399	+		MPMX19_01519	0.17	-0.5
1,590,399	+		MPMX19_01519	0.17	-0.2
1,590,400	-		MPMX19_01519	0.17	+0.7
1,590,400	-		MPMX19_01519	0.17	-0.5
1,590,672	+		MPMX19_01519	0.51	-1.4
1,590,672	+		MPMX19_01519	0.51	-0.4
1,590,672	+		MPMX19_01519	0.51	-0.3
1,590,672	+		MPMX19_01519	0.51	-1.4
1,590,672	+		MPMX19_01519	0.51	+0.1
1,590,672	+		MPMX19_01519	0.51	-0.5
1,590,672	+		MPMX19_01519	0.51	-0.8
1,590,672	+		MPMX19_01519	0.51	+1.1
1,590,672	+		MPMX19_01519	0.51	-0.0
1,590,673	-		MPMX19_01519	0.51	+0.8
1,590,673	-		MPMX19_01519	0.51	-1.1
1,590,673	-		MPMX19_01519	0.51	-0.7
1,590,673	-		MPMX19_01519	0.51	+0.1
1,590,673	-		MPMX19_01519	0.51	-0.3
1,590,673	-		MPMX19_01519	0.51	+0.3
1,590,673	-		MPMX19_01519	0.51	-0.3
1,590,673	-		MPMX19_01519	0.51	-0.2
1,590,673	-		MPMX19_01519	0.51	-0.2
1,590,804	+		MPMX19_01519	0.67	-2.6
1,590,804	+		MPMX19_01519	0.67	-0.3
1,590,804	+		MPMX19_01519	0.67	-0.0
1,590,804	+		MPMX19_01519	0.67	-0.6
1,590,804	+		MPMX19_01519	0.67	-0.0
1,590,805	-		MPMX19_01519	0.68	+0.2
1,590,805	-		MPMX19_01519	0.68	-0.1
1,590,805	-		MPMX19_01519	0.68	-0.2
1,590,805	-		MPMX19_01519	0.68	-1.1
1,590,805	-		MPMX19_01519	0.68	-0.4
1,591,114	+				+0.1
1,591,114	+				+0.1
1,591,115	-				-1.0
1,591,115	-				+0.1
1,591,197	-				-0.1
1,591,255	+				+1.5
1,591,256	-				-0.1
1,591,268	+				-1.6
1,591,290	+				-2.5
1,591,290	+				-0.1
1,591,290	+				-1.6
1,591,290	+				-1.1
1,591,290	+				-1.3
1,591,290	+				-1.1
1,591,291	-				-0.8
1,591,291	-				+0.3
1,591,291	-				+0.1
1,591,291	-				-1.0
1,591,291	-				+0.1
1,591,291	-				-0.5
1,591,291	-				+1.1
1,591,317	+				+1.8
1,591,317	+				+0.1
1,591,317	+				-0.7
1,591,317	+				-1.3
1,591,317	+				-0.2
1,591,318	-				-0.9
1,591,318	-				-0.6
1,591,318	-				+0.1
1,591,318	-				-0.5
1,591,318	-				+1.1
1,591,444	+				+0.1
1,591,444	+				-0.3
1,591,444	+				-0.3
1,591,444	+				-0.1
1,591,444	+				+1.1
1,591,444	+				+0.1
1,591,444	+				+0.3
1,591,444	+				-0.9
1,591,444	+				-1.3
1,591,444	+				+1.1
1,591,444	+				+0.1
1,591,444	+				-0.9
1,591,444	+				-0.5
1,591,444	+				-0.9
1,591,444	+				+0.0
1,591,444	+				-1.3
1,591,444	+				-0.7
1,591,445	-				+0.2
1,591,445	-				+1.4
1,591,445	-				-0.5
1,591,445	-				+0.4
1,591,445	-				+0.3
1,591,445	-				+1.3
1,591,445	-				+1.1
1,591,445	-				-0.1
1,591,445	-				+0.5
1,591,445	-				+0.5
1,591,445	-				+1.5
1,591,445	-				-1.4
1,591,445	-				-0.8
1,591,445	-				-0.5
1,591,445	-				-1.9
1,591,445	-				-1.4
1,591,446	+				+0.1
1,591,446	+				+0.7
1,591,446	+				+0.1
1,591,446	+				+0.7
1,591,446	+				+0.3
1,591,446	+				+0.6
1,591,446	+				+1.1
1,591,447	-				-1.2
1,591,447	-				-2.1
1,591,447	-				-1.1
1,591,447	-				+2.1
1,591,447	-				+0.9
1,591,447	-				+1.1
1,591,479	+				+1.1
1,591,480	-				-1.8
1,591,530	+				+0.8
1,591,530	+				+0.3
1,591,530	+				-1.6
1,591,531	-				-0.0
1,591,671	+		MPMX19_01520	0.11	+0.3
1,591,671	+		MPMX19_01520	0.11	+0.3
1,591,671	+		MPMX19_01520	0.11	+1.5
1,591,671	+		MPMX19_01520	0.11	+0.9
1,591,671	+		MPMX19_01520	0.11	-0.5
1,591,672	-		MPMX19_01520	0.11	+0.6
1,591,672	-		MPMX19_01520	0.11	-0.7
1,591,672	-		MPMX19_01520	0.11	+0.8
1,591,672	-		MPMX19_01520	0.11	+0.9
1,591,672	-		MPMX19_01520	0.11	-0.9
1,591,672	-		MPMX19_01520	0.11	+0.1
1,591,672	-		MPMX19_01520	0.11	-0.4
1,591,672	-		MPMX19_01520	0.11	-0.5
1,591,672	-		MPMX19_01520	0.11	+1.1
1,591,672	-		MPMX19_01520	0.11	-0.4
1,591,672	-		MPMX19_01520	0.11	-0.5
1,591,980	+		MPMX19_01520	0.20	-0.9
1,591,980	+		MPMX19_01520	0.20	-0.4
1,591,980	+		MPMX19_01520	0.20	-0.9
1,591,980	+		MPMX19_01520	0.20	+0.3
1,591,981	-		MPMX19_01520	0.20	+0.0
1,591,981	-		MPMX19_01520	0.20	-1.1
1,591,981	-		MPMX19_01520	0.20	+0.3
1,591,981	-		MPMX19_01520	0.20	-0.7
1,591,981	-		MPMX19_01520	0.20	+0.1