Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00984

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,023,377	-				-1.1
1,023,377	-				-0.6
1,023,377	-				+0.0
1,023,377	-				-2.1
1,023,490	-				+0.3
1,023,490	-				-0.3
1,023,490	-				+0.4
1,023,490	-				-1.2
1,023,490	-				+0.2
1,023,490	-				-1.8
1,023,490	-				-0.6
1,023,490	-				-1.0
1,023,490	-				-1.2
1,023,492	-				-2.3
1,023,492	-				-0.7
1,023,492	-				-1.5
1,023,492	-				-0.8
1,023,492	-				-1.9
1,023,492	-				-0.3
1,023,628	+				-1.6
1,023,628	+				-1.3
1,023,628	+				+0.6
1,023,628	+				+0.7
1,023,628	+				-1.2
1,023,628	+				-0.5
1,023,628	+				-1.7
1,023,628	+				-1.3
1,023,629	-				+0.5
1,023,629	-				-0.6
1,023,629	-				-1.0
1,023,629	-				-0.4
1,023,629	-				+0.5
1,023,629	-				-0.2
1,023,629	-				-0.5
1,023,629	-				-0.8
1,023,629	-				-0.7
1,023,629	-				-1.1
1,023,629	-				+0.5
1,023,629	-				-0.3
1,023,629	-				-0.3
1,024,012	+		MPMX19_00984	0.59	+0.1
1,024,012	+		MPMX19_00984	0.59	-0.3
1,024,012	+		MPMX19_00984	0.59	-0.3
1,024,012	+		MPMX19_00984	0.59	+0.0
1,024,013	-		MPMX19_00984	0.60	-0.4
1,024,013	-		MPMX19_00984	0.60	-1.5
1,024,013	-		MPMX19_00984	0.60	-1.2
1,024,013	-		MPMX19_00984	0.60	-1.7
1,024,042	+		MPMX19_00984	0.63	-0.4
1,024,042	+		MPMX19_00984	0.63	+0.1
1,024,042	+		MPMX19_00984	0.63	+0.0
1,024,042	+		MPMX19_00984	0.63	-1.2
1,024,042	+		MPMX19_00984	0.63	-0.5
1,024,042	+		MPMX19_00984	0.63	+0.0
1,024,042	+		MPMX19_00984	0.63	-0.0
1,024,042	+		MPMX19_00984	0.63	-1.1
1,024,042	+		MPMX19_00984	0.63	-0.5
1,024,042	+		MPMX19_00984	0.63	+0.5
1,024,042	+		MPMX19_00984	0.63	-1.3
1,024,043	-		MPMX19_00984	0.64	-1.3
1,024,043	-		MPMX19_00984	0.64	-1.0
1,024,043	-		MPMX19_00984	0.64	+0.1
1,024,043	-		MPMX19_00984	0.64	-0.2
1,024,433	+				+0.0
1,024,433	+				-1.5
1,024,433	+				+1.0
1,024,433	+				-0.3
1,024,433	+				-0.2
1,024,433	+				-0.3
1,024,433	+				+0.0
1,024,433	+				+2.1
1,024,433	+				-0.6
1,024,433	+				+0.0
1,024,433	+				+0.2
1,024,433	+				+1.5
1,024,433	+				-0.5
1,024,433	+				+0.1
1,024,433	+				-0.2
1,024,433	+				+0.0
1,024,433	+				+0.7
1,024,433	+				-0.9
1,024,433	+				+0.2
1,024,433	+				-0.6
1,024,434	-				+0.0
1,024,434	-				+2.0
1,024,434	-				-1.7
1,024,434	-				-1.8
1,024,434	-				-1.5
1,024,434	-				+0.4
1,024,434	-				-1.0
1,024,434	-				-1.8
1,024,434	-				-0.3
1,024,434	-				-2.1
1,024,434	-				-0.9
1,024,434	-				-1.6
1,024,434	-				-1.3
1,024,434	-				+0.2
1,024,434	-				+0.2
1,024,434	-				-2.2
1,024,434	-				-0.3
1,024,434	-				+0.2
1,024,434	-				-0.7
1,024,434	-				+0.3
1,024,434	-				+0.3
1,024,511	+		MPMX19_00985	0.14	+0.4
1,024,511	+		MPMX19_00985	0.14	-0.8
1,024,511	+		MPMX19_00985	0.14	-0.7
