Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01451

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,519,775	+		MPMX19_01448	0.45	-2.5
1,519,775	+		MPMX19_01448	0.45	+0.2
1,519,775	+		MPMX19_01448	0.45	+0.2
1,519,775	+		MPMX19_01448	0.45	-0.8
1,519,776	-		MPMX19_01448	0.46	+0.3
1,519,776	-		MPMX19_01448	0.46	+0.3
1,519,776	-		MPMX19_01448	0.46	-0.5
1,519,776	-		MPMX19_01448	0.46	-2.0
1,519,776	-		MPMX19_01448	0.46	-0.8
1,519,796	+		MPMX19_01448	0.56	+0.2
1,519,797	-		MPMX19_01448	0.57	+1.2
1,520,197	+				-0.5
1,520,197	+				-0.8
1,520,197	+				-1.3
1,520,197	+				-1.9
1,520,197	+				-0.6
1,520,197	+				-0.8
1,520,198	-				+0.3
1,520,198	-				-1.8
1,520,245	+				-1.9
1,520,245	+				+0.2
1,520,245	+				+0.0
1,520,245	+				-0.3
1,520,246	-				-1.4
1,520,246	-				-1.1
1,520,246	-				-1.7
1,520,246	-				+0.3
1,520,246	-				+0.2
1,520,306	+				-0.6
1,520,306	+				+0.0
1,520,306	+				-0.9
1,520,363	-		MPMX19_01450	0.11	-0.5
1,520,535	+		MPMX19_01450	0.53	+0.1
1,520,535	+		MPMX19_01450	0.53	-0.4
1,520,535	+		MPMX19_01450	0.53	-0.4
1,520,535	+		MPMX19_01450	0.53	-1.0
1,520,535	+		MPMX19_01450	0.53	+0.5
1,520,535	+		MPMX19_01450	0.53	+0.2
1,520,535	+		MPMX19_01450	0.53	-0.4
1,520,535	+		MPMX19_01450	0.53	-1.4
1,520,535	+		MPMX19_01450	0.53	+2.0
1,520,535	+		MPMX19_01450	0.53	-1.5
1,520,535	+		MPMX19_01450	0.53	-1.6
1,520,535	+		MPMX19_01450	0.53	-0.3
1,520,535	+		MPMX19_01450	0.53	-1.1
1,520,536	-		MPMX19_01450	0.53	-0.3
1,520,536	-		MPMX19_01450	0.53	-1.0
1,520,536	-		MPMX19_01450	0.53	-0.2
1,520,536	-		MPMX19_01450	0.53	-0.7
1,520,536	-		MPMX19_01450	0.53	+0.2
1,520,536	-		MPMX19_01450	0.53	+0.5
1,520,536	-		MPMX19_01450	0.53	-0.8
1,520,536	-		MPMX19_01450	0.53	-1.1
1,520,536	-		MPMX19_01450	0.53	-1.7
1,520,536	-		MPMX19_01450	0.53	-0.2
1,520,536	-		MPMX19_01450	0.53	+0.0
1,520,610	+		MPMX19_01450	0.71	-1.7
1,520,610	+		MPMX19_01450	0.71	+0.2
1,520,611	-		MPMX19_01450	0.72	+0.2
1,520,611	-		MPMX19_01450	0.72	-0.4
1,520,611	-		MPMX19_01450	0.72	-0.7
1,520,744	-				-0.2
1,520,821	+				-0.2
1,520,821	+				-0.1
1,520,821	+				-0.5
1,520,822	-				+1.5
1,520,822	-				-0.8
1,520,822	-				+0.7
1,520,822	-				-0.5
1,520,822	-				+0.0
1,520,822	-				-1.8
1,520,822	-				-2.1
1,520,980	+		MPMX19_01451	0.13	+0.2
1,520,980	+		MPMX19_01451	0.13	-1.5
1,520,980	+		MPMX19_01451	0.13	-0.0
