Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01018

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,057,250	+				-0.9
1,057,250	+				-1.6
1,057,250	+				-1.8
1,057,251	-				-0.5
1,057,251	-				+0.3
1,057,251	-				+0.2
1,057,251	-				-0.8
1,057,265	+				+0.0
1,057,265	+				+0.3
1,057,265	+				-3.1
1,057,265	+				-1.0
1,057,265	+				-0.7
1,057,265	+				-0.5
1,057,266	-				-0.1
1,057,266	-				-0.5
1,057,266	-				-0.2
1,057,266	-				-1.6
1,057,266	-				-0.2
1,057,266	-				+0.8
1,057,266	-				-0.8
1,057,266	-				+0.6
1,057,266	-				-0.6
1,057,266	-				-0.4
1,057,266	-				-1.8
1,057,269	+				-1.8
1,057,269	+				-0.5
1,057,269	+				+0.0
1,057,269	+				-0.4
1,057,269	+				+0.5
1,057,270	-				+0.8
1,057,270	-				+0.1
1,057,270	-				-1.1
1,057,270	-				-0.7
1,057,270	-				-1.5
1,057,270	-				+1.0
1,057,270	-				-0.4
1,057,280	+				+1.4
1,057,280	+				+0.2
1,057,280	+				-1.5
1,057,280	+				+1.1
1,057,281	-				-1.0
1,057,281	-				-0.9
1,057,281	-				-0.9
1,057,284	+				-1.5
1,057,284	+				+0.4
1,057,284	+				-2.2
1,057,284	+				-1.7
1,057,285	-				+0.6
1,057,285	-				-1.3
1,057,434	+				-0.5
1,057,435	-				-2.2
1,057,435	-				+0.1
1,057,435	-				-2.0
1,057,435	-				-0.3
1,058,606	+		MPMX19_01018	0.49	-2.6
1,058,606	+		MPMX19_01018	0.49	-0.5
1,058,606	+		MPMX19_01018	0.49	-0.6
1,058,607	-		MPMX19_01018	0.50	+0.8
1,058,607	-		MPMX19_01018	0.50	-1.2
1,058,786	+		MPMX19_01018	0.65	-2.5
1,058,786	+		MPMX19_01018	0.65	-1.2
1,058,786	+		MPMX19_01018	0.65	-0.8
1,058,786	+		MPMX19_01018	0.65	-0.9
1,058,786	+		MPMX19_01018	0.65	-1.0
1,058,786	+		MPMX19_01018	0.65	-1.2
1,058,786	+		MPMX19_01018	0.65	+0.4
1,058,786	+		MPMX19_01018	0.65	-0.6
1,058,786	+		MPMX19_01018	0.65	+0.2
1,058,787	-		MPMX19_01018	0.65	-0.8
1,058,787	-		MPMX19_01018	0.65	-1.0
1,058,787	-		MPMX19_01018	0.65	-0.6
1,058,787	-		MPMX19_01018	0.65	-0.6
1,058,787	-		MPMX19_01018	0.65	-0.8
1,058,787	-		MPMX19_01018	0.65	-1.7
1,058,806	+		MPMX19_01018	0.67	-0.6
1,058,806	+		MPMX19_01018	0.67	-1.2
1,058,807	-		MPMX19_01018	0.67	-1.6
1,058,807	-		MPMX19_01018	0.67	+1.0
1,058,807	-		MPMX19_01018	0.67	-1.1
1,058,807	-		MPMX19_01018	0.67	-1.7
1,058,807	-		MPMX19_01018	0.67	-1.8
1,058,807	-		MPMX19_01018	0.67	-0.6
1,058,807	-		MPMX19_01018	0.67	+0.2
