Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01274

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,329,367	+		MPMX19_01273	0.57	+0.5
1,329,368	-		MPMX19_01273	0.57	-0.1
1,329,540	+		MPMX19_01273	0.74	-0.1
1,329,540	+		MPMX19_01273	0.74	+0.2
1,329,540	+		MPMX19_01273	0.74	-1.3
1,329,540	+		MPMX19_01273	0.74	-0.6
1,329,540	+		MPMX19_01273	0.74	+0.6
1,329,540	+		MPMX19_01273	0.74	-0.6
1,329,540	+		MPMX19_01273	0.74	-0.5
1,329,540	+		MPMX19_01273	0.74	-0.5
1,329,540	+		MPMX19_01273	0.74	-0.5
1,329,540	+		MPMX19_01273	0.74	-0.6
1,329,540	+		MPMX19_01273	0.74	+0.7
1,329,541	-		MPMX19_01273	0.74	-1.0
1,329,541	-		MPMX19_01273	0.74	-0.7
1,329,541	-		MPMX19_01273	0.74	+1.2
1,329,541	-		MPMX19_01273	0.74	-0.5
1,329,541	-		MPMX19_01273	0.74	-0.3
1,329,541	-		MPMX19_01273	0.74	-0.0
1,329,541	-		MPMX19_01273	0.74	+0.3
1,329,541	-		MPMX19_01273	0.74	-1.7
1,329,541	-		MPMX19_01273	0.74	+1.0
1,329,541	-		MPMX19_01273	0.74	-0.4
1,329,541	-		MPMX19_01273	0.74	+0.1
1,329,687	+		MPMX19_01273	0.88	+0.2
1,329,687	+		MPMX19_01273	0.88	+0.7
1,329,687	+		MPMX19_01273	0.88	-0.9
1,329,687	+		MPMX19_01273	0.88	-1.1
1,329,688	-		MPMX19_01273	0.88	-0.5
1,329,688	-		MPMX19_01273	0.88	-0.0
1,329,688	-		MPMX19_01273	0.88	-0.3
1,329,688	-		MPMX19_01273	0.88	+1.0
1,329,688	-		MPMX19_01273	0.88	+0.1
1,329,688	-		MPMX19_01273	0.88	-0.3
1,329,688	-		MPMX19_01273	0.88	+1.0
1,329,830	+				-1.6
1,329,844	+				+1.0
1,329,844	+				-0.3
1,329,848	+				-0.1
1,329,848	+				+0.1
1,329,849	-				-1.7
1,330,017	+		MPMX19_01274	0.15	+1.1
1,330,017	+		MPMX19_01274	0.15	-1.8
1,330,017	+		MPMX19_01274	0.15	-1.5
1,330,017	+		MPMX19_01274	0.15	-0.6
1,330,017	+		MPMX19_01274	0.15	-1.6
1,330,017	+		MPMX19_01274	0.15	-0.2
1,330,017	+		MPMX19_01274	0.15	-1.8
1,330,017	+		MPMX19_01274	0.15	+0.3
1,330,017	+		MPMX19_01274	0.15	-0.2
1,330,017	+		MPMX19_01274	0.15	-0.3
1,330,018	-		MPMX19_01274	0.16	-1.2
1,330,018	-		MPMX19_01274	0.16	+1.0
1,330,018	-		MPMX19_01274	0.16	+0.2
1,330,018	-		MPMX19_01274	0.16	-1.8
1,330,018	-		MPMX19_01274	0.16	-1.1
1,330,018	-		MPMX19_01274	0.16	+0.8
1,330,018	-		MPMX19_01274	0.16	-0.3
1,330,018	-		MPMX19_01274	0.16	-0.0
1,330,188	+				-1.2
1,330,188	+				-0.4
1,330,188	+				-0.9
1,330,188	+				-0.6
1,330,188	+				+2.0
1,330,188	+				-0.0
1,330,189	-				-0.7
1,330,240	+				-1.6
1,330,240	+				-1.4
1,330,240	+				-1.3
1,330,240	+				-0.2
1,330,240	+				-1.0
1,330,241	-				+0.1
1,330,241	-				+0.5
1,330,241	-				-1.0
1,330,241	-				-1.7
1,330,250	+				-0.9
1,330,250	+				-0.8
1,330,250	+				-0.5
1,330,250	+				+0.4
1,330,250	+				-0.6
1,330,250	+				-0.9
1,330,250	+				+0.2
1,330,250	+				-0.8
