Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01170

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,207,437	+				-0.6
1,207,437	+				+0.5
1,207,437	+				-0.5
1,207,437	+				-0.5
1,207,437	+				+0.6
1,207,437	+				-2.0
1,207,437	+				-1.2
1,207,437	+				-0.9
1,207,437	+				-0.2
1,207,437	+				-0.3
1,207,437	+				-0.6
1,207,437	+				-0.8
1,207,437	+				-0.4
1,207,437	+				-1.0
1,207,437	+				-2.3
1,207,437	+				-2.0
1,207,437	+				+1.0
1,207,437	+				+1.3
1,207,437	+				-0.9
1,207,438	-				-1.2
1,207,438	-				-0.9
1,207,438	-				-1.5
1,207,438	-				+0.1
1,207,438	-				-3.0
1,207,438	-				-1.6
1,207,438	-				-1.1
1,207,438	-				-0.0
1,207,438	-				-0.5
1,207,438	-				-0.3
1,207,438	-				-1.0
1,207,438	-				+0.8
1,207,438	-				+0.6
1,207,438	-				-1.3
1,207,438	-				-1.6
1,207,438	-				-1.3
1,207,438	-				-1.5
1,207,438	-				-0.3
1,207,438	-				-1.0
1,207,438	-				-0.5
1,207,438	-				-0.4
1,207,479	+				-0.7
1,207,479	+				+0.4
1,207,479	+				+0.0
1,207,479	+				+0.7
1,207,480	-				-0.4
1,207,480	-				-0.7
1,207,480	-				+0.6
1,207,480	-				+0.2
1,207,480	-				+0.6
1,207,480	-				+0.3
1,207,496	+				-1.3
1,207,496	+				-1.0
1,207,496	+				-1.5
1,207,497	-				-1.0
1,207,497	-				-0.9
1,207,497	-				-0.0
1,207,497	-				-0.9
1,207,497	-				-0.3
1,207,497	-				+0.2
1,207,592	+		MPMX19_01169	0.19	-0.3
1,207,592	+		MPMX19_01169	0.19	-0.6
1,207,592	+		MPMX19_01169	0.19	-0.8
1,207,592	+		MPMX19_01169	0.19	-0.0
1,207,592	+		MPMX19_01169	0.19	-1.8
1,207,592	+		MPMX19_01169	0.19	+0.6
1,207,592	+		MPMX19_01169	0.19	+0.2
1,207,592	+		MPMX19_01169	0.19	-0.2
1,207,592	+		MPMX19_01169	0.19	-0.4
1,207,592	+		MPMX19_01169	0.19	+0.4
1,207,592	+		MPMX19_01169	0.19	-0.8
1,207,592	+		MPMX19_01169	0.19	-1.7
1,207,592	+		MPMX19_01169	0.19	-2.3
1,207,592	+		MPMX19_01169	0.19	-0.1
1,207,592	+		MPMX19_01169	0.19	+0.7
1,207,592	+		MPMX19_01169	0.19	-0.8
1,207,593	-		MPMX19_01169	0.19	-0.4
1,207,593	-		MPMX19_01169	0.19	+0.6
1,207,593	-		MPMX19_01169	0.19	+1.7
1,207,593	-		MPMX19_01169	0.19	-0.7
1,207,593	-		MPMX19_01169	0.19	-1.4
1,207,593	-		MPMX19_01169	0.19	-0.2
1,207,593	-		MPMX19_01169	0.19	+1.0
1,207,593	-		MPMX19_01169	0.19	-0.8
1,207,593	-		MPMX19_01169	0.19	-1.1
1,207,593	-		MPMX19_01169	0.19	-0.8
1,207,593	-		MPMX19_01169	0.19	-0.9
1,207,593	-		MPMX19_01169	0.19	+0.2
1,207,593	-		MPMX19_01169	0.19	-1.4
1,207,593	-		MPMX19_01169	0.19	+0.9
1,207,811	+		MPMX19_01169	0.47	+0.3
1,207,811	+		MPMX19_01169	0.47	-0.5
1,207,811	+		MPMX19_01169	0.47	+0.3
