Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01221

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,270,967	+		MPMX19_01220	0.55	-0.8
1,270,967	+		MPMX19_01220	0.55	-0.8
1,270,967	+		MPMX19_01220	0.55	-0.3
1,270,967	+		MPMX19_01220	0.55	-1.3
1,270,967	+		MPMX19_01220	0.55	+0.0
1,270,968	-		MPMX19_01220	0.55	-0.0
1,270,968	-		MPMX19_01220	0.55	+0.2
1,271,024	+		MPMX19_01220	0.58	+2.0
1,271,024	+		MPMX19_01220	0.58	-0.2
1,271,024	+		MPMX19_01220	0.58	-0.5
1,271,024	+		MPMX19_01220	0.58	+1.4
1,271,024	+		MPMX19_01220	0.58	-1.4
1,271,024	+		MPMX19_01220	0.58	-0.9
1,271,024	+		MPMX19_01220	0.58	-0.5
1,271,025	-		MPMX19_01220	0.58	+0.0
1,271,025	-		MPMX19_01220	0.58	-0.7
1,271,025	-		MPMX19_01220	0.58	+0.4
1,271,025	-		MPMX19_01220	0.58	-1.2
1,271,042	+		MPMX19_01220	0.58	+0.2
1,271,042	+		MPMX19_01220	0.58	-1.0
1,271,042	+		MPMX19_01220	0.58	-0.6
1,271,042	+		MPMX19_01220	0.58	-0.3
1,271,042	+		MPMX19_01220	0.58	-0.9
1,271,043	-		MPMX19_01220	0.59	+0.4
1,271,043	-		MPMX19_01220	0.59	+0.4
1,271,043	-		MPMX19_01220	0.59	-0.0
1,271,043	-		MPMX19_01220	0.59	+0.0
1,271,043	-		MPMX19_01220	0.59	+0.5
1,271,057	+		MPMX19_01220	0.59	-0.5
1,271,057	+		MPMX19_01220	0.59	-0.6
1,271,057	+		MPMX19_01220	0.59	-0.3
1,271,057	+		MPMX19_01220	0.59	+0.3
1,271,057	+		MPMX19_01220	0.59	+0.1
1,271,057	+		MPMX19_01220	0.59	-0.0
1,271,057	+		MPMX19_01220	0.59	-0.1
1,271,057	+		MPMX19_01220	0.59	-0.3
1,271,057	+		MPMX19_01220	0.59	+0.7
1,271,058	-		MPMX19_01220	0.59	-0.0
1,271,058	-		MPMX19_01220	0.59	-0.1
1,271,058	-		MPMX19_01220	0.59	+2.4
1,271,058	-		MPMX19_01220	0.59	-0.9
1,271,058	-		MPMX19_01220	0.59	-0.7
1,271,058	-		MPMX19_01220	0.59	+0.7
1,271,058	-		MPMX19_01220	0.59	+0.4
1,271,058	-		MPMX19_01220	0.59	-1.3
1,271,058	-		MPMX19_01220	0.59	-1.2
1,271,058	-		MPMX19_01220	0.59	-1.0
1,271,058	-		MPMX19_01220	0.59	-0.3
1,271,058	-		MPMX19_01220	0.59	-0.2
1,271,146	+		MPMX19_01220	0.64	-1.2
1,271,146	+		MPMX19_01220	0.64	-0.3
1,271,146	+		MPMX19_01220	0.64	+0.4
1,271,146	+		MPMX19_01220	0.64	+0.2
1,271,146	+		MPMX19_01220	0.64	-1.2
1,271,146	+		MPMX19_01220	0.64	-0.1
1,271,147	-		MPMX19_01220	0.64	+0.4
1,271,147	-		MPMX19_01220	0.64	-0.0
1,271,147	-		MPMX19_01220	0.64	-1.0
1,271,147	-		MPMX19_01220	0.64	-0.1
1,271,147	-		MPMX19_01220	0.64	-2.1
1,271,147	-		MPMX19_01220	0.64	+0.2