1,058,807	-		MPMX19_01018	0.67	+2.0
1,058,807	-		MPMX19_01018	0.67	-0.7
1,059,044	+		MPMX19_01018	0.88	-0.9
1,059,044	+		MPMX19_01018	0.88	+0.2
1,059,045	-		MPMX19_01018	0.88	+0.4
1,059,045	-		MPMX19_01018	0.88	-0.3
1,059,045	-		MPMX19_01018	0.88	-1.5
1,059,212	-				+1.3
1,059,212	-				+0.4
1,059,228	+		MPMX19_01019	0.11	-1.0
1,059,228	+		MPMX19_01019	0.11	-1.0
1,059,228	+		MPMX19_01019	0.11	+0.0
1,059,228	+		MPMX19_01019	0.11	-1.3
1,059,228	+		MPMX19_01019	0.11	-1.2
1,059,228	+		MPMX19_01019	0.11	-0.2
1,059,228	+		MPMX19_01019	0.11	+0.2
1,059,228	+		MPMX19_01019	0.11	-1.3
1,059,228	+		MPMX19_01019	0.11	-0.8
1,059,228	+		MPMX19_01019	0.11	+0.2
1,059,228	+		MPMX19_01019	0.11	-1.0
1,059,228	+		MPMX19_01019	0.11	-0.9
1,059,228	+		MPMX19_01019	0.11	-1.7
1,059,228	+		MPMX19_01019	0.11	+0.5
1,059,228	+		MPMX19_01019	0.11	-2.5
1,059,228	+		MPMX19_01019	0.11	-0.6
1,059,228	+		MPMX19_01019	0.11	-1.8
1,059,228	+		MPMX19_01019	0.11	-1.2
1,059,228	+		MPMX19_01019	0.11	-0.5
1,059,228	+		MPMX19_01019	0.11	+0.5
1,059,228	+		MPMX19_01019	0.11	+1.2
1,059,228	+		MPMX19_01019	0.11	-0.3
1,059,228	+		MPMX19_01019	0.11	+0.4
1,059,228	+		MPMX19_01019	0.11	-1.8
1,059,228	+		MPMX19_01019	0.11	-1.1
1,059,228	+		MPMX19_01019	0.11	+0.4
1,059,228	+		MPMX19_01019	0.11	-1.1
1,059,228	+		MPMX19_01019	0.11	-0.3
1,059,228	+		MPMX19_01019	0.11	-0.3
1,059,228	+		MPMX19_01019	0.11	-0.2
1,059,228	+		MPMX19_01019	0.11	-1.8
1,059,228	+		MPMX19_01019	0.11	-0.8
1,059,228	+		MPMX19_01019	0.11	-1.0
1,059,228	+		MPMX19_01019	0.11	-1.8
1,059,228	+		MPMX19_01019	0.11	-1.1
1,059,228	+		MPMX19_01019	0.11	-1.0
1,059,228	+		MPMX19_01019	0.11	+1.3
1,059,228	+		MPMX19_01019	0.11	-1.3
1,059,229	-		MPMX19_01019	0.11	-0.8
1,059,229	-		MPMX19_01019	0.11	+0.3
1,059,229	-		MPMX19_01019	0.11	+0.4
1,059,229	-		MPMX19_01019	0.11	-1.2
1,059,229	-		MPMX19_01019	0.11	-1.0
1,059,229	-		MPMX19_01019	0.11	+2.0
1,059,229	-		MPMX19_01019	0.11	+0.0
1,059,229	-		MPMX19_01019	0.11	-0.6
1,059,229	-		MPMX19_01019	0.11	+0.4
1,059,229	-		MPMX19_01019	0.11	-0.5
1,059,229	-		MPMX19_01019	0.11	-1.6
1,059,229	-		MPMX19_01019	0.11	+0.8
1,059,229	-		MPMX19_01019	0.11	-0.9
1,059,229	-		MPMX19_01019	0.11	-2.2
1,059,229	-		MPMX19_01019	0.11	-0.6
1,059,229	-		MPMX19_01019	0.11	-2.3
1,059,229	-		MPMX19_01019	0.11	-2.3
