Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01493

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,563,971	+		MPMX19_01491	0.84	-1.4
1,563,971	+		MPMX19_01491	0.84	-0.5
1,563,972	-		MPMX19_01491	0.85	+0.7
1,564,379	+		MPMX19_01492	0.29	-0.2
1,564,379	+		MPMX19_01492	0.29	-0.9
1,564,379	+		MPMX19_01492	0.29	-1.0
1,564,379	+		MPMX19_01492	0.29	-0.2
1,564,380	-		MPMX19_01492	0.29	+1.6
1,564,380	-		MPMX19_01492	0.29	-0.5
1,564,380	-		MPMX19_01492	0.29	-0.7
1,564,380	-		MPMX19_01492	0.29	-1.7
1,564,380	-		MPMX19_01492	0.29	-0.5
1,564,385	+		MPMX19_01492	0.30	-0.3
1,564,385	+		MPMX19_01492	0.30	-0.5
1,564,385	+		MPMX19_01492	0.30	-0.9
1,564,385	+		MPMX19_01492	0.30	+0.6
1,564,386	-		MPMX19_01492	0.30	-1.1
1,564,386	-		MPMX19_01492	0.30	-0.5
1,564,386	-		MPMX19_01492	0.30	-2.7
1,564,386	-		MPMX19_01492	0.30	+0.2
1,564,386	-		MPMX19_01492	0.30	+0.5
1,564,601	+		MPMX19_01492	0.82	-1.8
1,564,601	+		MPMX19_01492	0.82	-1.1
1,564,602	-		MPMX19_01492	0.82	-1.9
1,564,602	-		MPMX19_01492	0.82	+0.1
1,564,602	-		MPMX19_01492	0.82	+0.0
1,564,602	-		MPMX19_01492	0.82	-1.1
1,564,602	-		MPMX19_01492	0.82	-1.2
1,564,649	+				-0.6
1,564,649	+				-0.4
1,564,649	+				-0.3
1,564,649	+				-0.7
1,564,649	+				+0.0
1,564,649	+				-0.4
1,564,650	-				-0.1
1,564,650	-				-0.5
1,564,650	-				-0.4
1,564,650	-				-1.9
1,564,650	-				+0.5
1,564,650	-				-2.9
1,564,650	-				-1.7
1,564,650	-				-2.0
1,564,650	-				+0.0
1,564,722	+				-1.0
1,564,722	+				-0.3
1,564,722	+				-0.4
1,564,722	+				-1.3
1,564,722	+				-0.8
1,564,722	+				-0.7
1,564,722	+				+0.3
1,564,723	-				-0.4
1,564,723	-				-0.3
1,564,723	-				-0.3
1,564,723	-				-1.7
1,564,723	-				+0.2
1,564,724	+				-1.7
1,564,724	+				+0.5
1,564,724	+				+0.8
1,564,724	+				-0.7
1,564,724	+				-1.1
1,564,724	+				-0.5
1,564,724	+				-0.3
1,564,724	+				-1.5
1,564,724	+				+1.3
1,564,724	+				-0.3
1,564,725	-				+1.0
1,564,725	-				-1.1
1,564,725	-				+0.3
1,564,725	-				-0.0
1,564,725	-				-0.4
1,564,725	-				-1.5
1,564,725	-				+0.2
1,564,725	-				+0.2
1,564,725	-				-0.5
1,564,725	-				-1.0
1,564,725	-				-0.5
1,564,725	-				-0.8
1,564,725	-				-1.0
1,564,725	-				-0.7
1,564,725	-				-1.7
1,564,725	-				-1.0
1,564,725	-				-1.7
1,564,725	-				+0.2
1,564,934	+				+0.4
1,564,934	+				-1.2
1,564,934	+				+0.5
1,564,934	+				-0.6
1,564,935	-				-1.0
1,564,935	-				+0.7
1,564,935	-				+0.1
1,564,935	-				+0.9
1,564,935	-				-0.5
1,564,935	-				-0.5
1,564,935	-				+0.7
1,565,092	+		MPMX19_01493	0.33	-0.1
1,565,092	+		MPMX19_01493	0.33	+1.0
1,565,093	-		MPMX19_01493	0.33	+0.0
1,565,093	-		MPMX19_01493	0.33	-0.0
1,565,093	-		MPMX19_01493	0.33	+1.5
1,565,093	-		MPMX19_01493	0.33	-0.9
1,565,351	+				-1.0
1,565,351	+				-0.5
1,565,351	+				-2.0
1,565,351	+				-2.3
1,565,351	+				-0.5
1,565,351	+				-0.6
1,565,351	+				-1.2
1,565,351	+				-1.9
1,565,352	-				-0.3
1,565,352	-				+0.6
1,565,352	-				-0.0
1,565,352	-				-0.3
1,565,352	-				-1.1
1,565,352	-				-1.4
1,565,352	-				-0.3
1,565,352	-				-1.0
1,565,352	-				-0.4
1,565,352	-				-1.1
1,565,352	-				-0.4
1,565,410	+				-0.7
1,565,410	+				+0.6
1,565,425	+				-0.4
1,565,425	+				-1.1
1,565,425	+				-0.3
1,565,425	+				+0.1
1,565,425	+				-0.7
1,565,425	+				-2.0
1,565,425	+				-0.8
1,565,425	+				-0.5
1,565,425	+				-0.5
1,565,425	+				-0.9
1,565,425	+				-1.9
1,565,425	+				-0.6
1,565,425	+				-1.3