1,271,147	-		MPMX19_01220	0.64	+1.4
1,271,264	+		MPMX19_01220	0.70	-1.2
1,271,264	+		MPMX19_01220	0.70	+0.7
1,271,264	+		MPMX19_01220	0.70	-0.8
1,271,264	+		MPMX19_01220	0.70	-0.7
1,271,264	+		MPMX19_01220	0.70	-0.9
1,271,264	+		MPMX19_01220	0.70	-0.5
1,271,264	+		MPMX19_01220	0.70	-1.3
1,271,264	+		MPMX19_01220	0.70	-0.4
1,271,264	+		MPMX19_01220	0.70	-1.0
1,271,264	+		MPMX19_01220	0.70	+1.2
1,271,264	+		MPMX19_01220	0.70	+1.0
1,271,264	+		MPMX19_01220	0.70	+0.2
1,271,264	+		MPMX19_01220	0.70	+1.0
1,271,264	+		MPMX19_01220	0.70	-0.1
1,271,264	+		MPMX19_01220	0.70	-2.6
1,271,264	+		MPMX19_01220	0.70	+1.6
1,271,264	+		MPMX19_01220	0.70	-1.4
1,271,264	+		MPMX19_01220	0.70	-0.7
1,271,264	+		MPMX19_01220	0.70	-0.3
1,271,264	+		MPMX19_01220	0.70	-0.9
1,271,264	+		MPMX19_01220	0.70	-1.8
1,271,264	+		MPMX19_01220	0.70	-2.1
1,271,264	+		MPMX19_01220	0.70	-0.6
1,271,265	-		MPMX19_01220	0.70	-1.7
1,271,265	-		MPMX19_01220	0.70	-1.5
1,271,265	-		MPMX19_01220	0.70	-1.1
1,271,265	-		MPMX19_01220	0.70	-1.7
1,271,265	-		MPMX19_01220	0.70	-0.3
1,271,265	-		MPMX19_01220	0.70	-0.3
1,271,265	-		MPMX19_01220	0.70	-0.1
1,271,265	-		MPMX19_01220	0.70	+1.0
1,271,265	-		MPMX19_01220	0.70	-0.4
1,271,265	-		MPMX19_01220	0.70	-0.6
1,271,265	-		MPMX19_01220	0.70	-1.2
1,271,265	-		MPMX19_01220	0.70	+0.4
1,271,265	-		MPMX19_01220	0.70	-0.6
1,271,265	-		MPMX19_01220	0.70	-1.6
1,271,265	-		MPMX19_01220	0.70	-0.6
1,271,265	-		MPMX19_01220	0.70	+0.3
1,271,265	-		MPMX19_01220	0.70	-1.5
1,271,535	+		MPMX19_01220	0.83	-0.2
1,271,535	+		MPMX19_01220	0.83	-0.2
1,271,536	-		MPMX19_01220	0.83	-0.8
1,271,574	-		MPMX19_01220	0.85	-0.2
1,271,597	+		MPMX19_01220	0.86	-1.3
1,271,597	+		MPMX19_01220	0.86	+0.1
1,271,597	+		MPMX19_01220	0.86	-0.8
1,271,597	+		MPMX19_01220	0.86	+1.0
1,271,597	+		MPMX19_01220	0.86	-0.7
1,271,597	+		MPMX19_01220	0.86	-1.8
1,271,598	-		MPMX19_01220	0.86	+1.4
1,271,598	-		MPMX19_01220	0.86	-0.2
1,271,598	-		MPMX19_01220	0.86	+0.1
1,271,598	-		MPMX19_01220	0.86	+1.3
1,271,654	+		MPMX19_01220	0.89	-0.3
1,271,654	+		MPMX19_01220	0.89	-2.0
1,271,654	+		MPMX19_01220	0.89	-0.3
1,271,655	-		MPMX19_01220	0.89	-0.6
1,271,655	-		MPMX19_01220	0.89	+0.5
1,271,655	-		MPMX19_01220	0.89	-1.1
1,271,655	-		MPMX19_01220	0.89	-0.8
1,271,655	-		MPMX19_01220	0.89	-0.3
1,271,655	-		MPMX19_01220	0.89	+0.2