1,520,980	+		MPMX19_01451	0.13	-0.9
1,520,980	+		MPMX19_01451	0.13	-0.4
1,520,981	-		MPMX19_01451	0.13	+0.0
1,520,981	-		MPMX19_01451	0.13	-1.5
1,520,981	-		MPMX19_01451	0.13	-0.9
1,520,981	-		MPMX19_01451	0.13	-0.8
1,520,981	-		MPMX19_01451	0.13	+0.5
1,520,981	-		MPMX19_01451	0.13	-1.0
1,520,981	-		MPMX19_01451	0.13	-1.4
1,520,981	-		MPMX19_01451	0.13	+0.2
1,520,981	-		MPMX19_01451	0.13	+0.2
1,520,981	-		MPMX19_01451	0.13	-1.2
1,520,981	-		MPMX19_01451	0.13	+0.9
1,521,259	+		MPMX19_01451	0.27	-0.4
1,521,260	-		MPMX19_01451	0.27	-0.3
1,521,296	+		MPMX19_01451	0.29	-0.5
1,521,297	-		MPMX19_01451	0.29	-1.5
1,521,439	+		MPMX19_01451	0.37	-0.3
1,521,439	+		MPMX19_01451	0.37	+0.7
1,521,440	-		MPMX19_01451	0.37	-0.7
1,521,440	-		MPMX19_01451	0.37	-0.1
1,521,440	-		MPMX19_01451	0.37	-0.8
1,521,440	-		MPMX19_01451	0.37	-1.6
1,521,580	+		MPMX19_01451	0.44	-1.1
1,521,580	+		MPMX19_01451	0.44	+0.1
1,521,580	+		MPMX19_01451	0.44	-1.3
1,521,580	+		MPMX19_01451	0.44	-0.6
1,521,580	+		MPMX19_01451	0.44	-0.3
1,521,580	+		MPMX19_01451	0.44	+0.5
1,521,580	+		MPMX19_01451	0.44	-1.9
1,521,581	-		MPMX19_01451	0.44	-0.7
1,521,581	-		MPMX19_01451	0.44	-2.1
1,521,754	+		MPMX19_01451	0.54	-1.0
1,521,754	+		MPMX19_01451	0.54	-0.3
1,521,754	+		MPMX19_01451	0.54	-0.4
1,521,754	+		MPMX19_01451	0.54	-1.3
1,521,754	+		MPMX19_01451	0.54	+0.8
1,521,754	+		MPMX19_01451	0.54	-1.4
1,521,754	+		MPMX19_01451	0.54	+1.3
1,521,754	+		MPMX19_01451	0.54	-0.9
1,521,755	-		MPMX19_01451	0.54	-0.4
1,521,755	-		MPMX19_01451	0.54	+0.5
1,521,755	-		MPMX19_01451	0.54	+0.9
1,521,755	-		MPMX19_01451	0.54	+0.5
1,521,755	-		MPMX19_01451	0.54	-0.3
1,521,755	-		MPMX19_01451	0.54	-1.2
1,521,755	-		MPMX19_01451	0.54	+1.0
1,522,270	+		MPMX19_01451	0.81	-0.5
1,522,271	-		MPMX19_01451	0.81	-1.1
1,522,271	-		MPMX19_01451	0.81	-0.5
1,522,364	+		MPMX19_01451	0.86	-1.4
1,522,364	+		MPMX19_01451	0.86	-2.6
1,522,365	-		MPMX19_01451	0.86	-0.5
1,522,365	-		MPMX19_01451	0.86	+0.0
1,522,365	-		MPMX19_01451	0.86	-1.4
1,522,365	-		MPMX19_01451	0.86	-0.5
1,522,531	+				+0.6
1,522,531	+				-0.6
1,522,531	+				-1.4
1,522,531	+				+0.0
1,522,531	+				+1.7
1,522,531	+				-0.4
1,522,531	+				+1.7
1,522,531	+				-0.3
1,522,531	+				-0.4
1,522,531	+				-0.2
1,522,531	+				+0.1
1,522,531	+				+0.0
1,522,531	+				-1.6