1,059,229	-		MPMX19_01019	0.11	+0.9
1,059,229	-		MPMX19_01019	0.11	-0.8
1,059,229	-		MPMX19_01019	0.11	-1.3
1,059,229	-		MPMX19_01019	0.11	-0.7
1,059,229	-		MPMX19_01019	0.11	-2.0
1,059,229	-		MPMX19_01019	0.11	-2.0
1,059,229	-		MPMX19_01019	0.11	-0.8
1,059,229	-		MPMX19_01019	0.11	-1.9
1,059,229	-		MPMX19_01019	0.11	-0.7
1,059,229	-		MPMX19_01019	0.11	+0.4
1,059,229	-		MPMX19_01019	0.11	-1.5
1,059,229	-		MPMX19_01019	0.11	-1.2
1,059,229	-		MPMX19_01019	0.11	+1.0
1,059,229	-		MPMX19_01019	0.11	+1.8
1,059,229	-		MPMX19_01019	0.11	-0.8
1,059,229	-		MPMX19_01019	0.11	-1.6
1,059,523	+				-0.7
1,059,523	+				-0.9
1,059,523	+				-1.4
1,059,523	+				-0.7
1,059,523	+				+1.3
1,059,523	+				-0.3
1,059,523	+				-1.0
1,059,523	+				+1.0
1,059,523	+				-0.1
1,059,523	+				+0.0
1,059,523	+				-0.3
1,059,523	+				-1.8
1,059,523	+				+0.0
1,059,523	+				-1.2
1,059,524	-				-1.3
1,059,524	-				-1.2
1,059,524	-				-1.9
1,059,524	-				+1.4
1,059,524	-				-1.3
1,059,524	-				-0.3
1,059,524	-				-1.2
1,059,524	-				-2.1
1,059,524	-				-1.5
1,059,524	-				-0.1
1,059,524	-				-0.8
1,059,524	-				+0.5
1,059,524	-				+1.0
1,059,524	-				+2.0
1,059,524	-				-0.3
1,059,715	+		MPMX19_01020	0.87	-1.9
1,059,715	+		MPMX19_01020	0.87	-1.3
1,059,715	+		MPMX19_01020	0.87	-0.9
1,059,715	+		MPMX19_01020	0.87	-0.7
1,059,715	+		MPMX19_01020	0.87	-0.0
1,059,715	+		MPMX19_01020	0.87	-1.0
1,059,715	+		MPMX19_01020	0.87	-0.8
1,059,715	+		MPMX19_01020	0.87	-1.0
1,059,715	+		MPMX19_01020	0.87	-1.0
1,059,715	+		MPMX19_01020	0.87	-1.3
1,059,715	+		MPMX19_01020	0.87	-0.6
1,059,715	+		MPMX19_01020	0.87	+0.2
1,059,715	+		MPMX19_01020	0.87	-2.2
1,059,715	+		MPMX19_01020	0.87	+0.1
1,059,715	+		MPMX19_01020	0.87	+0.1
1,059,715	+		MPMX19_01020	0.87	+0.3
1,059,715	+		MPMX19_01020	0.87	+0.0
1,059,715	+		MPMX19_01020	0.87	+0.2
1,059,715	+		MPMX19_01020	0.87	-2.6
1,059,715	+		MPMX19_01020	0.87	-0.1
1,059,715	+		MPMX19_01020	0.87	-1.6
1,059,715	+		MPMX19_01020	0.87	-0.3
1,059,715	+		MPMX19_01020	0.87	-1.0
1,059,715	+		MPMX19_01020	0.87	-1.4
1,059,715	+		MPMX19_01020	0.87	-0.5
1,059,715	+		MPMX19_01020	0.87	+0.3
1,059,715	+		MPMX19_01020	0.87	-0.3
1,059,715	+		MPMX19_01020	0.87	+0.0
1,059,715	+		MPMX19_01020	0.87	-0.7
1,059,716	-		MPMX19_01020	0.87	-0.1
