Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01243

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,292,360	+				-0.2
1,292,360	+				-0.6
1,292,360	+				-1.2
1,292,360	+				-1.0
1,292,360	+				+0.3
1,292,360	+				+0.7
1,292,360	+				-2.1
1,292,360	+				-0.0
1,292,360	+				-1.8
1,292,360	+				-1.7
1,292,360	+				-2.0
1,292,360	+				-0.0
1,292,360	+				+1.7
1,292,360	+				+0.4
1,292,360	+				-0.0
1,292,361	-				-0.6
1,292,361	-				-0.9
1,292,361	-				-0.6
1,292,361	-				-2.2
1,292,361	-				+0.2
1,292,361	-				-1.0
1,292,361	-				-0.1
1,292,393	+		MPMX19_01242	0.12	-1.3
1,292,393	+		MPMX19_01242	0.12	-1.7
1,292,393	+		MPMX19_01242	0.12	-0.8
1,292,393	+		MPMX19_01242	0.12	+1.2
1,292,393	+		MPMX19_01242	0.12	+1.1
1,292,393	+		MPMX19_01242	0.12	+0.8
1,292,393	+		MPMX19_01242	0.12	-2.6
1,292,393	+		MPMX19_01242	0.12	-0.3
1,292,393	+		MPMX19_01242	0.12	-1.0
1,292,393	+		MPMX19_01242	0.12	+0.1
1,292,394	-		MPMX19_01242	0.12	-0.9
1,292,394	-		MPMX19_01242	0.12	-0.3
1,292,621	+		MPMX19_01242	0.35	+0.3
1,292,621	+		MPMX19_01242	0.35	-0.1
1,292,621	+		MPMX19_01242	0.35	-1.8
1,292,621	+		MPMX19_01242	0.35	+0.5
1,292,621	+		MPMX19_01242	0.35	-0.3
1,292,621	+		MPMX19_01242	0.35	-1.7
1,292,621	+		MPMX19_01242	0.35	-2.2
1,292,621	+		MPMX19_01242	0.35	-1.2
1,292,622	-		MPMX19_01242	0.36	-1.1
1,292,622	-		MPMX19_01242	0.36	-0.3
1,292,622	-		MPMX19_01242	0.36	-2.0
1,292,622	-		MPMX19_01242	0.36	+0.8
1,292,622	-		MPMX19_01242	0.36	-1.2
1,292,622	-		MPMX19_01242	0.36	+0.1
1,292,622	-		MPMX19_01242	0.36	-0.6
1,292,622	-		MPMX19_01242	0.36	-0.1
1,292,622	-		MPMX19_01242	0.36	-1.5
1,292,622	-		MPMX19_01242	0.36	+0.0
1,292,622	-		MPMX19_01242	0.36	+0.4
1,292,732	+		MPMX19_01242	0.47	-1.1
1,292,732	+		MPMX19_01242	0.47	-0.3
1,292,732	+		MPMX19_01242	0.47	-0.3
1,292,732	+		MPMX19_01242	0.47	+0.6
1,292,732	+		MPMX19_01242	0.47	+0.7
1,292,732	+		MPMX19_01242	0.47	+1.1
1,292,732	+		MPMX19_01242	0.47	-1.7
1,292,732	+		MPMX19_01242	0.47	-1.7
1,292,732	+		MPMX19_01242	0.47	-1.7
1,292,732	+		MPMX19_01242	0.47	-0.1
1,292,732	+		MPMX19_01242	0.47	-1.7
1,292,732	+		MPMX19_01242	0.47	-2.3
1,292,732	+		MPMX19_01242	0.47	+0.4
1,292,732	+		MPMX19_01242	0.47	-0.1
1,292,732	+		MPMX19_01242	0.47	-1.5
1,292,732	+		MPMX19_01242	0.47	-0.7
1,292,732	+		MPMX19_01242	0.47	-0.1
1,292,732	+		MPMX19_01242	0.47	-0.5
1,292,732	+		MPMX19_01242	0.47	+1.5
1,292,732	+		MPMX19_01242	0.47	-1.0
1,292,732	+		MPMX19_01242	0.47	-1.5
1,292,732	+		MPMX19_01242	0.47	-1.0
1,292,732	+		MPMX19_01242	0.47	-0.0
1,292,732	+		MPMX19_01242	0.47	-0.0
1,292,732	+		MPMX19_01242	0.47	+0.7
1,292,732	+		MPMX19_01242	0.47	-0.6
1,292,732	+		MPMX19_01242	0.47	-1.5
1,292,732	+		MPMX19_01242	0.47	-0.9