1,330,250	+				-0.9
1,330,251	-				-2.0
1,330,251	-				-2.0
1,330,251	-				-0.6
1,330,251	-				-1.1
1,330,251	-				+0.2
1,330,251	-				-1.2
1,330,251	-				-1.4
1,330,251	-				-0.0
1,330,251	-				-1.1
1,330,284	-				-0.5
1,330,284	-				-0.8
1,330,363	+		MPMX19_01275	0.23	+0.7
1,330,363	+		MPMX19_01275	0.23	-0.3
1,330,364	-		MPMX19_01275	0.24	+0.7
1,330,364	-		MPMX19_01275	0.24	-1.0
1,330,378	+		MPMX19_01275	0.28	-2.3
1,330,378	+		MPMX19_01275	0.28	-0.3
1,330,378	+		MPMX19_01275	0.28	+0.7
1,330,378	+		MPMX19_01275	0.28	+0.5
1,330,378	+		MPMX19_01275	0.28	-0.2
1,330,378	+		MPMX19_01275	0.28	-0.8
1,330,378	+		MPMX19_01275	0.28	+0.5
1,330,378	+		MPMX19_01275	0.28	-0.4
1,330,378	+		MPMX19_01275	0.28	-0.5
1,330,378	+		MPMX19_01275	0.28	-0.1
1,330,378	+		MPMX19_01275	0.28	-1.5
1,330,378	+		MPMX19_01275	0.28	-0.4
1,330,378	+		MPMX19_01275	0.28	+0.8
1,330,378	+		MPMX19_01275	0.28	-1.2
1,330,378	+		MPMX19_01275	0.28	-0.0
1,330,378	+		MPMX19_01275	0.28	-0.1
1,330,378	+		MPMX19_01275	0.28	+0.4
1,330,378	+		MPMX19_01275	0.28	-2.5
1,330,378	+		MPMX19_01275	0.28	-0.3
1,330,379	-		MPMX19_01275	0.29	-0.7
1,330,379	-		MPMX19_01275	0.29	-1.6
1,330,379	-		MPMX19_01275	0.29	+0.1
1,330,379	-		MPMX19_01275	0.29	-2.3
1,330,379	-		MPMX19_01275	0.29	+1.2
1,330,379	-		MPMX19_01275	0.29	-0.3
1,330,379	-		MPMX19_01275	0.29	-0.3
1,330,525	+		MPMX19_01275	0.80	-1.1
1,330,525	+		MPMX19_01275	0.80	-1.0
1,330,525	+		MPMX19_01275	0.80	+0.4
1,330,525	+		MPMX19_01275	0.80	-0.1
1,330,525	+		MPMX19_01275	0.80	-1.0
1,330,525	+		MPMX19_01275	0.80	-0.5
1,330,525	+		MPMX19_01275	0.80	-0.8
1,330,525	+		MPMX19_01275	0.80	-0.3
1,330,525	+		MPMX19_01275	0.80	+0.4
1,330,525	+		MPMX19_01275	0.80	-0.2
1,330,525	+		MPMX19_01275	0.80	+0.7
1,330,526	-		MPMX19_01275	0.80	-0.2
1,330,526	-		MPMX19_01275	0.80	-1.0
1,330,526	-		MPMX19_01275	0.80	-1.2
1,330,526	-		MPMX19_01275	0.80	+1.0
1,330,526	-		MPMX19_01275	0.80	-1.1
1,330,526	-		MPMX19_01275	0.80	-0.3
1,330,526	-		MPMX19_01275	0.80	-0.5
1,330,526	-		MPMX19_01275	0.80	-1.4
1,330,526	-		MPMX19_01275	0.80	-1.9
1,330,526	-		MPMX19_01275	0.80	-1.8
1,330,526	-		MPMX19_01275	0.80	-0.9
1,330,526	-		MPMX19_01275	0.80	-0.8
1,330,526	-		MPMX19_01275	0.80	-0.4
1,330,526	-		MPMX19_01275	0.80	-1.1
1,330,534	+		MPMX19_01275	0.83	-0.7
1,330,534	+		MPMX19_01275	0.83	-0.3
1,330,534	+		MPMX19_01275	0.83	-1.3
1,330,534	+		MPMX19_01275	0.83	+0.3
1,330,534	+		MPMX19_01275	0.83	-0.3
1,330,534	+		MPMX19_01275	0.83	+0.3
1,330,534	+		MPMX19_01275	0.83	-1.5
1,330,535	-		MPMX19_01275	0.83	-1.6
1,330,535	-		MPMX19_01275	0.83	-2.0
1,330,535	-		MPMX19_01275	0.83	+0.7
1,330,535	-		MPMX19_01275	0.83	-0.8
1,330,535	-		MPMX19_01275	0.83	-0.0