1,271,696	+				-1.5
1,271,696	+				-0.2
1,271,696	+				-0.7
1,271,696	+				-1.7
1,271,696	+				+0.4
1,271,696	+				-0.2
1,271,696	+				+0.5
1,271,696	+				-0.6
1,271,696	+				-0.3
1,271,696	+				-1.0
1,271,697	-				-2.1
1,271,697	-				-0.8
1,271,697	-				-0.0
1,271,697	-				-0.8
1,271,697	-				-0.6
1,271,697	-				-0.7
1,271,771	+				-1.2
1,271,771	+				+0.2
1,271,771	+				-0.1
1,271,771	+				-0.5
1,271,771	+				-0.8
1,271,771	+				-0.4
1,271,771	+				-0.6
1,271,771	+				-0.3
1,271,771	+				+1.7
1,271,771	+				-1.1
1,271,771	+				-1.1
1,271,771	+				-0.6
1,271,771	+				+0.3
1,271,771	+				+0.3
1,271,771	+				-0.5
1,271,771	+				-0.7
1,271,771	+				-1.8
1,271,771	+				+1.2
1,271,771	+				-1.7
1,271,771	+				-0.8
1,271,771	+				-0.5
1,271,771	+				-0.5
1,271,771	+				+0.4
1,271,771	+				-1.8
1,271,771	+				-0.6
1,271,771	+				-0.6
1,271,771	+				+0.6
1,271,771	+				+0.4
1,271,771	+				-0.5
1,271,771	+				-1.9
1,271,771	+				-1.2
1,271,771	+				-0.7
1,271,771	+				+0.9
1,271,771	+				-0.6
1,271,771	+				-0.7
1,271,771	+				+0.2
1,271,771	+				-0.0
1,271,771	+				-0.9
1,271,771	+				-1.2
1,271,771	+				-0.8
1,271,771	+				-0.5
1,271,771	+				-1.3
1,271,771	+				+1.0
1,271,772	-				-1.3
1,271,772	-				+0.6
1,271,772	-				-0.9
1,271,772	-				-1.2
1,271,772	-				-0.1
1,271,772	-				-1.0
1,271,772	-				-0.4
1,271,772	-				+0.0
1,271,772	-				-1.6
1,271,772	-				-1.3
1,271,772	-				-2.6
1,271,772	-				-0.6
1,271,772	-				-0.2
1,271,772	-				+0.0
1,271,772	-				-1.0
1,271,772	-				-1.8
1,271,772	-				-0.8
1,271,772	-				-1.0
1,271,772	-				-0.3
1,271,772	-				-0.0
1,271,772	-				-0.8
1,271,772	-				-0.9
1,271,772	-				-0.0
1,271,772	-				-0.1
1,271,772	-				-0.2
1,271,772	-				+0.4
1,271,772	-				-0.8
1,271,772	-				+0.7
1,271,772	-				-0.1
1,271,772	-				+0.4
1,271,772	-				-0.3
1,271,772	-				-0.6
1,271,772	-				+0.3
1,271,772	-				-0.3
1,271,772	-				-0.3
1,271,772	-				+0.4
1,271,772	-				-2.3
1,271,772	-				-0.2
1,271,772	-				-1.2
1,271,772	-				-0.7
1,271,772	-				-0.3
1,271,772	-				+0.3
1,271,772	-				-1.5
1,271,772	-				+1.6
1,271,772	-				+0.2
1,271,772	-				-0.4
1,271,772	-				-1.0
1,271,772	-				-1.2
1,271,804	+				+0.2
1,271,804	+				-0.8
1,271,804	+				+0.3
1,271,804	+				-0.0
1,271,805	-				-1.8
1,271,805	-				-1.9
1,271,865	-				-0.2
1,271,865	-				-0.6
