Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00138

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
151,210	+		MPMX19_00137	0.73	-1.3
151,211	-		MPMX19_00137	0.74	+0.1
151,250	+		MPMX19_00137	0.75	-1.4
151,250	+		MPMX19_00137	0.75	-1.7
151,250	+		MPMX19_00137	0.75	-0.4
151,251	-		MPMX19_00137	0.75	-1.5
151,251	-		MPMX19_00137	0.75	-1.3
151,251	-		MPMX19_00137	0.75	-1.4
151,283	+		MPMX19_00137	0.76	-0.8
151,283	+		MPMX19_00137	0.76	+0.6
151,283	+		MPMX19_00137	0.76	+0.2
151,283	+		MPMX19_00137	0.76	-0.9
151,283	+		MPMX19_00137	0.76	-1.5
151,283	+		MPMX19_00137	0.76	-1.1
151,283	+		MPMX19_00137	0.76	-0.8
151,283	+		MPMX19_00137	0.76	-0.8
151,284	-		MPMX19_00137	0.76	-0.9
151,284	-		MPMX19_00137	0.76	+0.2
151,284	-		MPMX19_00137	0.76	-0.2
151,284	-		MPMX19_00137	0.76	-0.7
151,284	-		MPMX19_00137	0.76	+1.9
151,284	-		MPMX19_00137	0.76	+1.0
151,391	-		MPMX19_00137	0.79	+0.1
151,391	-		MPMX19_00137	0.79	+0.1
151,495	+		MPMX19_00137	0.83	-1.2
151,496	-		MPMX19_00137	0.83	-1.4
151,496	-		MPMX19_00137	0.83	-1.6
151,521	+		MPMX19_00137	0.83	-0.8
151,521	+		MPMX19_00137	0.83	-1.0
151,521	+		MPMX19_00137	0.83	-0.8
151,521	+		MPMX19_00137	0.83	-0.5
151,522	-		MPMX19_00137	0.83	-1.0
151,522	-		MPMX19_00137	0.83	+0.4
151,667	+		MPMX19_00137	0.88	-1.3
151,668	-		MPMX19_00137	0.88	-1.5
151,668	-		MPMX19_00137	0.88	+1.0
151,731	+				-1.7
151,731	+				+0.7
151,731	+				+1.7
151,732	-				+0.1
151,732	-				-1.4
151,790	+				-0.5
151,790	+				-0.3
151,790	+				+0.6
151,790	+				-1.6
151,790	+				-1.0
151,790	+				+0.4
151,790	+				-0.5
151,790	+				-0.2
151,790	+				-0.1
151,790	+				-0.8
151,790	+				-1.0
151,790	+				-2.0
151,790	+				-0.3
151,790	+				-0.2
151,790	+				+1.4
151,790	+				+0.2
151,790	+				-0.5
151,791	-				-0.1
151,791	-				+0.0
151,791	-				+0.1
151,791	-				+0.1
151,791	-				-1.3
151,791	-				+1.2
151,791	-				+0.5
151,791	-				-1.0
151,791	-				-1.6
151,791	-				-2.2
151,791	-				-0.1
151,791	-				-0.7
151,791	-				-1.0
151,791	-				+0.3
151,791	-				-0.0
151,791	-				-1.0
151,791	-				-0.8
151,792	+				-1.5
151,792	+				-1.0
151,793	-				-0.1
151,891	+				-1.2
151,891	+				-1.7
151,892	-				-0.1
151,892	-				-1.9
151,892	-				-0.4
151,896	+				-0.8
151,896	+				+0.4
151,896	+				+1.3
151,896	+				+0.3
151,896	+				+0.2
151,896	+				+0.3
151,897	-				-1.7
151,897	-				-0.4
151,897	-				-0.6
151,897	-				-0.5
151,897	-				-0.8
151,897	-				-0.1
151,897	-				-0.5
151,897	-				-2.5
151,897	-				+0.3
151,897	-				-0.1
151,897	-				-2.3
151,897	-				+1.2
151,964	+				-1.0
151,964	+				+0.9
151,964	+				-1.9
151,964	+				-0.3
151,964	+				-0.6
151,964	+				+0.6
151,964	+				-1.1
151,965	-				-0.2
151,965	-				+0.4
151,965	-				-0.1
151,965	-				-1.8
151,965	-				+0.0
151,965	-				-0.3
151,965	-				-1.3
151,965	-				-0.3
151,965	-				-1.0
151,965	-				-1.5
151,965	-				-0.0
151,965	-				-1.2
151,971	-				-0.6
151,971	-				+1.0
151,991	-				-2.1
151,991	-				+0.6
152,045	+				-0.7
152,045	+				-0.1
152,046	-				-1.4
152,051	+				+0.9
152,052	-				-0.3
152,070	+				-0.6
152,070	+				-0.5
152,070	+				-0.4
152,071	-				-2.6
152,071	-				-0.2
152,071	-				-2.0
152,071	-				-1.6
152,071	-				-1.1
152,124	+				-1.6
152,143	-				-0.8
152,164	-				+0.2
152,180	-				+0.2
152,300	+		MPMX19_00138	0.12	-1.7
152,421	-		MPMX19_00138	0.21	-0.9
152,421	-		MPMX19_00138	0.21	-1.5
152,435	+		MPMX19_00138	0.22	+1.3
