Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01329

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,383,088	-		MPMX19_01328	0.27	-0.9
1,383,175	+		MPMX19_01328	0.36	-0.3
1,383,175	+		MPMX19_01328	0.36	-1.6
1,383,175	+		MPMX19_01328	0.36	-1.8
1,383,175	+		MPMX19_01328	0.36	-0.0
1,383,175	+		MPMX19_01328	0.36	-1.2
1,383,175	+		MPMX19_01328	0.36	-1.3
1,383,176	-		MPMX19_01328	0.36	-1.3
1,383,176	-		MPMX19_01328	0.36	-0.5
1,383,193	+		MPMX19_01328	0.38	+0.4
1,383,193	+		MPMX19_01328	0.38	-1.1
1,383,193	+		MPMX19_01328	0.38	-0.8
1,383,193	+		MPMX19_01328	0.38	-0.5
1,383,193	+		MPMX19_01328	0.38	-0.9
1,383,193	+		MPMX19_01328	0.38	-1.5
1,383,193	+		MPMX19_01328	0.38	-0.5
1,383,193	+		MPMX19_01328	0.38	-0.8
1,383,193	+		MPMX19_01328	0.38	-0.6
1,383,193	+		MPMX19_01328	0.38	+0.2
1,383,193	+		MPMX19_01328	0.38	-0.2
1,383,193	+		MPMX19_01328	0.38	+0.3
1,383,193	+		MPMX19_01328	0.38	-0.6
1,383,193	+		MPMX19_01328	0.38	-0.5
1,383,193	+		MPMX19_01328	0.38	-0.7
1,383,193	+		MPMX19_01328	0.38	-0.3
1,383,193	+		MPMX19_01328	0.38	-0.8
1,383,193	+		MPMX19_01328	0.38	-1.7
1,383,193	+		MPMX19_01328	0.38	-1.6
1,383,193	+		MPMX19_01328	0.38	-1.0
1,383,193	+		MPMX19_01328	0.38	-0.6
1,383,193	+		MPMX19_01328	0.38	-0.6
1,383,193	+		MPMX19_01328	0.38	+0.2
1,383,193	+		MPMX19_01328	0.38	-0.8
1,383,193	+		MPMX19_01328	0.38	+0.3
1,383,193	+		MPMX19_01328	0.38	-0.0
1,383,193	+		MPMX19_01328	0.38	+0.5
1,383,193	+		MPMX19_01328	0.38	+0.4
1,383,193	+		MPMX19_01328	0.38	-0.3
1,383,193	+		MPMX19_01328	0.38	-0.2
1,383,193	+		MPMX19_01328	0.38	-0.6
1,383,193	+		MPMX19_01328	0.38	-0.2
1,383,194	-		MPMX19_01328	0.38	-0.9
1,383,194	-		MPMX19_01328	0.38	-1.6
1,383,194	-		MPMX19_01328	0.38	-1.3
1,383,194	-		MPMX19_01328	0.38	-0.7
1,383,194	-		MPMX19_01328	0.38	-1.3
1,383,194	-		MPMX19_01328	0.38	-0.8
1,383,194	-		MPMX19_01328	0.38	-1.0
1,383,194	-		MPMX19_01328	0.38	-0.6
1,383,194	-		MPMX19_01328	0.38	-0.6
1,383,194	-		MPMX19_01328	0.38	+0.2
1,383,194	-		MPMX19_01328	0.38	-0.5
1,383,194	-		MPMX19_01328	0.38	-1.0
1,383,194	-		MPMX19_01328	0.38	-1.7
1,383,194	-		MPMX19_01328	0.38	-0.0
1,383,194	-		MPMX19_01328	0.38	-1.0
1,383,194	-		MPMX19_01328	0.38	+0.8
1,383,194	-		MPMX19_01328	0.38	-0.1
1,383,194	-		MPMX19_01328	0.38	+0.2
