Experiment: NL-CCM, start OD=0.3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00667 and MPMX19_00668 are separated by 108 nucleotides MPMX19_00668 and MPMX19_00669 are separated by 417 nucleotides MPMX19_00669 and MPMX19_00670 are separated by 54 nucleotides
MPMX19_00667: MPMX19_00667 - Single-stranded-DNA-specific exonuclease RecJ, at 689,169 to 690,965
_00667
MPMX19_00668: MPMX19_00668 - tRNA-Glu, at 691,074 to 691,149
_00668
MPMX19_00669: MPMX19_00669 - hypothetical protein, at 691,567 to 691,851
_00669
MPMX19_00670: MPMX19_00670 - tRNA-dihydrouridine(20/20a) synthase, at 691,906 to 692,931
_00670
Position (kb) 691
692 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 690.983 kb on + strand at 691.004 kb on - strand at 691.168 kb on + strand at 691.168 kb on + strand at 691.168 kb on + strand at 691.168 kb on + strand at 691.168 kb on + strand at 691.287 kb on + strand at 691.333 kb on + strand at 691.334 kb on - strand at 691.334 kb on - strand at 691.366 kb on + strand at 691.366 kb on + strand at 691.423 kb on + strand at 691.432 kb on + strand at 691.432 kb on + strand at 691.432 kb on + strand at 691.432 kb on + strand at 691.432 kb on + strand at 691.433 kb on - strand at 691.433 kb on - strand at 691.433 kb on - strand at 691.433 kb on - strand at 691.537 kb on + strand at 691.537 kb on + strand at 691.537 kb on + strand at 691.537 kb on + strand at 691.537 kb on + strand at 691.537 kb on + strand at 691.538 kb on - strand at 691.538 kb on - strand at 691.538 kb on - strand at 691.538 kb on - strand at 691.636 kb on + strand, within MPMX19_00669 at 691.636 kb on + strand, within MPMX19_00669 at 691.636 kb on + strand, within MPMX19_00669 at 691.636 kb on + strand, within MPMX19_00669 at 691.636 kb on + strand, within MPMX19_00669 at 691.637 kb on - strand, within MPMX19_00669 at 691.637 kb on - strand, within MPMX19_00669 at 691.637 kb on - strand, within MPMX19_00669 at 691.637 kb on - strand, within MPMX19_00669 at 691.637 kb on - strand, within MPMX19_00669 at 691.731 kb on + strand, within MPMX19_00669 at 691.759 kb on + strand, within MPMX19_00669 at 691.759 kb on + strand, within MPMX19_00669 at 691.759 kb on + strand, within MPMX19_00669 at 691.759 kb on + strand, within MPMX19_00669 at 691.759 kb on + strand, within MPMX19_00669 at 691.759 kb on + strand, within MPMX19_00669 at 691.759 kb on + strand, within MPMX19_00669 at 691.759 kb on + strand, within MPMX19_00669 at 691.759 kb on + strand, within MPMX19_00669 at 691.759 kb on + strand, within MPMX19_00669 at 691.759 kb on + strand, within MPMX19_00669 at 691.759 kb on + strand, within MPMX19_00669 at 691.759 kb on + strand, within MPMX19_00669 at 691.760 kb on - strand, within MPMX19_00669 at 691.760 kb on - strand, within MPMX19_00669 at 691.760 kb on - strand, within MPMX19_00669 at 691.760 kb on - strand, within MPMX19_00669 at 691.760 kb on - strand, within MPMX19_00669 at 691.760 kb on - strand, within MPMX19_00669 at 691.760 kb on - strand, within MPMX19_00669 at 691.760 kb on - strand, within MPMX19_00669 at 691.760 kb on - strand, within MPMX19_00669 at 691.760 kb on - strand, within MPMX19_00669 at 691.760 kb on - strand, within MPMX19_00669 at 691.760 kb on - strand, within MPMX19_00669 at 691.760 kb on - strand, within MPMX19_00669 at 691.760 kb on - strand, within MPMX19_00669 at 691.760 kb on - strand, within MPMX19_00669 at 691.869 kb on - strand at 691.869 kb on - strand at 691.869 kb on - strand at 691.889 kb on + strand at 691.889 kb on + strand at 691.889 kb on + strand at 691.972 