Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00067

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
67,946	+		MPMX19_00064	0.60	-0.1
67,946	+		MPMX19_00064	0.60	+1.6
67,947	-		MPMX19_00064	0.60	-0.4
67,947	-		MPMX19_00064	0.60	+1.0
67,947	-		MPMX19_00064	0.60	+0.3
67,947	-		MPMX19_00064	0.60	-1.7
67,947	-		MPMX19_00064	0.60	+0.0
67,947	-		MPMX19_00064	0.60	+0.2
67,947	-		MPMX19_00064	0.60	+1.3
67,947	-		MPMX19_00064	0.60	-0.3
67,947	-		MPMX19_00064	0.60	+0.4
67,973	+		MPMX19_00064	0.66	-0.6
67,974	-		MPMX19_00064	0.66	-0.2
67,974	-		MPMX19_00064	0.66	-0.4
67,974	-		MPMX19_00064	0.66	-0.2
67,974	-		MPMX19_00064	0.66	+0.4
68,253	+		MPMX19_00065	0.39	-0.1
68,253	+		MPMX19_00065	0.39	-1.0
68,253	+		MPMX19_00065	0.39	+0.1
68,253	+		MPMX19_00065	0.39	-0.7
68,254	-		MPMX19_00065	0.39	-0.1
68,331	+		MPMX19_00065	0.72	-1.3
68,331	+		MPMX19_00065	0.72	-0.7
68,331	+		MPMX19_00065	0.72	-0.1
68,331	+		MPMX19_00065	0.72	-0.5
68,331	+		MPMX19_00065	0.72	+1.2
68,331	+		MPMX19_00065	0.72	-0.4
68,331	+		MPMX19_00065	0.72	+0.6
68,331	+		MPMX19_00065	0.72	-0.6
68,331	+		MPMX19_00065	0.72	-0.5
68,331	+		MPMX19_00065	0.72	-1.0
68,331	+		MPMX19_00065	0.72	-2.1
68,331	+		MPMX19_00065	0.72	-0.6
68,331	+		MPMX19_00065	0.72	-0.2
68,331	+		MPMX19_00065	0.72	-0.4
68,331	+		MPMX19_00065	0.72	-0.4
68,331	+		MPMX19_00065	0.72	-1.3
68,331	+		MPMX19_00065	0.72	-0.0
68,331	+		MPMX19_00065	0.72	+1.0
68,331	+		MPMX19_00065	0.72	-0.3
68,331	+		MPMX19_00065	0.72	-0.8
68,331	+		MPMX19_00065	0.72	+0.0
68,331	+		MPMX19_00065	0.72	-1.0
68,331	+		MPMX19_00065	0.72	+0.5
68,331	+		MPMX19_00065	0.72	-0.2
68,331	+		MPMX19_00065	0.72	-0.6
68,331	+		MPMX19_00065	0.72	+0.3
68,331	+		MPMX19_00065	0.72	+0.4
68,331	+		MPMX19_00065	0.72	-0.6
68,331	+		MPMX19_00065	0.72	-0.0
68,331	+		MPMX19_00065	0.72	+0.6
68,332	-		MPMX19_00065	0.73	-1.7
68,332	-		MPMX19_00065	0.73	-0.2
68,332	-		MPMX19_00065	0.73	-0.8
68,332	-		MPMX19_00065	0.73	-1.0
68,332	-		MPMX19_00065	0.73	+0.2
68,332	-		MPMX19_00065	0.73	-2.1
68,332	-		MPMX19_00065	0.73	-0.4
68,332	-		MPMX19_00065	0.73	-0.1
68,332	-		MPMX19_00065	0.73	+1.4
68,332	-		MPMX19_00065	0.73	-0.1
68,332	-		MPMX19_00065	0.73	-1.9
68,332	-		MPMX19_00065	0.73	+0.2
68,332	-		MPMX19_00065	0.73	+0.1
68,332	-		MPMX19_00065	0.73	+0.8
