Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01277

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,331,134	+		MPMX19_01276	0.32	+0.8
1,331,177	-		MPMX19_01276	0.35	-0.6
1,331,177	-		MPMX19_01276	0.35	-0.2
1,331,177	-		MPMX19_01276	0.35	-0.9
1,331,177	-		MPMX19_01276	0.35	-2.5
1,331,177	-		MPMX19_01276	0.35	-0.6
1,331,177	-		MPMX19_01276	0.35	-0.4
1,331,177	-		MPMX19_01276	0.35	-0.9
1,331,177	-		MPMX19_01276	0.35	+0.1
1,331,177	-		MPMX19_01276	0.35	-0.0
1,331,177	-		MPMX19_01276	0.35	-0.2
1,331,177	-		MPMX19_01276	0.35	-1.9
1,331,177	-		MPMX19_01276	0.35	-2.2
1,331,177	-		MPMX19_01276	0.35	-0.6
1,331,414	-		MPMX19_01276	0.52	-1.2
1,331,414	-		MPMX19_01276	0.52	+0.1
1,331,414	-		MPMX19_01276	0.52	-0.8
1,331,414	-		MPMX19_01276	0.52	-1.0
1,331,414	-		MPMX19_01276	0.52	-1.3
1,331,414	-		MPMX19_01276	0.52	+0.6
1,331,414	-		MPMX19_01276	0.52	-1.1
1,331,414	-		MPMX19_01276	0.52	+0.8
1,331,414	-		MPMX19_01276	0.52	-0.2
1,331,746	+		MPMX19_01276	0.76	-2.1
1,331,746	+		MPMX19_01276	0.76	+0.4
1,331,761	+		MPMX19_01276	0.77	-0.2
1,331,761	+		MPMX19_01276	0.77	-0.8
1,331,761	+		MPMX19_01276	0.77	-0.1
1,331,761	+		MPMX19_01276	0.77	-1.2
1,331,761	+		MPMX19_01276	0.77	-1.2
1,331,761	+		MPMX19_01276	0.77	-0.1
1,331,761	+		MPMX19_01276	0.77	+0.2
1,331,761	+		MPMX19_01276	0.77	+1.1
1,331,761	+		MPMX19_01276	0.77	-0.7
1,331,762	-		MPMX19_01276	0.77	-0.1
1,331,762	-		MPMX19_01276	0.77	-0.2
1,331,762	-		MPMX19_01276	0.77	-0.5
1,331,762	-		MPMX19_01276	0.77	-0.2
1,331,762	-		MPMX19_01276	0.77	+0.7
1,332,052	+				+1.6
1,332,052	+				-0.0
1,332,052	+				+0.7
1,332,052	+				-2.2
1,332,052	+				-0.7
1,332,052	+				-1.0
1,332,052	+				-0.0
1,332,308	+		MPMX19_01277	0.54	-2.3
1,332,308	+		MPMX19_01277	0.54	-2.0
1,332,308	+		MPMX19_01277	0.54	-1.2
1,332,308	+		MPMX19_01277	0.54	-0.6
1,332,308	+		MPMX19_01277	0.54	-1.0
1,332,308	+		MPMX19_01277	0.54	+0.4
1,332,308	+		MPMX19_01277	0.54	-0.8
1,332,308	+		MPMX19_01277	0.54	-0.0
1,332,308	+		MPMX19_01277	0.54	-0.6
1,332,308	+		MPMX19_01277	0.54	+0.2
1,332,308	+		MPMX19_01277	0.54	-1.0
1,332,308	+		MPMX19_01277	0.54	-0.8
1,332,308	+		MPMX19_01277	0.54	-1.7
1,332,308	+		MPMX19_01277	0.54	-1.6
1,332,308	+		MPMX19_01277	0.54	-1.1
1,332,308	+		MPMX19_01277	0.54	-0.5
1,332,308	+		MPMX19_01277	0.54	-2.1
1,332,308	+		MPMX19_01277	0.54	-2.3
1,332,308	+		MPMX19_01277	0.54	-1.5