1,565,425	+				-0.6
1,565,425	+				-0.3
1,565,425	+				-0.4
1,565,425	+				-1.6
1,565,425	+				-2.1
1,565,425	+				-0.3
1,565,425	+				-1.2
1,565,425	+				-0.5
1,565,426	-				-0.5
1,565,426	-				-0.8
1,565,426	-				+0.2
1,565,426	-				-1.1
1,565,426	-				-0.9
1,565,426	-				-0.1
1,565,426	-				+0.1
1,565,426	-				-1.1
1,565,426	-				-0.3
1,565,426	-				+0.1
1,565,426	-				-0.3
1,565,426	-				-0.3
1,565,426	-				-0.3
1,565,426	-				-0.5
1,565,426	-				-0.1
1,565,426	-				-0.7
1,565,440	+				+0.1
1,565,440	+				+0.1
1,565,440	+				-0.2
1,565,440	+				-0.5
1,565,440	+				-0.2
1,565,440	+				-0.8
1,565,440	+				-1.3
1,565,440	+				-2.3
1,565,440	+				-1.8
1,565,441	-				-1.3
1,565,441	-				-1.3
1,565,441	-				-0.8
1,565,441	-				+0.1
1,565,441	-				-0.9
1,565,441	-				+0.3
1,565,441	-				-0.0
1,565,441	-				-0.8
1,565,507	+				-0.8
1,565,508	-				+1.2
1,565,508	-				+0.7
1,565,508	-				-0.3
1,565,549	+				-0.9
1,565,549	+				-0.5
1,565,549	+				-1.6
1,565,549	+				-0.4
1,565,550	-				-0.1
1,565,550	-				-0.5
1,565,550	-				-1.9
1,565,572	+				-2.9
1,565,572	+				-0.5
1,565,572	+				-0.4
1,565,572	+				-0.8
1,565,572	+				-0.4
1,565,572	+				-2.4
1,565,572	+				-0.6
1,565,572	+				+0.8
1,565,572	+				-1.8
1,565,572	+				-0.3
1,565,572	+				+0.4
1,565,572	+				+0.1
1,565,572	+				-1.1
1,565,572	+				-0.2
1,565,572	+				-1.6
1,565,573	-				-0.9
1,565,573	-				-2.2
1,565,573	-				+0.1
1,565,573	-				-1.6
1,565,573	-				-0.4
1,565,574	+				-0.6
1,565,574	+				-0.4
1,565,574	+				+1.1
1,565,574	+				+1.1
1,565,574	+				-0.4
1,565,575	-				-1.8
1,565,575	-				-1.3
1,565,575	-				-0.1
1,565,575	-				-1.1
1,565,718	+				-0.1
1,565,718	+				-1.6
1,565,718	+				-1.3
1,565,719	-				+0.0
1,565,719	-				-2.3
1,565,938	+		MPMX19_01494	0.29	-0.9
1,565,938	+		MPMX19_01494	0.29	-0.5
1,565,938	+		MPMX19_01494	0.29	+0.3
1,565,938	+		MPMX19_01494	0.29	-0.8
1,565,939	-		MPMX19_01494	0.29	-1.1
1,565,939	-		MPMX19_01494	0.29	+0.4
1,566,052	+		MPMX19_01494	0.39	-0.9
1,566,052	+		MPMX19_01494	0.39	+0.5
1,566,052	+		MPMX19_01494	0.39	-2.0
1,566,052	+		MPMX19_01494	0.39	-0.5
1,566,052	+		MPMX19_01494	0.39	-1.6
1,566,052	+		MPMX19_01494	0.39	-0.9
1,566,052	+		MPMX19_01494	0.39	-2.3
1,566,052	+		MPMX19_01494	0.39	-1.1
1,566,052	+		MPMX19_01494	0.39	-1.6
1,566,052	+		MPMX19_01494	0.39	-0.5
1,566,052	+		MPMX19_01494	0.39	-1.1
1,566,052	+		MPMX19_01494	0.39	-2.5
1,566,052	+		MPMX19_01494	0.39	-2.6
1,566,052	+		MPMX19_01494	0.39	-0.2
1,566,052	+		MPMX19_01494	0.39	-2.4
1,566,052	+		MPMX19_01494	0.39	-0.9
1,566,052	+		MPMX19_01494	0.39	-0.7
1,566,052	+		MPMX19_01494	0.39	-1.7
1,566,053	-		MPMX19_01494	0.39	-0.9
1,566,053	-		MPMX19_01494	0.39	-2.1
1,566,053	-		MPMX19_01494	0.39	-1.1
1,566,053	-		MPMX19_01494	0.39	-0.2
1,566,053	-		MPMX19_01494	0.39	+0.1
1,566,053	-		MPMX19_01494	0.39	-1.5
1,566,053	-		MPMX19_01494	0.39	-1.6
1,566,053	-		MPMX19_01494	0.39	-2.3
1,566,053	-		MPMX19_01494	0.39	-1.9
1,566,053	-		MPMX19_01494	0.39	+2.1
1,566,053	-		MPMX19_01494	0.39	-1.3
1,566,053	-		MPMX19_01494	0.39	-1.3
1,566,053	-		MPMX19_01494	0.39	-2.0
1,566,053	-		MPMX19_01494	0.39	-1.1
1,566,053	-		MPMX19_01494	0.39	-0.5
1,566,053	-		MPMX19_01494	0.39	-0.2
1,566,053	-		MPMX19_01494	0.39	+0.7
1,566,053	-		MPMX19_01494	0.39	+0.1
1,566,053	-		MPMX19_01494	0.39	-1.4
1,566,053	-		MPMX19_01494	0.39	-1.4
1,566,053	-		MPMX19_01494	0.39	-1.8