68,332	-		MPMX19_00065	0.73	-0.4
68,332	-		MPMX19_00065	0.73	-1.3
68,332	-		MPMX19_00065	0.73	-0.4
68,332	-		MPMX19_00065	0.73	+0.6
68,332	-		MPMX19_00065	0.73	-0.4
68,332	-		MPMX19_00065	0.73	+1.8
68,332	-		MPMX19_00065	0.73	-0.7
68,332	-		MPMX19_00065	0.73	-1.0
68,332	-		MPMX19_00065	0.73	+1.0
68,332	-		MPMX19_00065	0.73	-0.7
68,332	-		MPMX19_00065	0.73	-1.5
68,332	-		MPMX19_00065	0.73	-0.1
68,332	-		MPMX19_00065	0.73	-1.9
68,332	-		MPMX19_00065	0.73	+0.2
68,332	-		MPMX19_00065	0.73	+0.0
68,332	-		MPMX19_00065	0.73	+0.5
68,332	-		MPMX19_00065	0.73	-0.2
68,332	-		MPMX19_00065	0.73	-1.7
68,332	-		MPMX19_00065	0.73	-0.4
68,464	+		MPMX19_00066	0.30	-2.5
68,465	-		MPMX19_00066	0.30	-0.9
68,613	+				-0.7
68,819	+				-0.5
68,819	+				-1.0
68,819	+				-0.1
68,819	+				-1.0
68,819	+				-0.1
68,819	+				-0.8
68,819	+				+0.6
68,819	+				-0.1
68,819	+				+1.1
68,819	+				-0.6
68,819	+				-1.1
68,819	+				+2.2
68,819	+				-0.6
68,819	+				+0.4
68,819	+				-0.1
68,819	+				-0.8
68,819	+				-2.0
68,819	+				+0.7
68,819	+				+1.1
68,819	+				+0.9
68,819	+				-0.7
68,820	-				-0.1
68,820	-				-1.2
68,820	-				-0.8
68,820	-				+0.2
68,820	-				+0.4
68,820	-				-0.7
68,820	-				-0.2
68,820	-				+1.0
68,820	-				-0.4
68,820	-				+0.9
68,820	-				-0.3
68,820	-				+0.4
68,820	-				+0.2
68,820	-				-0.1
68,820	-				+0.9
68,820	-				-1.1
68,820	-				+0.7
68,820	-				+0.3
68,820	-				+1.2
68,820	-				-1.3
68,820	-				-0.5
68,820	-				-0.5
68,820	-				-0.3
68,820	-				-0.4
68,820	-				+0.2
68,820	-				-0.9
68,941	+				+0.2
68,942	-				-1.5
69,018	+				-0.5
69,019	-				+0.2
69,019	-				+0.4
69,019	-				-0.7
69,019	-				-0.1
69,019	-				-0.8
69,019	-				-1.4
69,019	-				-0.6
69,174	+		MPMX19_00067	0.13	-0.5
69,174	+		MPMX19_00067	0.13	+1.0
69,174	+		MPMX19_00067	0.13	+0.7
69,174	+		MPMX19_00067	0.13	-2.5
69,174	+		MPMX19_00067	0.13	-1.4
69,175	-		MPMX19_00067	0.13	+0.8
69,175	-		MPMX19_00067	0.13	+0.9
69,175	-		MPMX19_00067	0.13	-0.6
69,175	-		MPMX19_00067	0.13	+1.0
69,175	-		MPMX19_00067	0.13	-0.1
69,363	+		MPMX19_00067	0.22	-1.0
69,363	+		MPMX19_00067	0.22	-1.0
69,364	-		MPMX19_00067	0.22	-2.0
69,468	+		MPMX19_00067	0.27	-0.4
69,468	+		MPMX19_00067	0.27	-2.1
69,468	+		MPMX19_00067	0.27	-1.1
69,468	+		MPMX19_00067	0.27	-1.3
69,469	-		MPMX19_00067	0.27	-1.1
