Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01228

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,279,838	-				+0.1
1,279,894	-				-0.2
1,279,894	-				+0.2
1,279,894	-				-0.0
1,279,899	-				-1.3
1,279,899	-				+0.2
1,279,899	-				+1.0
1,279,899	-				-0.5
1,279,899	-				+0.1
1,279,899	-				-1.0
1,279,899	-				-0.1
1,279,938	-		MPMX19_01229	0.13	+0.4
1,279,938	-		MPMX19_01229	0.13	-0.2
1,279,938	-		MPMX19_01229	0.13	-0.2
1,279,938	-		MPMX19_01229	0.13	+0.3
1,279,938	-		MPMX19_01229	0.13	-0.2
1,279,938	-		MPMX19_01229	0.13	+1.6
1,279,981	-		MPMX19_01229	0.27	-0.3
1,279,981	-		MPMX19_01229	0.27	-1.0
1,279,981	-		MPMX19_01229	0.27	-0.0
1,279,981	-		MPMX19_01229	0.27	-0.5
1,279,981	-		MPMX19_01229	0.27	-0.0
1,279,981	-		MPMX19_01229	0.27	-1.5
1,279,981	-		MPMX19_01229	0.27	+0.2
1,279,981	-		MPMX19_01229	0.27	-1.1
1,279,983	-		MPMX19_01229	0.28	-0.6
1,279,983	-		MPMX19_01229	0.28	-1.6
1,279,983	-		MPMX19_01229	0.28	-0.9
1,279,983	-		MPMX19_01229	0.28	+1.0
1,279,983	-		MPMX19_01229	0.28	-0.2
1,279,983	-		MPMX19_01229	0.28	-0.1
1,279,983	-		MPMX19_01229	0.28	-1.5
1,279,983	-		MPMX19_01229	0.28	+0.2
1,279,983	-		MPMX19_01229	0.28	-1.2
1,279,983	-		MPMX19_01229	0.28	-1.3
1,279,983	-		MPMX19_01229	0.28	+0.5
1,279,983	-		MPMX19_01229	0.28	-2.0
1,279,983	-		MPMX19_01229	0.28	-0.2
1,279,983	-		MPMX19_01229	0.28	-0.9
1,280,118	-		MPMX19_01229	0.73	+2.6
1,280,118	-		MPMX19_01229	0.73	-1.0
1,280,181	-				+0.4
1,280,181	-				+2.0
1,280,181	-				-1.7
1,280,181	-				+0.8
1,280,181	-				-1.0
1,280,181	-				-1.0
1,280,181	-				+0.4
1,280,181	-				-1.3
1,280,181	-				-1.5
1,280,181	-				+0.4
1,280,181	-				+1.4
1,280,181	-				-2.7
1,280,181	-				-1.3
1,280,181	-				+0.3
1,280,181	-				-0.2
1,280,181	-				-1.6
1,280,367	-				+0.2
1,280,367	-				+0.2
1,280,367	-				+0.4
1,280,367	-				-2.0
1,280,367	-				-1.0
1,280,367	-				-0.3
1,280,367	-				-1.3
1,280,367	-				+0.5