Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00701

Experiment: NL-CCM, start OD=0.3

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_00699 and MPMX19_00700 are separated by 73 nucleotidesMPMX19_00700 and MPMX19_00701 are separated by 3 nucleotidesMPMX19_00701 and MPMX19_00702 are separated by 16 nucleotides MPMX19_00699: MPMX19_00699 - Acyl-CoA thioesterase YbgC, at 720,633 to 721,121 _00699 MPMX19_00700: MPMX19_00700 - Tol-Pal system protein TolQ, at 721,195 to 721,929 _00700 MPMX19_00701: MPMX19_00701 - Tol-Pal system protein TolR, at 721,933 to 722,415 _00701 MPMX19_00702: MPMX19_00702 - hypothetical protein, at 722,432 to 723,655 _00702 Position (kb) 721 722 723Strain fitness (log2 ratio) -1 0 1at 721.027 kb on + strand, within MPMX19_00699at 721.138 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.3
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721,027 + MPMX19_00699 0.81 +0.0
721,138 + +1.3

Or see this region's nucleotide sequence