Experiment: NL-CCM, start OD=0.3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00757 and MPMX19_00758 are separated by 365 nucleotides MPMX19_00758 and MPMX19_00759 are separated by 91 nucleotides MPMX19_00759 and MPMX19_00760 are separated by 116 nucleotides
MPMX19_00757: MPMX19_00757 - Carbamoyl-phosphate synthase small chain, at 772,148 to 773,320
_00757
MPMX19_00758: MPMX19_00758 - putative protein YqeY, at 773,686 to 774,150
_00758
MPMX19_00759: MPMX19_00759 - hypothetical protein, at 774,242 to 774,838
_00759
MPMX19_00760: MPMX19_00760 - DNA primase, at 774,955 to 776,862
_00760
Position (kb) 774
775 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 773.413 kb on - strand at 773.491 kb on - strand at 773.491 kb on - strand at 773.491 kb on - strand at 773.491 kb on - strand at 773.491 kb on - strand at 773.491 kb on - strand at 773.491 kb on - strand at 773.491 kb on - strand at 773.491 kb on - strand at 773.491 kb on - strand at 773.491 kb on - strand at 773.491 kb on - strand at 773.491 kb on - strand at 773.491 kb on - strand at 773.491 kb on - strand at 773.491 kb on - strand at 773.491 kb on - strand at 773.491 kb on - strand at 773.491 kb on - strand at 773.491 kb on - strand at 773.491 kb on - strand at 773.491 kb on - strand at 773.491 kb on - strand at 773.491 kb on - strand at 773.491 kb on - strand at 773.491 kb on - strand at 773.493 kb on - strand at 773.493 kb on - strand at 773.493 kb on - strand at 773.493 kb on - strand at 773.493 kb on - strand at 773.493 kb on - strand at 773.493 kb on - strand at 773.523 kb on - strand at 773.523 kb on - strand at 773.523 kb on - strand at 773.523 kb on - strand at 773.523 kb on - strand at 773.523 kb on - strand at 773.523 kb on - strand at 773.523 kb on - strand at 773.523 kb on - strand at 773.523 kb on - strand at 773.523 kb on - strand at 773.523 kb on - strand at 773.523 kb on - strand at 773.523 kb on - strand at 773.523 kb on - strand at 773.523 kb on - strand at 773.523 kb on - strand at 773.523 kb on - strand at 773.523 kb on - strand at 773.627 kb on + strand at 773.627 kb on + strand at 773.627 kb on + strand at 773.628 kb on - strand at 773.653 kb on + strand at 773.653 kb on + strand at 773.653 kb on + strand at 773.654 kb on - strand at 773.654 kb on - strand at 773.899 kb on + strand, within MPMX19_00758 at 773.899 kb on + strand, within MPMX19_00758 at 773.899 kb on + strand, within MPMX19_00758 at 773.899 kb on + strand, within MPMX19_00758 at 773.899 kb on + strand, within MPMX19_00758 at 773.899 kb on + strand, within MPMX19_00758 at 773.899 kb on + strand, within MPMX19_00758 at 773.899 kb on + strand, within MPMX19_00758 at 773.899 kb on + strand, within MPMX19_00758 at 773.900 kb on - strand, within MPMX19_00758 at 773.900 kb on - strand, within MPMX19_00758 at 773.900 kb on - strand, within MPMX19_00758 at 773.900 kb on - strand, within MPMX19_00758 at 773.900 kb on - strand, within MPMX19_00758 at 773.900 kb on - strand, within MPMX19_00758 at 773.900 kb on - strand, within MPMX19_00758 at 773.900 kb on - strand, within MPMX19_00758 at 773.900 kb on - strand, within MPMX19_00758 at 773.900 kb on - strand, within MPMX19_00758 at 773.900 kb on - strand, within MPMX19_00758 at 773.965 kb on + strand, within MPMX19_00758 at 773.965 kb on + strand, within MPMX19_00758 at 773.965 kb on + strand, within MPMX19_00758 at 773.965 kb on + strand, within MPMX19_00758 at 773.965 kb on + strand, within MPMX19_00758 at 773.965 kb on + strand, within MPMX19_00758 at 773.965 kb on + strand, within MPMX19_00758 at 773.965 kb on + strand, within MPMX19_00758 at 773.965 kb on + strand, within MPMX19_00758 at 773.966 kb on - strand, within MPMX19_00758 at 773.966 kb on - strand, within MPMX19_00758 at 773.966 kb on - strand, within MPMX19_00758 at 773.966 kb on - strand, within MPMX19_00758 at 773.966 kb on - strand, within MPMX19_00758 at 773.966 kb on - strand, within MPMX19_00758 at 774.148 kb on + strand at 774.148 kb on + strand at 774.148 kb on + strand at 774.148 kb on + strand at 774.148 kb on + strand at 774.148 kb on + strand at 774.148 kb on + strand at 774.148 kb on + strand at 774.148 kb on + strand at 774.148 kb on + strand at 774.148 kb on + strand at 774.148 kb on + strand at 774.148 kb on + strand at 774.148 kb on + strand at 774.148 kb on + strand at 774.148 kb on + strand at 774.148 kb on + strand at 774.148 kb on + strand at 774.148 kb on + strand at 774.148 kb on + strand at 774.148 kb on + strand at 774.148 kb on + strand at 774.148 kb on + strand at 774.148 kb on + strand at 774.149 kb on - strand at 774.149 kb on - strand at 774.149 kb on - strand at 774.149 kb on - strand at 774.149 kb on - strand at 774.149 kb on - strand at 774.149 kb on - strand at 774.149 kb on - strand at 774.149 kb on - strand at 774.149 kb on - strand at 774.149 kb on - strand at 774.149 kb on - strand at 774.149 kb on - strand at 774.149 kb on - strand at 774.149 kb on - strand at 774.149 kb on - strand at 774.149 kb on - strand at 774.149 kb on - strand at 774.149 kb on - strand at 774.149 kb on - strand at 774.149 kb on - strand at 774.327 kb on - strand, within MPMX19_00759 at 774.399 kb on + strand, within MPMX19_00759 at 774.399 kb on + strand, within MPMX19_00759 at 774.399 kb on + strand, within MPMX19_00759 at 774.399 kb on + strand, within MPMX19_00759 at 774.399 kb on + strand, within MPMX19_00759 at 774.399 kb on + strand, within MPMX19_00759 at 774.399 kb on + strand, within MPMX19_00759 at 774.400 kb on - strand, within MPMX19_00759 at 774.400 kb on - strand, within MPMX19_00759 at 774.400 kb on - strand, within MPMX19_00759 at 774.400 kb on - strand, within MPMX19_00759 at 774.400 kb on - strand, within MPMX19_00759 at 774.400 kb on - strand, within MPMX19_00759 at 774.400 kb on - strand, within MPMX19_00759 at 774.400 kb on - strand, within MPMX19_00759 at 774.400 kb on - strand, within MPMX19_00759 at 774.449 kb on - strand, within