1,383,194	-		MPMX19_01328	0.38	-0.3
1,383,194	-		MPMX19_01328	0.38	-0.0
1,383,194	-		MPMX19_01328	0.38	-0.3
1,383,194	-		MPMX19_01328	0.38	-0.4
1,383,194	-		MPMX19_01328	0.38	-1.0
1,383,194	-		MPMX19_01328	0.38	-0.1
1,383,194	-		MPMX19_01328	0.38	-0.7
1,383,194	-		MPMX19_01328	0.38	-0.7
1,383,194	-		MPMX19_01328	0.38	+0.7
1,383,194	-		MPMX19_01328	0.38	-0.7
1,383,194	-		MPMX19_01328	0.38	-1.3
1,383,202	+		MPMX19_01328	0.39	-1.0
1,383,203	-		MPMX19_01328	0.39	-0.8
1,383,203	-		MPMX19_01328	0.39	-1.1
1,383,203	-		MPMX19_01328	0.39	-0.8
1,383,469	+		MPMX19_01328	0.65	-1.1
1,383,469	+		MPMX19_01328	0.65	-1.2
1,383,469	+		MPMX19_01328	0.65	-0.3
1,383,469	+		MPMX19_01328	0.65	+0.6
1,383,469	+		MPMX19_01328	0.65	+1.8
1,383,469	+		MPMX19_01328	0.65	+0.6
1,383,469	+		MPMX19_01328	0.65	-0.6
1,383,469	+		MPMX19_01328	0.65	-1.1
1,383,469	+		MPMX19_01328	0.65	-1.3
1,383,469	+		MPMX19_01328	0.65	-0.9
1,383,469	+		MPMX19_01328	0.65	-1.0
1,383,469	+		MPMX19_01328	0.65	-0.3
1,383,469	+		MPMX19_01328	0.65	-1.9
1,383,469	+		MPMX19_01328	0.65	-1.5
1,383,469	+		MPMX19_01328	0.65	+0.8
1,383,469	+		MPMX19_01328	0.65	+0.2
1,383,470	-		MPMX19_01328	0.65	-0.2
1,383,470	-		MPMX19_01328	0.65	-0.6
1,383,470	-		MPMX19_01328	0.65	-0.1
1,383,470	-		MPMX19_01328	0.65	+0.3
1,383,470	-		MPMX19_01328	0.65	-1.2
1,383,470	-		MPMX19_01328	0.65	-1.3
1,383,470	-		MPMX19_01328	0.65	+0.4
1,383,470	-		MPMX19_01328	0.65	-0.3
1,383,470	-		MPMX19_01328	0.65	-0.3
1,383,470	-		MPMX19_01328	0.65	-1.2
1,383,470	-		MPMX19_01328	0.65	-1.7
1,383,472	+		MPMX19_01328	0.66	-1.1
1,383,472	+		MPMX19_01328	0.66	-0.2
1,383,472	+		MPMX19_01328	0.66	+0.1
1,383,472	+		MPMX19_01328	0.66	-1.6
1,383,472	+		MPMX19_01328	0.66	-0.9
1,383,472	+		MPMX19_01328	0.66	-1.0
1,383,472	+		MPMX19_01328	0.66	-0.9
1,383,472	+		MPMX19_01328	0.66	+1.2
1,383,472	+		MPMX19_01328	0.66	+0.4
1,383,472	+		MPMX19_01328	0.66	-1.8
1,383,472	+		MPMX19_01328	0.66	-1.2
1,383,472	+		MPMX19_01328	0.66	+0.4
1,383,472	+		MPMX19_01328	0.66	+1.2
1,383,472	+		MPMX19_01328	0.66	-1.2
1,383,472	+		MPMX19_01328	0.66	-0.2
1,383,472	+		MPMX19_01328	0.66	-2.1
1,383,472	+		MPMX19_01328	0.66	+1.6
1,383,472	+		MPMX19_01328	0.66	+0.2
1,383,472	+		MPMX19_01328	0.66	-0.2