1,024,511	+		MPMX19_00985	0.14	-0.3
1,024,511	+		MPMX19_00985	0.14	-1.3
1,024,512	-		MPMX19_00985	0.14	-1.0
1,024,512	-		MPMX19_00985	0.14	-1.2
1,024,512	-		MPMX19_00985	0.14	-1.5
1,024,512	-		MPMX19_00985	0.14	+0.3
1,024,568	+		MPMX19_00985	0.19	-1.1
1,024,568	+		MPMX19_00985	0.19	+0.8
1,024,568	+		MPMX19_00985	0.19	+0.0
1,024,568	+		MPMX19_00985	0.19	+0.4
1,024,569	-		MPMX19_00985	0.19	-2.2
1,024,569	-		MPMX19_00985	0.19	+0.7
1,024,583	+		MPMX19_00985	0.20	-0.8
1,024,583	+		MPMX19_00985	0.20	+0.1
1,024,583	+		MPMX19_00985	0.20	+0.3
1,024,584	-		MPMX19_00985	0.20	+0.1
1,024,584	-		MPMX19_00985	0.20	-0.9
1,024,584	-		MPMX19_00985	0.20	-1.7
1,024,584	-		MPMX19_00985	0.20	-0.5
1,024,584	-		MPMX19_00985	0.20	-1.2
1,024,584	-		MPMX19_00985	0.20	-1.8
1,024,640	+		MPMX19_00985	0.24	-0.4
1,024,641	-		MPMX19_00985	0.24	+1.0
1,024,887	-		MPMX19_00985	0.44	-1.2
1,024,887	-		MPMX19_00985	0.44	-0.8
1,024,887	-		MPMX19_00985	0.44	+1.0
1,024,919	+		MPMX19_00985	0.46	-2.0
1,024,919	+		MPMX19_00985	0.46	-0.7
1,024,920	-		MPMX19_00985	0.46	+0.0
1,024,962	-		MPMX19_00985	0.49	-1.0
1,024,962	-		MPMX19_00985	0.49	-1.3
1,024,973	+		MPMX19_00985	0.50	-0.2
1,024,973	+		MPMX19_00985	0.50	-0.3
1,024,973	+		MPMX19_00985	0.50	-1.6
1,024,974	-		MPMX19_00985	0.50	-1.7
1,024,974	-		MPMX19_00985	0.50	-1.0
1,025,193	-		MPMX19_00985	0.67	-0.8
1,025,201	+		MPMX19_00985	0.68	-0.5
1,025,201	+		MPMX19_00985	0.68	-0.9
1,025,202	-		MPMX19_00985	0.68	-0.6
1,025,209	-		MPMX19_00985	0.69	-0.6
1,025,209	-		MPMX19_00985	0.69	+1.0
1,025,209	-		MPMX19_00985	0.69	-0.5
1,025,210	+		MPMX19_00985	0.69	-0.4
1,025,210	+		MPMX19_00985	0.69	+0.0
1,025,210	+		MPMX19_00985	0.69	-1.7
1,025,210	+		MPMX19_00985	0.69	-0.1
1,025,210	+		MPMX19_00985	0.69	-1.2
1,025,211	-		MPMX19_00985	0.69	-1.5
1,025,211	-		MPMX19_00985	0.69	-1.2
1,025,211	-		MPMX19_00985	0.69	-0.3
1,025,211	-		MPMX19_00985	0.69	+0.7
1,025,211	-		MPMX19_00985	0.69	-0.6
1,025,211	-		MPMX19_00985	0.69	-1.3
1,025,303	+		MPMX19_00985	0.76	-0.7
1,025,303	+		MPMX19_00985	0.76	+0.1
1,025,303	+		MPMX19_00985	0.76	+1.0
1,025,303	+		MPMX19_00985	0.76	-0.8
1,025,303	+		MPMX19_00985	0.76	-1.3
1,025,303	+		MPMX19_00985	0.76	+0.0
1,025,303	+		MPMX19_00985	0.76	-1.8
1,025,303	+		MPMX19_00985	0.76	+1.0
1,025,303	+		MPMX19_00985	0.76	-0.2
1,025,303	+		MPMX19_00985	0.76	-1.0
1,025,303	+		MPMX19_00985	0.76	-0.8
1,025,303	+		MPMX19_00985	0.76	-0.9
1,025,303	+		MPMX19_00985	0.76	-0.5
1,025,304	-		MPMX19_00985	0.76	-0.7
1,025,304	-		MPMX19_00985	0.76	-0.8
1,025,304	-		MPMX19_00985	0.76	-1.5
1,025,304	-		MPMX19_00985	0.76	-1.3
1,025,304	-		MPMX19_00985	0.76	-0.1
1,025,304	-		MPMX19_00985	0.76	+1.3
1,025,304	-		MPMX19_00985	0.76	-1.0