1,292,732	+		MPMX19_01242	0.47	+0.3
1,292,733	-		MPMX19_01242	0.47	-0.3
1,292,733	-		MPMX19_01242	0.47	-0.6
1,292,733	-		MPMX19_01242	0.47	-1.3
1,292,733	-		MPMX19_01242	0.47	-1.5
1,292,733	-		MPMX19_01242	0.47	-0.5
1,292,733	-		MPMX19_01242	0.47	-0.6
1,292,733	-		MPMX19_01242	0.47	+0.2
1,292,733	-		MPMX19_01242	0.47	-0.2
1,292,733	-		MPMX19_01242	0.47	-2.1
1,292,733	-		MPMX19_01242	0.47	-0.6
1,292,733	-		MPMX19_01242	0.47	+0.0
1,292,733	-		MPMX19_01242	0.47	-1.2
1,292,733	-		MPMX19_01242	0.47	-0.0
1,292,733	-		MPMX19_01242	0.47	-1.0
1,292,733	-		MPMX19_01242	0.47	-0.2
1,292,733	-		MPMX19_01242	0.47	-1.7
1,293,056	+		MPMX19_01242	0.81	+0.4
1,293,056	+		MPMX19_01242	0.81	+0.0
1,293,056	+		MPMX19_01242	0.81	-0.3
1,293,056	+		MPMX19_01242	0.81	-0.3
1,293,057	-		MPMX19_01242	0.81	+0.8
1,293,057	-		MPMX19_01242	0.81	-0.6
1,293,057	-		MPMX19_01242	0.81	-0.7
1,293,057	-		MPMX19_01242	0.81	-2.4
1,293,057	-		MPMX19_01242	0.81	-0.2
1,293,057	-		MPMX19_01242	0.81	+0.3
1,293,057	-		MPMX19_01242	0.81	-0.7
1,293,057	-		MPMX19_01242	0.81	-1.2
1,293,146	+				-1.1
1,293,146	+				-0.7
1,293,146	+				+0.4
1,293,146	+				-1.1
1,293,146	+				-0.6
1,293,146	+				-0.2
1,293,146	+				+1.1
1,293,146	+				+0.1
1,293,146	+				+0.2
1,293,146	+				-1.2
1,293,146	+				+0.7
1,293,146	+				+1.3
1,293,146	+				+0.2
1,293,146	+				-2.2
1,293,146	+				-2.0
1,293,146	+				-0.9
1,293,146	+				+0.7
1,293,146	+				-0.2
1,293,146	+				+0.5
1,293,146	+				-0.2
1,293,146	+				-1.2
1,293,146	+				-0.6
1,293,146	+				+0.7
1,293,147	-				-1.2
1,293,147	-				-0.7
1,293,147	-				+0.4
1,293,147	-				-2.0
1,293,147	-				-0.3
1,293,147	-				-0.7
1,293,147	-				+0.7
1,293,147	-				+0.8
1,293,147	-				-0.8
1,293,147	-				-0.2
1,293,147	-				+1.1
1,293,147	-				-0.3
1,293,147	-				-1.5
1,293,147	-				-0.4
1,293,147	-				-0.3
1,293,147	-				-0.3
1,293,302	-				-0.6
1,293,302	-				-0.3
1,293,312	+				+0.5
1,293,312	+				-1.6
1,293,312	+				-0.3
1,293,363	+				-1.2
1,293,363	+				+0.4
1,293,363	+				+1.0
1,293,363	+				-1.2
1,293,363	+				+0.4
1,293,364	-				-0.8
1,293,364	-				+0.7
1,293,364	-				+1.0
1,293,430	+		MPMX19_01243	0.15	-1.7
1,293,431	-		MPMX19_01243	0.15	+1.7
1,293,511	+		MPMX19_01243	0.31	+1.3
1,293,511	+		MPMX19_01243	0.31	-0.6
1,293,511	+		MPMX19_01243	0.31	-0.6
1,293,512	-		MPMX19_01243	0.31	+0.1
1,293,739	+		MPMX19_01243	0.75	+2.0
1,293,879	+				+0.4
1,293,879	+				-0.3
1,293,880	-				+2.0
1,293,880	-				-0.8
1,294,043	+		MPMX19_01244	0.54	-1.0
1,294,043	+		MPMX19_01244	0.54	-0.0
1,294,043	+		MPMX19_01244	0.54	-0.0
1,294,043	+		MPMX19_01244	0.54	+0.4
1,294,043	+		MPMX19_01244	0.54	-0.3
1,294,043	+		MPMX19_01244	0.54	-2.0
1,294,043	+		MPMX19_01244	0.54	-1.3
1,294,044	-		MPMX19_01244	0.54	-0.2