1,332,308	+		MPMX19_01277	0.54	-0.6
1,332,308	+		MPMX19_01277	0.54	-0.7
1,332,308	+		MPMX19_01277	0.54	+0.5
1,332,308	+		MPMX19_01277	0.54	-1.8
1,332,308	+		MPMX19_01277	0.54	-2.4
1,332,308	+		MPMX19_01277	0.54	-1.1
1,332,308	+		MPMX19_01277	0.54	-0.5
1,332,308	+		MPMX19_01277	0.54	-0.2
1,332,308	+		MPMX19_01277	0.54	-1.5
1,332,308	+		MPMX19_01277	0.54	-1.3
1,332,308	+		MPMX19_01277	0.54	-1.1
1,332,308	+		MPMX19_01277	0.54	-2.7
1,332,308	+		MPMX19_01277	0.54	-1.7
1,332,308	+		MPMX19_01277	0.54	-0.4
1,332,309	-		MPMX19_01277	0.54	+1.0
1,332,311	+		MPMX19_01277	0.55	-0.3
1,332,311	+		MPMX19_01277	0.55	-0.3
1,332,312	-		MPMX19_01277	0.55	-0.6
1,332,312	-		MPMX19_01277	0.55	-1.0
1,332,312	-		MPMX19_01277	0.55	+0.8
1,332,474	+				-1.0
1,332,474	+				+0.7
1,332,475	-				-0.8
1,332,507	+				-0.8
1,332,507	+				-0.6
1,332,507	+				-1.3
1,332,507	+				-0.9
1,332,507	+				-0.0
1,332,507	+				-0.5
1,332,507	+				-0.4
1,332,507	+				-1.3
1,332,507	+				-0.5
1,332,508	-				-0.3
1,332,508	-				-0.1
1,332,508	-				-0.2
1,332,508	-				-1.5
1,332,508	-				-1.4
1,332,508	-				+1.4
1,332,508	-				+0.6
1,332,508	-				-0.9
1,332,508	-				-1.8
1,332,508	-				-2.9
1,332,508	-				-1.2
1,332,947	-		MPMX19_01278	0.36	-0.6
1,332,947	-		MPMX19_01278	0.36	-1.3
1,332,947	-		MPMX19_01278	0.36	-0.9
1,332,947	-		MPMX19_01278	0.36	+0.8
1,332,947	-		MPMX19_01278	0.36	-0.3
1,332,947	-		MPMX19_01278	0.36	-0.3
1,332,947	-		MPMX19_01278	0.36	-1.0
1,332,947	-		MPMX19_01278	0.36	-1.2
1,332,947	-		MPMX19_01278	0.36	-0.4
1,332,947	-		MPMX19_01278	0.36	-0.6
1,332,947	-		MPMX19_01278	0.36	-0.9
1,333,207	+		MPMX19_01278	0.59	+0.5
1,333,238	-		MPMX19_01278	0.62	-0.4
1,333,238	-		MPMX19_01278	0.62	-1.3
1,333,238	-		MPMX19_01278	0.62	+1.0
1,333,238	-		MPMX19_01278	0.62	-0.9
1,333,238	-		MPMX19_01278	0.62	+1.1
1,333,238	-		MPMX19_01278	0.62	+1.0
1,333,238	-		MPMX19_01278	0.62	-1.3
1,333,366	+		MPMX19_01278	0.73	+0.2
1,333,366	+		MPMX19_01278	0.73	-1.0
1,333,366	+		MPMX19_01278	0.73	+0.8
1,333,366	+		MPMX19_01278	0.73	+0.5
1,333,366	+		MPMX19_01278	0.73	-0.5
1,333,366	+		MPMX19_01278	0.73	-0.8
1,333,366	+		MPMX19_01278	0.73	-0.3
1,333,366	+		MPMX19_01278	0.73	-1.7
1,333,366	+		MPMX19_01278	0.73	-1.4
1,333,366	+		MPMX19_01278	0.73	-2.2
1,333,366	+		MPMX19_01278	0.73	-1.6
1,333,366	+		MPMX19_01278	0.73	-0.3
1,333,366	+		MPMX19_01278	0.73	+0.4
1,333,366	+		MPMX19_01278	0.73	-0.7