1,522,531	+				-1.0
1,522,531	+				-0.7
1,522,531	+				-1.3
1,522,532	-				+0.5
1,522,532	-				-0.4
1,522,532	-				-0.4
1,522,532	-				-1.2
1,522,532	-				-1.0
1,522,532	-				-3.0
1,522,532	-				-1.4
1,522,532	-				-0.8
1,522,532	-				-0.7
1,522,532	-				-0.1
1,522,532	-				+0.9
1,522,532	-				+0.6
1,522,532	-				-1.0
1,522,532	-				+0.1
1,522,532	-				-0.9
1,522,532	-				-0.9
1,522,532	-				-0.5
1,522,667	-				+0.0
1,522,667	-				+0.0
1,522,667	-				-0.5
1,522,667	-				+1.0
1,522,667	-				-0.2
1,522,667	-				-0.1
1,522,667	-				-0.6
1,522,667	-				-0.6
1,522,753	-				-0.8
1,522,753	-				-0.7
1,522,753	-				+0.5
1,522,957	-		MPMX19_01452	0.12	-0.3
1,522,957	-		MPMX19_01452	0.12	-0.3
1,523,070	+		MPMX19_01452	0.17	+3.0
1,523,070	+		MPMX19_01452	0.17	-0.4
1,523,070	+		MPMX19_01452	0.17	-1.3
1,523,070	+		MPMX19_01452	0.17	+0.3
1,523,070	+		MPMX19_01452	0.17	+1.0
1,523,070	+		MPMX19_01452	0.17	+2.0
1,523,070	+		MPMX19_01452	0.17	-0.1
1,523,070	+		MPMX19_01452	0.17	-1.5
1,523,071	-		MPMX19_01452	0.17	+0.5
1,523,071	-		MPMX19_01452	0.17	-2.3
1,523,071	-		MPMX19_01452	0.17	-1.2
1,523,071	-		MPMX19_01452	0.17	+1.0
1,523,071	-		MPMX19_01452	0.17	-0.9
1,523,071	-		MPMX19_01452	0.17	-0.5
1,523,071	-		MPMX19_01452	0.17	-0.9
1,523,071	-		MPMX19_01452	0.17	-0.4
1,523,071	-		MPMX19_01452	0.17	-0.1
1,523,071	-		MPMX19_01452	0.17	+0.5
1,523,071	-		MPMX19_01452	0.17	+0.5
1,523,145	+		MPMX19_01452	0.20	+0.1
1,523,145	+		MPMX19_01452	0.20	-1.0
1,523,145	+		MPMX19_01452	0.20	-0.0
1,523,145	+		MPMX19_01452	0.20	-0.1
1,523,145	+		MPMX19_01452	0.20	-0.8
1,523,145	+		MPMX19_01452	0.20	+1.0
1,523,145	+		MPMX19_01452	0.20	-0.6
1,523,145	+		MPMX19_01452	0.20	-0.8
1,523,145	+		MPMX19_01452	0.20	-1.9
1,523,145	+		MPMX19_01452	0.20	+0.3
1,523,146	-		MPMX19_01452	0.20	+0.0
1,523,146	-		MPMX19_01452	0.20	-0.1
1,523,146	-		MPMX19_01452	0.20	-0.1
1,523,146	-		MPMX19_01452	0.20	+1.0
1,523,146	-		MPMX19_01452	0.20	+0.5
1,523,146	-		MPMX19_01452	0.20	+0.5
1,523,146	-		MPMX19_01452	0.20	-1.0
1,523,146	-		MPMX19_01452	0.20	+1.0
1,523,146	-		MPMX19_01452	0.20	-0.7
1,523,271	+		MPMX19_01452	0.25	-0.5
1,523,271	+		MPMX19_01452	0.25	-0.1
1,523,271	+		MPMX19_01452	0.25	+1.0
1,523,271	+		MPMX19_01452	0.25	+0.5
1,523,271	+		MPMX19_01452	0.25	-0.9
1,523,272	-		MPMX19_01452	0.25	+0.2
1,523,272	-		MPMX19_01452	0.25	-0.5