MPMX19_00759 at 774.468 kb on + strand, within MPMX19_00759 at 774.468 kb on + strand, within MPMX19_00759 at 774.468 kb on + strand, within MPMX19_00759 at 774.469 kb on - strand, within MPMX19_00759 at 774.469 kb on - strand, within MPMX19_00759 at 774.469 kb on - strand, within MPMX19_00759 at 774.469 kb on - strand, within MPMX19_00759 at 774.629 kb on + strand, within MPMX19_00759 at 774.629 kb on + strand, within MPMX19_00759 at 774.629 kb on + strand, within MPMX19_00759 at 774.629 kb on + strand, within MPMX19_00759 at 774.629 kb on + strand, within MPMX19_00759 at 774.629 kb on + strand, within MPMX19_00759 at 774.629 kb on + strand, within MPMX19_00759 at 774.629 kb on + strand, within MPMX19_00759 at 774.629 kb on + strand, within MPMX19_00759 at 774.629 kb on + strand, within MPMX19_00759 at 774.629 kb on + strand, within MPMX19_00759 at 774.630 kb on - strand, within MPMX19_00759 at 774.630 kb on - strand, within MPMX19_00759 at 774.630 kb on - strand, within MPMX19_00759 at 774.630 kb on - strand, within MPMX19_00759 at 774.630 kb on - strand, within MPMX19_00759 at 774.630 kb on - strand, within MPMX19_00759 at 774.630 kb on - strand, within MPMX19_00759 at 774.630 kb on - strand, within MPMX19_00759 at 774.630 kb on - strand, within MPMX19_00759 at 774.630 kb on - strand, within MPMX19_00759 at 774.630 kb on - strand, within MPMX19_00759 at 774.640 kb on - strand, within MPMX19_00759 at 774.640 kb on - strand, within MPMX19_00759 at 774.779 kb on + strand at 774.779 kb on + strand at 774.779 kb on + strand at 774.780 kb on - strand at 774.780 kb on - strand at 774.780 kb on - strand at 774.780 kb on - strand at 774.780 kb on - strand at 774.796 kb on + strand at 774.796 kb on + strand at 774.796 kb on + strand at 774.796 kb on + strand at 774.796 kb on + strand at 774.796 kb on + strand at 774.796 kb on + strand at 774.796 kb on + strand at 774.796 kb on + strand at 774.796 kb on + strand at 774.796 kb on + strand at 774.796 kb on + strand at 774.796 kb on + strand at 774.796 kb on + strand at 774.796 kb on + strand at 774.796 kb on + strand at 774.796 kb on + strand at 774.796 kb on + strand at 774.797 kb on - strand at 774.797 kb on - strand at 774.797 kb on - strand at 774.797 kb on - strand at 774.797 kb on - strand at 774.797 kb on - strand at 774.797 kb on - strand at 774.797 kb on - strand at 774.797 kb on - strand at 774.797 kb on - strand at 774.797 kb on - strand at 774.797 kb on - strand at 774.797 kb on - strand at 774.797 kb on - strand at 774.803 kb on + strand at 774.803 kb on + strand at 774.803 kb on + strand at 774.803 kb on + strand at 774.803 kb on + strand at 774.803 kb on + strand at 774.803 kb on + strand at 774.803 kb on + strand at 774.803 kb on + strand at 774.803 kb on + strand at 774.803 kb on + strand at 774.803 kb on + strand at 774.803 kb on + strand at 774.803 kb on + strand at 774.803 kb on + strand at 774.803 kb on + strand at 774.803 kb on + strand