Experiment: NL-CCM, start OD=0.3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00522 and MPMX19_00523 are separated by 114 nucleotides MPMX19_00523 and MPMX19_00524 are separated by 106 nucleotides MPMX19_00524 and MPMX19_00525 are separated by 196 nucleotides
MPMX19_00522: MPMX19_00522 - putative zinc protease, at 529,905 to 531,314
_00522
MPMX19_00523: MPMX19_00523 - hypothetical protein, at 531,429 to 532,019
_00523
MPMX19_00524: MPMX19_00524 - Lipoprotein signal peptidase, at 532,126 to 532,641
_00524
MPMX19_00525: MPMX19_00525 - Isoleucine--tRNA ligase, at 532,838 to 535,681
_00525
Position (kb) 532
533 Strain fitness (log2 ratio) -2
-1
0
1 at 531.430 kb on + strand at 531.430 kb on + strand at 531.430 kb on + strand at 531.430 kb on + strand at 531.430 kb on + strand at 531.431 kb on - strand at 531.431 kb on - strand at 531.431 kb on - strand at 531.431 kb on - strand at 532.051 kb on - strand at 532.051 kb on - strand at 532.051 kb on - strand at 532.101 kb on + strand at 532.102 kb on - strand at 532.102 kb on - strand at 532.102 kb on - strand at 532.102 kb on - strand at 532.102 kb on - strand at 532.102 kb on - strand at 532.104 kb on - strand at 532.104 kb on - strand at 532.104 kb on - strand at 532.104 kb on - strand at 532.104 kb on - strand at 532.104 kb on - strand at 532.104 kb on - strand at 532.128 kb on - strand at 532.128 kb on - strand at 532.128 kb on - strand at 532.128 kb on - strand at 532.128 kb on - strand at 532.128 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.725 kb on - strand at 532.813 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.3 remove 531,430 + -1.3 531,430 + +0.5 531,430 + +0.3 531,430 + -2.3 531,430 + +0.7 531,431 - -1.3 531,431 - -0.8 531,431 - -1.1 531,431 - -1.0 532,051 - +0.3 532,051 - +0.3 532,051 - +1.1 532,101 + -1.4 532,102 - +1.0 532,102 - +0.7 532,102 - -0.9 532,102 - -0.5 532,102 - +0.5 532,102 - -1.3 532,104 - -0.3 532,104 - -1.3 532,104 - +1.4 532,104 - -1.7 532,104 - +0.1 532,104 - -0.7 532,104 - -1.8 532,128 - -0.7 532,128 - +0.2 532,128 - -0.0 532,128 - +0.3 532,128 - -0.6 532,128 - -0.8 532,638 - -0.5 532,638 - -0.0 532,638 - -0.0 532,638 - -2.3 532,638 - -0.3 532,638 - -0.6 532,638 - -1.3 532,638 - -1.9 532,638 - -1.1 532,638 - +0.7 532,638 - +0.7 532,638 - +0.6 532,638 - -0.7 532,638 - +0.1 532,638 - +0.0 532,638 - -0.5 532,638 - -0.3 532,638 - -1.1 532,638 - +0.3 532,638 - -2.1 532,638 - -0.7 532,638 - +0.3 532,638 - -0.6 532,638 - -0.5 532,638 - -0.3 532,638 - +0.6 532,638 - -1.1 532,638 - -0.9 532,638 - +0.1 532,638 - -1.1 532,638 - -0.2 532,638 - -1.1 532,638 - +0.1 532,638 - -0.5 532,638 - +0.3 532,638 - +0.0 532,725 - -2.1 532,813 - -1.5
Or see this region's nucleotide sequence