1,207,812	-		MPMX19_01169	0.47	+1.2
1,207,812	-		MPMX19_01169	0.47	+0.7
1,207,812	-		MPMX19_01169	0.47	-0.5
1,207,812	-		MPMX19_01169	0.47	-0.4
1,207,812	-		MPMX19_01169	0.47	+0.7
1,207,883	+		MPMX19_01169	0.56	-0.8
1,207,883	+		MPMX19_01169	0.56	+1.3
1,207,883	+		MPMX19_01169	0.56	+0.6
1,207,883	+		MPMX19_01169	0.56	-0.5
1,207,883	+		MPMX19_01169	0.56	+1.0
1,207,883	+		MPMX19_01169	0.56	+0.8
1,207,883	+		MPMX19_01169	0.56	+2.3
1,207,883	+		MPMX19_01169	0.56	+1.1
1,207,883	+		MPMX19_01169	0.56	+0.1
1,207,883	+		MPMX19_01169	0.56	+0.4
1,207,884	-		MPMX19_01169	0.57	-0.3
1,207,884	-		MPMX19_01169	0.57	-1.1
1,207,884	-		MPMX19_01169	0.57	-0.1
1,207,884	-		MPMX19_01169	0.57	-1.0
1,207,884	-		MPMX19_01169	0.57	-0.7
1,207,884	-		MPMX19_01169	0.57	-0.2
1,207,884	-		MPMX19_01169	0.57	+1.0
1,207,884	-		MPMX19_01169	0.57	-0.4
1,207,884	-		MPMX19_01169	0.57	+0.3
1,208,146	+				+0.8
1,208,146	+				-0.3
1,208,146	+				+0.9
1,208,146	+				+0.2
1,208,146	+				-0.3
1,208,146	+				-0.0
1,208,146	+				-1.9
1,208,146	+				-1.3
1,208,147	-				+0.4
1,208,147	-				+1.0
1,208,147	-				+1.0
1,208,147	-				-1.2
1,208,147	-				-1.8
1,209,534	-				+0.8
1,209,583	-				+0.1
1,209,620	-				-0.8
1,209,620	-				-0.2
1,209,620	-				-0.5
1,209,620	-				-1.3
1,209,832	+		MPMX19_01171	0.28	-1.5
1,209,832	+		MPMX19_01171	0.28	+0.8
1,209,832	+		MPMX19_01171	0.28	-1.2
1,209,833	-		MPMX19_01171	0.28	-0.6
1,209,833	-		MPMX19_01171	0.28	-0.8
1,209,924	+		MPMX19_01171	0.41	-1.0
1,209,924	+		MPMX19_01171	0.41	-2.1
1,209,924	+		MPMX19_01171	0.41	-0.5
1,209,924	+		MPMX19_01171	0.41	-1.7
1,209,924	+		MPMX19_01171	0.41	-1.3
1,209,925	-		MPMX19_01171	0.41	-0.9
1,209,925	-		MPMX19_01171	0.41	+0.8
1,209,925	-		MPMX19_01171	0.41	+0.2
1,209,925	-		MPMX19_01171	0.41	+0.3
1,209,925	-		MPMX19_01171	0.41	-2.1
1,209,925	-		MPMX19_01171	0.41	-1.3
1,209,925	-		MPMX19_01171	0.41	-0.5
1,209,925	-		MPMX19_01171	0.41	-0.1
1,209,925	-		MPMX19_01171	0.41	+0.7
1,210,035	+		MPMX19_01171	0.57	-0.5
1,210,036	-		MPMX19_01171	0.57	+0.7
1,210,098	+		MPMX19_01171	0.66	+0.9
1,210,098	+		MPMX19_01171	0.66	-0.0
1,210,098	+		MPMX19_01171	0.66	-0.7
1,210,098	+		MPMX19_01171	0.66	-0.8
1,210,098	+		MPMX19_01171	0.66	+0.2
1,210,098	+		MPMX19_01171	0.66	-0.6
1,210,098	+		MPMX19_01171	0.66	+0.1
1,210,098	+		MPMX19_01171	0.66	-0.5
1,210,099	-		MPMX19_01171	0.66	+0.4
1,210,099	-		MPMX19_01171	0.66	-1.2
1,210,099	-		MPMX19_01171	0.66	+0.2
1,210,099	-		MPMX19_01171	0.66	+0.4
1,210,099	-		MPMX19_01171	0.66	-0.9