at 774.804 kb on - strand at 774.804 kb on - strand at 774.804 kb on - strand at 774.804 kb on - strand at 774.804 kb on - strand at 774.804 kb on - strand at 774.804 kb on - strand at 774.804 kb on - strand at 774.804 kb on - strand at 774.804 kb on - strand at 774.882 kb on + strand at 774.882 kb on + strand at 774.882 kb on + strand at 774.882 kb on + strand at 774.882 kb on + strand at 774.882 kb on + strand at 774.882 kb on + strand at 774.882 kb on + strand at 774.882 kb on + strand at 774.882 kb on + strand at 774.882 kb on + strand at 774.882 kb on + strand at 774.882 kb on + strand at 774.882 kb on + strand at 774.882 kb on + strand at 774.882 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.885 kb on + strand at 774.896 kb on + strand at 774.896 kb on + strand at 774.896 kb on + strand at 774.896 kb on + strand at 774.896 kb on + strand at 774.896 kb on + strand at 774.896 kb on + strand at 774.896 kb on + strand at 774.896 kb on + strand at 774.896 kb on + strand at 774.896 kb on + strand at 774.896 kb on + strand at 774.896 kb on + strand at 774.896 kb on + strand at 774.896 kb on + strand at 774.896 kb on + strand at 774.896 kb on + strand at 774.898 kb on + strand at 774.898 kb on + strand at 774.898 kb on + strand at 774.898 kb on + strand at 774.898 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.3 remove 773,413 - +0.3 773,491 - -0.5 773,491 - +0.1 773,491 - -0.6 773,491 - -0.4 773,491 - -1.0 773,491 - -0.6 773,491 - -1.1 773,491 - -1.4 773,491 - -1.1 773,491 - +0.6 773,491 - -1.1 773,491 - +0.5 773,491 - -1.4 773,491 - -0.8 773,491 - -0.5 773,491 - -0.4 773,491 - +0.4 773,491 - -0.7 773,491 - -0.1 773,491 - -1.4 773,491 - +0.6 773,491 - +2.0 773,491 - -1.8 773,491 - +0.4 773,491 - -1.7 773,491 - -1.3 773,493 - -0.2 773,493 - -0.4 773,493 - -0.1 773,493 - -1.1 773,493 - +0.0 773,493 - -1.8 773,493 - -1.2 773,523 - +1.0 773,523 - -0.4 773,523 - +0.1 773,523 - -1.8 773,523 - -1.4 773,523 - +0.4 773,523 - -0.8 773,523 - -3.5 773,523 - -1.4 773,523 - -1.3 773,523 - -0.5 773,523 - -1.1 773,523 - -0.4 773,523 - -1.6 773,523 - -0.9 773,523 - +0.4 773,523 - -1.8 773,523 - +0.4 773,523 - +0.0 773,627 + -0.5 773,627 + +1.8 773,627 + +0.5 773,628 - -1.2 773,653 + +0.7 773,653 + -1.3 773,653 + -0.4 773,654 - -1.1 773,654 - +0.2 773,899 + MPMX19_00758 0.46 -0.1 773,899 + MPMX19_00758 0.46 -0.1 773,899 + MPMX19_00758 0.46 -1.2 773,899 + MPMX19_00758 0.46 -0.0 773,899 + MPMX19_00758 0.46 +0.9 773,899 + MPMX19_00758 0.46 +0.3 773,899 + MPMX19_00758 0.46 -0.6 773,899 + MPMX19_00758 0.46 +0.1 773,899 + MPMX19_00758 0.46 -1.7 773,900 - MPMX19_00758 0.46 -1.5 773,900 - MPMX19_00758 0.46 -1.1 773,900 - MPMX19_00758 0.46 +0.0 773,900 - MPMX19_00758 0.46 +1.1 773,900 - MPMX19_00758 0.46 +0.9 773,900 - MPMX19_00758 0.46 -0.4 773,900 - MPMX19_00758 0.46 -0.6 773,900 - MPMX19_00758 0.46 -1.8 773,900 - MPMX19_00758 0.46 +1.1 773,900 - MPMX19_00758 0.46 +0.0 773,900 - MPMX19_00758 0.46 -1.7 773,965 + MPMX19_00758 