1,059,716	-		MPMX19_01020	0.87	-0.6
1,059,716	-		MPMX19_01020	0.87	-2.0
1,059,716	-		MPMX19_01020	0.87	+0.1
1,059,716	-		MPMX19_01020	0.87	-0.2
1,059,716	-		MPMX19_01020	0.87	-0.8
1,059,716	-		MPMX19_01020	0.87	+0.0
1,059,716	-		MPMX19_01020	0.87	-1.7
1,059,716	-		MPMX19_01020	0.87	+0.0
1,059,716	-		MPMX19_01020	0.87	-1.2
1,059,742	+				-0.5
1,059,742	+				-0.8
1,060,060	+		MPMX19_01021	0.36	-0.6
1,060,061	+		MPMX19_01021	0.36	+0.0
1,060,061	+		MPMX19_01021	0.36	-0.5
1,060,061	+		MPMX19_01021	0.36	-1.9
1,060,061	+		MPMX19_01021	0.36	+0.4
1,060,061	+		MPMX19_01021	0.36	+0.2
1,060,061	+		MPMX19_01021	0.36	-0.8
1,060,061	+		MPMX19_01021	0.36	-0.4
1,060,061	+		MPMX19_01021	0.36	-1.0
1,060,061	+		MPMX19_01021	0.36	-0.3
1,060,061	+		MPMX19_01021	0.36	-0.1
1,060,061	+		MPMX19_01021	0.36	-1.4
1,060,062	-		MPMX19_01021	0.36	-0.6
1,060,062	-		MPMX19_01021	0.36	-1.3
1,060,062	-		MPMX19_01021	0.36	-1.3
1,060,062	-		MPMX19_01021	0.36	-0.1
1,060,062	-		MPMX19_01021	0.36	-1.7
1,060,062	-		MPMX19_01021	0.36	-0.7
1,060,062	-		MPMX19_01021	0.36	-1.0
1,060,062	-		MPMX19_01021	0.36	+0.1
1,060,062	-		MPMX19_01021	0.36	-0.3
1,060,062	-		MPMX19_01021	0.36	+0.2
1,060,062	-		MPMX19_01021	0.36	+0.8
1,060,062	-		MPMX19_01021	0.36	+0.4
1,060,062	-		MPMX19_01021	0.36	+1.4
1,060,062	-		MPMX19_01021	0.36	-1.3
1,060,175	+		MPMX19_01021	0.50	-0.1
1,060,175	+		MPMX19_01021	0.50	-0.9
1,060,175	+		MPMX19_01021	0.50	-0.2
1,060,175	+		MPMX19_01021	0.50	-2.7
1,060,175	+		MPMX19_01021	0.50	-1.2
1,060,175	+		MPMX19_01021	0.50	-1.1
1,060,175	+		MPMX19_01021	0.50	-1.0
1,060,175	+		MPMX19_01021	0.50	-1.0
1,060,175	+		MPMX19_01021	0.50	-0.1
1,060,175	+		MPMX19_01021	0.50	-0.6
1,060,175	+		MPMX19_01021	0.50	-0.5
1,060,175	+		MPMX19_01021	0.50	-0.0
1,060,175	+		MPMX19_01021	0.50	-1.9
1,060,175	+		MPMX19_01021	0.50	-0.2
1,060,175	+		MPMX19_01021	0.50	-1.5
1,060,175	+		MPMX19_01021	0.50	+0.0
1,060,175	+		MPMX19_01021	0.50	-0.3
1,060,176	-		MPMX19_01021	0.50	-0.6
1,060,176	-		MPMX19_01021	0.50	+0.8
1,060,176	-		MPMX19_01021	0.50	-2.1
1,060,176	-		MPMX19_01021	0.50	-0.8
1,060,176	-		MPMX19_01021	0.50	-1.2
1,060,176	-		MPMX19_01021	0.50	-0.1
1,060,176	-		MPMX19_01021	0.50	-0.3
1,060,176	-		MPMX19_01021	0.50	-2.3
1,060,176	-		MPMX19_01021	0.50	-2.2
1,060,176	-		MPMX19_01021	0.50	-1.0