1,210,099	-		MPMX19_01171	0.66	+1.0
1,210,171	+		MPMX19_01171	0.76	-0.0
1,210,171	+		MPMX19_01171	0.76	-0.8
1,210,171	+		MPMX19_01171	0.76	-1.8
1,210,171	+		MPMX19_01171	0.76	+0.2
1,210,171	+		MPMX19_01171	0.76	-0.8
1,210,171	+		MPMX19_01171	0.76	-0.9
1,210,171	+		MPMX19_01171	0.76	-0.2
1,210,171	+		MPMX19_01171	0.76	-0.2
1,210,171	+		MPMX19_01171	0.76	+0.3
1,210,171	+		MPMX19_01171	0.76	-1.2
1,210,171	+		MPMX19_01171	0.76	-0.0
1,210,171	+		MPMX19_01171	0.76	-2.1
1,210,171	+		MPMX19_01171	0.76	+0.4
1,210,171	+		MPMX19_01171	0.76	+0.7
1,210,171	+		MPMX19_01171	0.76	-1.2
1,210,171	+		MPMX19_01171	0.76	-0.5
1,210,172	-		MPMX19_01171	0.77	+0.2
1,210,172	-		MPMX19_01171	0.77	-1.0
1,210,172	-		MPMX19_01171	0.77	-0.0
1,210,172	-		MPMX19_01171	0.77	+0.2
1,210,172	-		MPMX19_01171	0.77	-0.3
1,210,172	-		MPMX19_01171	0.77	-0.3
1,210,172	-		MPMX19_01171	0.77	-0.0
1,210,172	-		MPMX19_01171	0.77	+1.0
1,210,172	-		MPMX19_01171	0.77	-1.6
1,210,172	-		MPMX19_01171	0.77	-0.6
1,210,172	-		MPMX19_01171	0.77	-1.3
1,210,172	-		MPMX19_01171	0.77	-0.0
1,210,172	-		MPMX19_01171	0.77	+1.3
1,210,172	-		MPMX19_01171	0.77	-0.0
1,210,172	-		MPMX19_01171	0.77	-0.3
1,210,172	-		MPMX19_01171	0.77	+0.3
1,210,213	+		MPMX19_01171	0.83	-0.9
1,210,214	-		MPMX19_01171	0.83	+0.1
1,210,230	+		MPMX19_01171	0.85	-0.5
1,210,230	+		MPMX19_01171	0.85	-0.1
1,210,230	+		MPMX19_01171	0.85	-0.9
1,210,231	-		MPMX19_01171	0.85	-1.2
1,210,231	-		MPMX19_01171	0.85	-0.0
1,210,231	-		MPMX19_01171	0.85	-1.4
1,210,231	-		MPMX19_01171	0.85	-1.8
1,210,231	-		MPMX19_01171	0.85	+0.8
1,210,305	+				-0.7
1,210,305	+				+0.3
1,210,306	-				-1.5
1,210,306	-				+0.6
1,210,306	-				-0.5
1,210,306	-				-1.0
1,210,320	+				-0.3
1,210,320	+				-1.0
1,210,321	-				-0.6
1,210,321	-				+0.7
1,210,334	+				-0.0
1,210,368	-				-1.5
1,210,368	-				+0.3
1,210,368	-				+0.7
1,210,415	+				-1.1
1,210,415	+				+0.2
1,210,415	+				-0.8
1,210,415	+				+0.6
1,210,415	+				+0.7
1,210,415	+				-0.3
1,210,415	+				-0.8
1,210,415	+				-1.3
1,210,415	+				+1.0
1,210,415	+				-0.7
1,210,415	+				-1.2
1,210,415	+				-0.6
1,210,415	+				-0.0
1,210,415	+				+0.3
1,210,415	+				+0.4
1,210,416	-				-0.3
1,210,416	-				-2.5
1,210,416	-				-0.2
1,210,416	-				+2.4
1,210,416	-				-1.4
1,210,416	-				-0.3
1,210,416	-				-0.2
1,210,416	-				-0.6
1,210,416	-				-0.6
1,210,416	-				-2.3
1,210,416	-				-2.9
1,210,416	-				+0.4
1,210,416	-				-1.2
1,210,416	-				+0.4
1,210,457	+				-0.5
1,210,458	-				+0.1
1,210,458	-				+0.3