1,294,044	-		MPMX19_01244	0.54	-0.0
1,294,044	-		MPMX19_01244	0.54	-0.1
1,294,044	-		MPMX19_01244	0.54	+0.4
1,294,044	-		MPMX19_01244	0.54	-0.6
1,294,260	+				-1.0
1,294,260	+				+0.7
1,294,260	+				-0.8
1,294,261	-				-0.8
1,294,261	-				-0.8
1,294,261	-				+0.3
1,294,281	+				-1.4
1,294,290	+				-1.5
1,294,290	+				-1.2
1,294,290	+				-1.6
1,294,290	+				-0.2
1,294,290	+				+0.2
1,294,290	+				-0.2
1,294,290	+				-0.2
1,294,290	+				-0.6
1,294,290	+				+1.2
1,294,290	+				+1.2
1,294,290	+				+0.2
1,294,290	+				-0.8
1,294,290	+				-0.8
1,294,290	+				-2.0
1,294,290	+				-0.2
1,294,290	+				-0.1
1,294,290	+				-1.4
1,294,290	+				+1.1
1,294,290	+				-0.7
1,294,290	+				-0.6
1,294,291	-				-1.5
1,294,291	-				-0.2
1,294,291	-				-0.6
1,294,291	-				-0.8
1,294,291	-				-0.6
1,294,291	-				-0.6
1,294,291	-				+0.0
1,294,291	-				-1.1
1,294,291	-				+0.2
1,294,291	-				-0.6
1,294,291	-				+1.0
1,294,291	-				+1.0
1,294,291	-				+2.0
1,294,291	-				+0.6
1,294,291	-				-2.0
1,294,291	-				-0.8
1,294,291	-				+0.4
1,294,291	-				-0.8
1,294,291	-				-0.1
1,294,291	-				+2.0
1,294,291	-				-1.8
1,294,291	-				-2.0
1,294,291	-				-0.3
1,294,309	+		MPMX19_01245	0.11	+0.1
1,294,309	+		MPMX19_01245	0.11	-0.8
1,294,309	+		MPMX19_01245	0.11	-0.0
1,294,309	+		MPMX19_01245	0.11	-1.6
1,294,309	+		MPMX19_01245	0.11	+0.1
1,294,309	+		MPMX19_01245	0.11	-0.1
1,294,309	+		MPMX19_01245	0.11	+0.5
1,294,309	+		MPMX19_01245	0.11	-1.8
1,294,309	+		MPMX19_01245	0.11	-0.9
1,294,309	+		MPMX19_01245	0.11	+0.5
1,294,309	+		MPMX19_01245	0.11	-0.6
1,294,309	+		MPMX19_01245	0.11	+0.0
1,294,309	+		MPMX19_01245	0.11	+0.4
1,294,309	+		MPMX19_01245	0.11	+0.1
1,294,310	-		MPMX19_01245	0.11	-0.9
1,294,310	-		MPMX19_01245	0.11	+1.2
1,294,310	-		MPMX19_01245	0.11	-1.8
1,294,310	-		MPMX19_01245	0.11	-0.8
1,294,310	-		MPMX19_01245	0.11	+0.3
1,294,310	-		MPMX19_01245	0.11	-1.8
1,294,310	-		MPMX19_01245	0.11	-2.3
1,294,310	-		MPMX19_01245	0.11	-0.6
1,294,310	-		MPMX19_01245	0.11	+1.6
1,294,310	-		MPMX19_01245	0.11	+0.3
1,294,310	-		MPMX19_01245	0.11	+0.2
1,294,310	-		MPMX19_01245	0.11	-0.0
1,294,310	-		MPMX19_01245	0.11	-1.2
1,294,310	-		MPMX19_01245	0.11	-0.2
1,294,333	+		MPMX19_01245	0.14	-1.3
1,294,333	+		MPMX19_01245	0.14	+0.2
1,294,333	+		MPMX19_01245	0.14	-0.2
1,294,335	+		MPMX19_01245	0.14	-0.2
1,294,335	+		MPMX19_01245	0.14	+0.2
1,294,335	+		MPMX19_01245	0.14	-1.1
1,294,335	+		MPMX19_01245	0.14	-0.2
1,294,335	+		MPMX19_01245	0.14	-1.2
1,294,335	+		MPMX19_01245	0.14	-0.8
1,294,335	+		MPMX19_01245	0.14	-0.2
1,294,335	+		MPMX19_01245	0.14	-0.8
1,294,335	+		MPMX19_01245	0.14	-0.3
1,294,335	+		MPMX19_01245	0.14	-1.2
1,294,335	+		MPMX19_01245	0.14	-1.5
1,294,335	+		MPMX19_01245	0.14	+0.3