1,271,913	+				-1.7
1,271,913	+				+1.7
1,271,913	+				+0.8
1,271,913	+				-2.5
1,271,913	+				-0.4
1,271,913	+				+0.0
1,271,913	+				-1.5
1,271,913	+				+0.2
1,271,913	+				-1.3
1,271,913	+				-0.2
1,271,913	+				-1.1
1,271,913	+				-0.8
1,271,913	+				-0.0
1,271,913	+				-0.5
1,271,913	+				-1.5
1,271,913	+				-0.8
1,271,914	-				-0.7
1,271,914	-				-1.2
1,271,914	-				+0.2
1,271,914	-				-0.2
1,271,914	-				-0.7
1,271,914	-				-0.3
1,271,914	-				-1.9
1,271,914	-				-0.2
1,271,914	-				-1.0
1,271,914	-				-0.1
1,271,914	-				-0.5
1,271,918	+				-1.5
1,271,918	+				-0.7
1,271,918	+				+0.7
1,271,918	+				-0.3
1,271,918	+				-1.2
1,271,918	+				-1.5
1,271,918	+				+0.2
1,271,919	-				+0.1
1,271,919	-				-0.0
1,271,919	-				-1.3
1,271,919	-				+0.0
1,271,919	-				-1.5
1,272,119	+				-1.8
1,272,119	+				-0.3
1,272,120	-				-0.2
1,272,546	-				+1.1
1,272,562	-				-0.3
1,272,621	+				-0.5
1,272,851	+		MPMX19_01223	0.13	-1.4
1,272,851	+		MPMX19_01223	0.13	-1.2
1,272,851	+		MPMX19_01223	0.13	-2.0
1,272,851	+		MPMX19_01223	0.13	-0.3
1,272,851	+		MPMX19_01223	0.13	-1.7
1,272,851	+		MPMX19_01223	0.13	-0.0
1,272,851	+		MPMX19_01223	0.13	+0.3
1,272,852	-		MPMX19_01223	0.13	-0.3
1,272,852	-		MPMX19_01223	0.13	+0.4
1,272,852	-		MPMX19_01223	0.13	-0.4
1,272,852	-		MPMX19_01223	0.13	-0.2
1,272,852	-		MPMX19_01223	0.13	+0.7
1,272,852	-		MPMX19_01223	0.13	-0.8
1,272,852	-		MPMX19_01223	0.13	-0.3
1,272,852	-		MPMX19_01223	0.13	-0.8
1,272,852	-		MPMX19_01223	0.13	+0.3
1,272,852	-		MPMX19_01223	0.13	-0.8
1,272,852	-		MPMX19_01223	0.13	+0.1
1,272,852	-		MPMX19_01223	0.13	-1.0
1,272,854	+		MPMX19_01223	0.13	-0.3
1,272,854	+		MPMX19_01223	0.13	-0.2
1,272,854	+		MPMX19_01223	0.13	-0.3
1,272,854	+		MPMX19_01223	0.13	-1.5
1,272,855	-		MPMX19_01223	0.13	+0.4
1,272,855	-		MPMX19_01223	0.13	+1.8
1,272,855	-		MPMX19_01223	0.13	-0.3
1,272,855	-		MPMX19_01223	0.13	-0.3
1,272,870	+		MPMX19_01223	0.14	+0.2
1,272,870	+		MPMX19_01223	0.14	-0.2
1,272,870	+		MPMX19_01223	0.14	-0.3
1,272,870	+		MPMX19_01223	0.14	-0.6
1,272,870	+		MPMX19_01223	0.14	-0.1
1,272,871	-		MPMX19_01223	0.14	+1.3
1,272,995	+		MPMX19_01223	0.23	+1.2
1,272,995	+		MPMX19_01223	0.23	+0.2
1,272,995	+		MPMX19_01223	0.23	+0.1
1,272,996	-		MPMX19_01223	0.23	+0.7
1,272,996	-		MPMX19_01223	0.23	-0.7
1,272,996	-		MPMX19_01223	0.23	-1.9