0.60 -1.4 773,965 + MPMX19_00758 0.60 -0.3 773,965 + MPMX19_00758 0.60 -0.1 773,965 + MPMX19_00758 0.60 -1.0 773,965 + MPMX19_00758 0.60 +1.4 773,965 + MPMX19_00758 0.60 +0.0 773,965 + MPMX19_00758 0.60 -2.1 773,965 + MPMX19_00758 0.60 +0.1 773,965 + MPMX19_00758 0.60 -1.1 773,966 - MPMX19_00758 0.60 -1.0 773,966 - MPMX19_00758 0.60 -0.7 773,966 - MPMX19_00758 0.60 -0.4 773,966 - MPMX19_00758 0.60 +0.0 773,966 - MPMX19_00758 0.60 -3.0 773,966 - MPMX19_00758 0.60 -0.4 774,148 + +0.2 774,148 + -1.8 774,148 + +0.0 774,148 + +0.6 774,148 + -0.2 774,148 + -0.8 774,148 + -1.0 774,148 + +0.4 774,148 + -0.8 774,148 + -0.2 774,148 + -0.8 774,148 + +1.2 774,148 + +0.4 774,148 + -1.5 774,148 + +0.4 774,148 + +0.0 774,148 + -0.0 774,148 + -0.2 774,148 + -1.4 774,148 + -0.8 774,148 + -1.1 774,148 + -1.4 774,148 + -1.7 774,148 + +0.1 774,149 - -1.9 774,149 - -1.0 774,149 - +0.4 774,149 - -1.7 774,149 - +0.8 774,149 - -1.2 774,149 - -1.3 774,149 - +1.4 774,149 - -0.8 774,149 - +0.0 774,149 - -0.1 774,149 - -1.0 774,149 - -0.3 774,149 - -1.0 774,149 - -1.3 774,149 - +0.1 774,149 - +0.4 774,149 - +0.4 774,149 - +0.0 774,149 - -0.7 774,149 - +0.6 774,327 - MPMX19_00759 0.14 -0.5 774,399 + MPMX19_00759 0.26 -0.2 774,399 + MPMX19_00759 0.26 +0.3 774,399 + MPMX19_00759 0.26 +0.8 774,399 + MPMX19_00759 0.26 -0.6 774,399 + MPMX19_00759 0.26 -0.1 774,399 + MPMX19_00759 0.26 -1.2 774,399 + MPMX19_00759 0.26 -1.3 774,400 - MPMX19_00759 0.26 -0.4 774,400 - MPMX19_00759 0.26 -0.8 774,400 - MPMX19_00759 0.26 -0.8 774,400 - MPMX19_00759 0.26 -1.3 774,400 - MPMX19_00759 0.26 -0.6 774,400 - MPMX19_00759 0.26 -0.8 774,400 - MPMX19_00759 0.26 -0.3 774,400 - MPMX19_00759 0.26 -0.2 774,400 - MPMX19_00759 0.26 +1.8 774,449 - MPMX19_00759 0.35 -1.1 774,468 + MPMX19_00759 0.38 +0.3 774,468 + MPMX19_00759 0.38 +0.0 774,468 + MPMX19_00759 0.38 +0.6 774,469 - MPMX19_00759 0.38 +0.3 774,469 - MPMX19_00759 0.38 +1.0 774,469 - MPMX19_00759 0.38 +1.4 774,469 - MPMX19_00759 0.38 -0.5 774,629 + MPMX19_00759 0.65 -3.3 774,629 + MPMX19_00759 0.65 -1.4 774,629 + MPMX19_00759 0.65 +0.9 774,629 + MPMX19_00759 0.65 -3.1 774,629 + MPMX19_00759 0.65 -0.6 774,629 + MPMX19_00759 0.65 -2.1 774,629 + MPMX19_00759 0.65 +0.2 774,629 + MPMX19_00759 0.65 -0.8 774,629 + MPMX19_00759 0.65 -1.3 774,629 + MPMX19_00759 0.65 -0.6 774,629 + MPMX19_00759 0.65 -0.1 774,630 - MPMX19_00759 0.65 -0.4 774,630 - MPMX19_00759 0.65 +0.0 774,630 - MPMX19_00759 0.65 -0.3 774,630 - MPMX19_00759 0.65 -0.2 774,630 - MPMX19_00759 0.65 -1.0 774,630 - MPMX19_00759 0.65 -0.8 774,630 - MPMX19_00759 0.65 -0.7 774,630 - MPMX19_00759 0.65 -0.1 774,630 - MPMX19_00759 0.65 -0.0 774,630 - MPMX19_00759 0.65 +0.4 774,630 - MPMX19_00759 0.65 -0.3 774,640 - MPMX19_00759 0.67 +0.4 774,640 - MPMX19_00759 0.67 -1.6 774,779 + -0.9 774,779 + +1.1 774,779 + -1.8 774,780 - -1.3 774,780 - -1.3 774,780 - -2.1 774,780 - 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Or see this region's nucleotide sequence