kb on + strand at 691.972 kb on + strand at 691.972 kb on + strand at 691.973 kb on - strand at 691.973 kb on - strand at 691.973 kb on - strand at 691.973 kb on - strand at 691.973 kb on - strand at 692.008 kb on + strand at 692.008 kb on + strand at 692.008 kb on + strand at 692.008 kb on + strand at 692.008 kb on + strand at 692.008 kb on + strand at 692.008 kb on + strand at 692.008 kb on + strand at 692.008 kb on + strand at 692.009 kb on - strand, within MPMX19_00670 at 692.009 kb on - strand, within MPMX19_00670 at 692.009 kb on - strand, within MPMX19_00670 at 692.009 kb on - strand, within MPMX19_00670 at 692.009 kb on - strand, within MPMX19_00670 at 692.009 kb on - strand, within MPMX19_00670 at 692.009 kb on - strand, within MPMX19_00670 at 692.009 kb on - strand, within MPMX19_00670 at 692.009 kb on - strand, within MPMX19_00670 at 692.009 kb on - strand, within MPMX19_00670 at 692.009 kb on - strand, within MPMX19_00670
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.3 remove 690,983 + -0.4 691,004 - -1.3 691,168 + +1.0 691,168 + -0.4 691,168 + -0.6 691,168 + -1.1 691,168 + -0.8 691,287 + -0.2 691,333 + +1.0 691,334 - -0.4 691,334 - +0.5 691,366 + -1.3 691,366 + +0.4 691,423 + +0.4 691,432 + -0.1 691,432 + +0.1 691,432 + -0.1 691,432 + +0.2 691,432 + -1.0 691,433 - -0.6 691,433 - -1.3 691,433 - +1.0 691,433 - -2.1 691,537 + -0.6 691,537 + +0.2 691,537 + -0.1 691,537 + +1.3 691,537 + -1.0 691,537 + +0.8 691,538 - -1.1 691,538 - -0.8 691,538 - -0.9 691,538 - -1.6 691,636 + MPMX19_00669 0.24 -0.3 691,636 + MPMX19_00669 0.24 -0.1 691,636 + MPMX19_00669 0.24 +0.7 691,636 + MPMX19_00669 0.24 +1.4 691,636 + MPMX19_00669 0.24 -1.6 691,637 - MPMX19_00669 0.25 -0.7 691,637 - MPMX19_00669 0.25 -1.3 691,637 - MPMX19_00669 0.25 +0.4 691,637 - MPMX19_00669 0.25 -1.2 691,637 - MPMX19_00669 0.25 -1.0 691,731 + MPMX19_00669 0.58 +0.6 691,759 + MPMX19_00669 0.67 -0.2 691,759 + MPMX19_00669 0.67 -0.9 691,759 + MPMX19_00669 0.67 -0.8 691,759 + MPMX19_00669 0.67 +0.4 691,759 + MPMX19_00669 0.67 +0.6 691,759 + MPMX19_00669 0.67 -1.8 691,759 + MPMX19_00669 0.67 -0.4 691,759 + MPMX19_00669 0.67 -0.8 691,759 + MPMX19_00669 0.67 +1.0 691,759 + MPMX19_00669 0.67 +0.2 691,759 + MPMX19_00669 0.67 -1.1 691,759 + MPMX19_00669 0.67 -0.1 691,759 + MPMX19_00669 0.67 -0.1 691,760 - MPMX19_00669 0.68 -0.6 691,760 - MPMX19_00669 0.68 -0.0 691,760 - MPMX19_00669 0.68 +0.4 691,760 - MPMX19_00669 0.68 +0.4 691,760 - MPMX19_00669 0.68 -0.1 691,760 - MPMX19_00669 0.68 +2.0 691,760 - MPMX19_00669 0.68 +0.7 691,760 - MPMX19_00669 0.68 +0.7 691,760 - MPMX19_00669 0.68 -0.3 691,760 - MPMX19_00669 0.68 -0.7 691,760 - MPMX19_00669 0.68 +1.0 691,760 - MPMX19_00669 0.68 +1.0 691,760 - MPMX19_00669 0.68 +1.0 691,760 - MPMX19_00669 0.68 +0.1 691,760 - MPMX19_00669 0.68 -0.4 691,869 - +0.2 691,869 - -0.5 691,869 - -0.6 691,889 + -2.2 691,889 + -1.0 691,889 + -2.1 691,972 + -0.8 691,972 + -2.9 691,972 + -1.0 691,973 - -2.1 691,973 - -0.3 691,973 - -1.3 691,973 - +1.8 691,973 - -0.8 692,008 + -2.0 692,008 + -0.7 692,008 + -0.5 692,008 + -0.7 692,008 + +0.4 692,008 + -0.3 692,008 + -0.3 692,008 + -2.3 692,008 + -1.1 692,009 - MPMX19_00670 0.10 +0.8 692,009 - MPMX19_00670 0.10 -2.4 692,009 - MPMX19_00670 0.10 -0.1 692,009 - MPMX19_00670 0.10 -0.4 692,009 - MPMX19_00670 0.10 +0.2 692,009 - MPMX19_00670 0.10 -1.1 692,009 - MPMX19_00670 0.10 -2.0 692,009 - MPMX19_00670 0.10 -2.4 692,009 - MPMX19_00670 0.10 -0.2 692,009 - MPMX19_00670 0.10 -0.3 692,009 - MPMX19_00670 0.10 +0.8
Or see this region's nucleotide sequence