1,383,472	+		MPMX19_01328	0.66	-0.6
1,383,472	+		MPMX19_01328	0.66	-0.8
1,383,472	+		MPMX19_01328	0.66	-1.0
1,383,472	+		MPMX19_01328	0.66	+0.2
1,383,472	+		MPMX19_01328	0.66	-1.2
1,383,472	+		MPMX19_01328	0.66	-1.0
1,383,472	+		MPMX19_01328	0.66	+0.2
1,383,472	+		MPMX19_01328	0.66	+0.4
1,383,472	+		MPMX19_01328	0.66	-1.1
1,383,472	+		MPMX19_01328	0.66	-0.8
1,383,472	+		MPMX19_01328	0.66	-0.4
1,383,472	+		MPMX19_01328	0.66	-1.3
1,383,472	+		MPMX19_01328	0.66	-1.2
1,383,472	+		MPMX19_01328	0.66	+0.1
1,383,472	+		MPMX19_01328	0.66	-0.0
1,383,472	+		MPMX19_01328	0.66	-1.2
1,383,472	+		MPMX19_01328	0.66	-0.9
1,383,472	+		MPMX19_01328	0.66	+0.7
1,383,473	-		MPMX19_01328	0.66	-0.3
1,383,473	-		MPMX19_01328	0.66	-1.5
1,383,473	-		MPMX19_01328	0.66	-0.1
1,383,473	-		MPMX19_01328	0.66	-0.9
1,383,473	-		MPMX19_01328	0.66	-0.6
1,383,473	-		MPMX19_01328	0.66	+0.4
1,383,473	-		MPMX19_01328	0.66	+1.0
1,383,473	-		MPMX19_01328	0.66	-0.3
1,383,473	-		MPMX19_01328	0.66	-0.5
1,383,473	-		MPMX19_01328	0.66	+0.6
1,383,473	-		MPMX19_01328	0.66	-1.5
1,383,473	-		MPMX19_01328	0.66	+0.7
1,383,473	-		MPMX19_01328	0.66	-1.6
1,383,473	-		MPMX19_01328	0.66	-0.0
1,383,473	-		MPMX19_01328	0.66	-0.9
1,383,473	-		MPMX19_01328	0.66	-0.6
1,383,473	-		MPMX19_01328	0.66	+0.1
1,383,473	-		MPMX19_01328	0.66	-0.4
1,383,473	-		MPMX19_01328	0.66	+0.7
1,383,473	-		MPMX19_01328	0.66	-0.2
1,383,473	-		MPMX19_01328	0.66	-0.1
1,383,473	-		MPMX19_01328	0.66	-1.3
1,383,473	-		MPMX19_01328	0.66	-0.4
1,383,473	-		MPMX19_01328	0.66	-0.4
1,383,473	-		MPMX19_01328	0.66	-0.1
1,383,473	-		MPMX19_01328	0.66	-2.3
1,383,473	-		MPMX19_01328	0.66	-2.3
1,383,473	-		MPMX19_01328	0.66	-0.9
1,383,473	-		MPMX19_01328	0.66	-0.0
1,383,473	-		MPMX19_01328	0.66	-0.6
1,383,473	-		MPMX19_01328	0.66	-0.3
1,383,473	-		MPMX19_01328	0.66	-0.6
1,383,473	-		MPMX19_01328	0.66	+0.2
1,383,473	-		MPMX19_01328	0.66	+0.4
1,383,745	+				-0.5
1,383,745	+				-0.4
1,383,745	+				-0.8
1,383,745	+				-0.8
1,383,746	-				-2.5
1,383,746	-				-0.6
1,383,746	-				+0.2
1,383,833	+				+0.4
1,383,833	+				+0.2
1,383,834	-				+0.2
1,383,862	-				-0.6
1,383,862	-				-0.3
1,383,862	-				-2.3
1,383,862	-				+0.4
1,383,862	-				-0.5
1,383,887	+				-1.0
1,383,887	+				-0.6
1,383,887	+				+0.1