1,330,535	-		MPMX19_01275	0.83	+0.5
1,330,535	-		MPMX19_01275	0.83	-1.9
1,330,535	-		MPMX19_01275	0.83	-1.5
1,330,535	-		MPMX19_01275	0.83	+0.1
1,330,535	-		MPMX19_01275	0.83	-0.8
1,330,535	-		MPMX19_01275	0.83	+0.4
1,330,535	-		MPMX19_01275	0.83	-0.6
1,330,535	-		MPMX19_01275	0.83	-0.2
1,330,535	-		MPMX19_01275	0.83	-0.2
1,330,535	-		MPMX19_01275	0.83	-1.4
1,330,573	+				-0.7
1,330,573	+				-0.1
1,330,573	+				-0.8
1,330,573	+				-0.9
1,330,573	+				+0.2
1,330,573	+				-0.4
1,330,573	+				-1.3
1,330,573	+				-1.2
1,330,573	+				-0.6
1,330,574	-				-0.1
1,330,574	-				-1.4
1,330,574	-				-1.4
1,330,574	-				-0.0
1,330,574	-				-1.9
1,330,574	-				+1.6
1,330,574	-				-0.3
1,330,574	-				+0.7
1,330,574	-				+0.6
1,330,574	-				-0.8
1,330,574	-				-0.2
1,330,574	-				-0.7
1,330,574	-				-0.3
1,330,603	-				-0.6
1,330,603	-				+0.5
1,330,677	+				-2.3
1,330,677	+				-0.3
1,330,677	+				-2.5
1,330,677	+				-0.1
1,330,677	+				-0.4
1,330,677	+				-0.0
1,330,677	+				-0.5
1,330,677	+				-2.3
1,330,677	+				-0.4
1,330,677	+				+0.2
1,330,677	+				+0.4
1,330,677	+				-1.8
1,330,678	-				+0.5
1,330,678	-				-2.5
1,330,678	-				-1.1
1,330,678	-				-1.2
1,330,678	-				-1.3
1,330,678	-				-0.2
1,330,678	-				-0.7
1,330,678	-				-0.6
1,330,678	-				+0.1
1,330,678	-				+0.5
1,330,678	-				+0.4
1,330,678	-				-0.4
1,330,858	+		MPMX19_01276	0.13	+0.1
1,330,858	+		MPMX19_01276	0.13	-1.4
1,330,858	+		MPMX19_01276	0.13	-2.1
1,330,858	+		MPMX19_01276	0.13	-0.5
1,330,858	+		MPMX19_01276	0.13	+0.8
1,330,858	+		MPMX19_01276	0.13	-1.1
1,330,858	+		MPMX19_01276	0.13	-0.9
1,330,858	+		MPMX19_01276	0.13	-0.7
1,330,858	+		MPMX19_01276	0.13	-0.8
1,330,858	+		MPMX19_01276	0.13	-1.6
1,330,858	+		MPMX19_01276	0.13	-0.1
1,330,858	+		MPMX19_01276	0.13	-1.6
1,330,858	+		MPMX19_01276	0.13	-1.0
1,330,858	+		MPMX19_01276	0.13	-1.4
1,330,858	+		MPMX19_01276	0.13	-0.5
1,330,859	-		MPMX19_01276	0.13	-0.2
1,330,859	-		MPMX19_01276	0.13	-0.5
1,330,859	-		MPMX19_01276	0.13	+0.9
1,330,859	-		MPMX19_01276	0.13	-1.1
1,330,859	-		MPMX19_01276	0.13	+0.4
1,330,859	-		MPMX19_01276	0.13	-1.5
1,330,859	-		MPMX19_01276	0.13	-1.0
1,330,859	-		MPMX19_01276	0.13	-0.4
1,330,859	-		MPMX19_01276	0.13	-0.5
1,330,859	-		MPMX19_01276	0.13	-0.4
1,330,859	-		MPMX19_01276	0.13	-0.8
1,330,859	-		MPMX19_01276	0.13	-0.7
1,331,053	+		MPMX19_01276	0.27	-0.2
1,331,053	+		MPMX19_01276	0.27	+1.5
1,331,053	+		MPMX19_01276	0.27	-0.2
1,331,053	+		MPMX19_01276	0.27	-0.2
1,331,053	+		MPMX19_01276	0.27	-0.3
1,331,053	+		MPMX19_01276	0.27	-0.0
1,331,053	+		MPMX19_01276	0.27	+0.3
1,331,053	+		MPMX19_01276	0.27	-1.2
1,331,053	+		MPMX19_01276	0.27	-0.6