152,435	+		MPMX19_00138	0.22	+0.1
152,435	+		MPMX19_00138	0.22	+0.3
152,447	+		MPMX19_00138	0.23	-0.8
152,447	+		MPMX19_00138	0.23	+1.2
152,453	+		MPMX19_00138	0.23	-1.0
152,453	+		MPMX19_00138	0.23	+0.2
152,453	+		MPMX19_00138	0.23	+0.5
152,454	-		MPMX19_00138	0.23	+0.2
152,455	+		MPMX19_00138	0.24	+0.0
152,455	+		MPMX19_00138	0.24	-0.6
152,455	+		MPMX19_00138	0.24	+0.2
152,455	+		MPMX19_00138	0.24	+0.2
152,455	+		MPMX19_00138	0.24	-0.7
152,456	-		MPMX19_00138	0.24	+0.2
152,456	-		MPMX19_00138	0.24	+0.6
152,456	-		MPMX19_00138	0.24	+0.2
152,463	+		MPMX19_00138	0.24	-0.4
152,465	+		MPMX19_00138	0.24	-2.6
152,465	+		MPMX19_00138	0.24	+0.3
152,465	+		MPMX19_00138	0.24	-0.5
152,469	-		MPMX19_00138	0.25	-0.6
152,503	+		MPMX19_00138	0.27	-0.5
152,503	+		MPMX19_00138	0.27	-0.6
152,522	+		MPMX19_00138	0.29	-1.7
152,543	+		MPMX19_00138	0.30	+0.4
152,550	+		MPMX19_00138	0.31	+1.2
152,550	+		MPMX19_00138	0.31	-0.8
152,551	-		MPMX19_00138	0.31	+0.5
152,575	-		MPMX19_00138	0.33	-0.1
152,575	-		MPMX19_00138	0.33	-0.1
152,586	-		MPMX19_00138	0.34	+0.6
152,595	+		MPMX19_00138	0.34	+0.6
152,595	+		MPMX19_00138	0.34	+0.3
152,596	-		MPMX19_00138	0.34	+1.2
152,660	+		MPMX19_00138	0.39	-1.5
152,667	+		MPMX19_00138	0.40	-1.4
152,667	+		MPMX19_00138	0.40	+0.3
152,667	+		MPMX19_00138	0.40	-1.0
152,668	-		MPMX19_00138	0.40	-0.6
152,818	-		MPMX19_00138	0.51	-0.9
152,935	-		MPMX19_00138	0.60	+0.1
152,935	-		MPMX19_00138	0.60	+0.9
152,935	-		MPMX19_00138	0.60	-1.5
152,935	-		MPMX19_00138	0.60	-2.7
152,935	-		MPMX19_00138	0.60	-1.3
152,935	-		MPMX19_00138	0.60	-0.8
152,935	-		MPMX19_00138	0.60	-0.1
152,936	+		MPMX19_00138	0.60	+1.7
152,936	+		MPMX19_00138	0.60	+0.6
152,937	-		MPMX19_00138	0.60	-0.4
152,949	+		MPMX19_00138	0.61	-1.3
153,046	+		MPMX19_00138	0.69	+0.4
153,046	+		MPMX19_00138	0.69	+0.4
153,047	-		MPMX19_00138	0.69	-1.1
153,047	-		MPMX19_00138	0.69	-1.0
153,047	-		MPMX19_00138	0.69	+1.3
153,047	-		MPMX19_00138	0.69	+1.1
153,156	+		MPMX19_00138	0.77	-1.4
153,445	+				+0.0
153,537	+				-1.0
153,553	+				-1.6
153,689	+		MPMX19_00139	0.14	-0.1
153,689	+		MPMX19_00139	0.14	-0.7
153,689	+		MPMX19_00139	0.14	-0.8
153,690	-		MPMX19_00139	0.14	-0.0
153,690	-		MPMX19_00139	0.14	+0.6
153,690	-		MPMX19_00139	0.14	-2.1
153,809	+		MPMX19_00139	0.58	+0.2
153,809	+		MPMX19_00139	0.58	-1.8
153,809	+		MPMX19_00139	0.58	-2.0
153,810	-		MPMX19_00139	0.58	-0.6
153,810	-		MPMX19_00139	0.58	+0.5
153,810	-		MPMX19_00139	0.58	-0.2
153,810	-		MPMX19_00139	0.58	-1.0
153,810	-		MPMX19_00139	0.58	+0.2
154,410	+		MPMX19_00140	0.62	-1.8
154,410	+		MPMX19_00140	0.62	-1.4
154,410	+		MPMX19_00140	0.62	-1.2
154,410	+		MPMX19_00140	0.62	-1.5
154,410	+		MPMX19_00140	0.62	+1.3
154,410	+		MPMX19_00140	0.62	-1.7
154,410	+		MPMX19_00140	0.62	-1.7
154,410	+		MPMX19_00140	0.62	-0.1
154,410	+		MPMX19_00140	0.62	+0.5
154,410	+		MPMX19_00140	0.62	-2.1
154,410	+		MPMX19_00140	0.62	-0.5
154,410	+		MPMX19_00140	0.62	-0.7
154,410	+		MPMX19_00140	0.62	-1.3
154,410	+		MPMX19_00140	0.62	-1.4
154,410	+		MPMX19_00140	0.62	-0.5
154,411	-		MPMX19_00140	0.62	+0.5
154,411	-		MPMX19_00140	0.62	-1.9
154,411	-		MPMX19_00140	0.62	-1.0
154,411	-		MPMX19_00140	0.62	-1.2
154,411	-		MPMX19_00140	0.62	-2.0
154,411	-		MPMX19_00140	0.62	+0.0
154,411	-		MPMX19_00140	0.62	-0.5
154,411	-		MPMX19_00140	0.62	-2.1
154,411	-		MPMX19_00140	0.62	-1.7
154,411	-		MPMX19_00140	0.62	-1.4