1,383,888	-				-0.7
1,383,888	-				-0.8
1,383,888	-				-1.3
1,383,933	+		MPMX19_01329	0.14	-1.4
1,383,933	+		MPMX19_01329	0.14	+0.1
1,383,933	+		MPMX19_01329	0.14	+0.1
1,383,933	+		MPMX19_01329	0.14	+0.2
1,383,933	+		MPMX19_01329	0.14	-0.3
1,383,933	+		MPMX19_01329	0.14	-0.0
1,383,933	+		MPMX19_01329	0.14	+0.8
1,383,933	+		MPMX19_01329	0.14	-0.6
1,383,933	+		MPMX19_01329	0.14	-1.0
1,383,933	+		MPMX19_01329	0.14	-1.9
1,383,933	+		MPMX19_01329	0.14	-1.0
1,383,933	+		MPMX19_01329	0.14	+0.4
1,383,933	+		MPMX19_01329	0.14	-0.3
1,383,933	+		MPMX19_01329	0.14	-0.6
1,383,933	+		MPMX19_01329	0.14	-0.6
1,383,934	-		MPMX19_01329	0.14	-1.7
1,383,934	-		MPMX19_01329	0.14	-1.5
1,383,934	-		MPMX19_01329	0.14	-2.2
1,383,934	-		MPMX19_01329	0.14	+1.0
1,383,934	-		MPMX19_01329	0.14	-1.2
1,384,582	+				-1.2
1,384,582	+				-0.3
1,384,582	+				-1.2
1,384,582	+				-0.3
1,384,582	+				-0.8
1,384,582	+				-0.8
1,384,582	+				-0.3
1,384,582	+				+0.1
1,384,582	+				-0.3
1,384,582	+				-1.1
1,384,582	+				-0.8
1,384,582	+				-0.7
1,384,583	-				-1.0
1,384,583	-				-0.6
1,384,583	-				-2.0
1,384,583	-				+0.3
1,384,583	-				+0.3
1,384,583	-				-0.6
1,384,583	-				-1.7
1,384,583	-				+0.1
1,384,893	+		MPMX19_01330	0.33	+0.3
1,384,893	+		MPMX19_01330	0.33	-0.0
1,384,893	+		MPMX19_01330	0.33	+0.4
1,384,893	+		MPMX19_01330	0.33	+0.2
1,384,893	+		MPMX19_01330	0.33	-1.2
1,384,893	+		MPMX19_01330	0.33	-1.0
1,384,893	+		MPMX19_01330	0.33	-0.0
1,384,894	-		MPMX19_01330	0.34	-0.5
1,384,894	-		MPMX19_01330	0.34	-1.4
1,384,894	-		MPMX19_01330	0.34	-1.0
1,384,951	+		MPMX19_01330	0.40	-1.6
1,385,412	+				-0.1
1,385,412	+				+0.1
1,385,412	+				+1.0
1,385,412	+				-0.2
1,385,412	+				+0.2
1,385,412	+				-0.3
1,385,412	+				+0.8
1,385,412	+				+0.6
1,385,412	+				-1.3
1,385,412	+				+1.3
1,385,412	+				-0.4
1,385,412	+				-1.2
1,385,412	+				+0.2
1,385,412	+				-1.6
1,385,412	+				-1.5
1,385,412	+				+0.3
1,385,413	-				-0.8
1,385,413	-				-0.6
1,385,413	-				+0.8
1,385,413	-				+0.7
1,385,413	-				-1.3
1,385,413	-				-2.1
1,385,413	-				+1.5
1,385,413	-				+0.3
1,385,413	-				+0.2
1,385,413	-				-0.0
1,385,413	-				+1.0
1,385,413	-				-1.0
1,385,413	-				+0.2
1,385,413	-				+0.4
1,385,413	-				-1.6
1,385,413	-				+0.6