69,510	+		MPMX19_00067	0.29	+0.0
69,510	+		MPMX19_00067	0.29	-0.6
69,510	+		MPMX19_00067	0.29	-1.2
69,511	-		MPMX19_00067	0.29	+0.4
69,511	-		MPMX19_00067	0.29	-0.1
69,511	-		MPMX19_00067	0.29	-0.8
69,511	-		MPMX19_00067	0.29	+0.7
69,511	-		MPMX19_00067	0.29	-1.1
69,671	+		MPMX19_00067	0.37	-2.1
69,671	+		MPMX19_00067	0.37	+0.3
69,671	+		MPMX19_00067	0.37	-0.6
69,672	-		MPMX19_00067	0.37	+0.2
69,702	+		MPMX19_00067	0.38	-0.3
69,702	+		MPMX19_00067	0.38	-1.7
69,702	+		MPMX19_00067	0.38	-1.2
69,702	+		MPMX19_00067	0.38	-0.6
69,702	+		MPMX19_00067	0.38	-1.8
69,702	+		MPMX19_00067	0.38	-1.6
69,702	+		MPMX19_00067	0.38	+0.6
69,702	+		MPMX19_00067	0.38	+0.9
69,702	+		MPMX19_00067	0.38	+0.5
69,702	+		MPMX19_00067	0.38	-0.2
69,703	-		MPMX19_00067	0.38	+1.9
69,703	-		MPMX19_00067	0.38	+0.2
69,703	-		MPMX19_00067	0.38	-0.6
69,703	-		MPMX19_00067	0.38	-1.3
69,703	-		MPMX19_00067	0.38	-1.1
69,703	-		MPMX19_00067	0.38	-0.9
69,703	-		MPMX19_00067	0.38	-0.6
69,703	-		MPMX19_00067	0.38	-0.4
69,703	-		MPMX19_00067	0.38	-0.6
69,703	-		MPMX19_00067	0.38	+0.0
69,703	-		MPMX19_00067	0.38	-1.7
69,703	-		MPMX19_00067	0.38	-0.5
69,703	-		MPMX19_00067	0.38	-0.3
69,703	-		MPMX19_00067	0.38	+0.9
69,703	-		MPMX19_00067	0.38	+1.1
69,708	+		MPMX19_00067	0.39	-1.0
69,708	+		MPMX19_00067	0.39	-0.0
69,708	+		MPMX19_00067	0.39	+0.4
69,708	+		MPMX19_00067	0.39	+1.5
69,708	+		MPMX19_00067	0.39	-2.8
69,708	+		MPMX19_00067	0.39	+0.6
69,708	+		MPMX19_00067	0.39	-1.3
69,708	+		MPMX19_00067	0.39	-0.6
69,708	+		MPMX19_00067	0.39	-0.1
69,708	+		MPMX19_00067	0.39	-2.9
69,708	+		MPMX19_00067	0.39	+0.3
69,708	+		MPMX19_00067	0.39	-1.1
69,708	+		MPMX19_00067	0.39	-1.0
69,708	+		MPMX19_00067	0.39	+0.8
69,708	+		MPMX19_00067	0.39	+0.3
69,708	+		MPMX19_00067	0.39	+0.1
69,708	+		MPMX19_00067	0.39	-0.9
69,708	+		MPMX19_00067	0.39	-0.2
69,708	+		MPMX19_00067	0.39	-0.8
69,708	+		MPMX19_00067	0.39	-0.1
69,708	+		MPMX19_00067	0.39	+0.0
69,708	+		MPMX19_00067	0.39	-1.5
69,708	+		MPMX19_00067	0.39	-1.1
69,708	+		MPMX19_00067	0.39	-1.2
69,709	-		MPMX19_00067	0.39	-1.5
69,709	-		MPMX19_00067	0.39	+3.2
69,709	-		MPMX19_00067	0.39	-0.7
69,709	-		MPMX19_00067	0.39	+0.2
69,709	-		MPMX19_00067	0.39	-2.2
69,709	-		MPMX19_00067	0.39	-0.3
69,709	-		MPMX19_00067	0.39	+0.4
69,709	-		MPMX19_00067	0.39	-0.1
69,709	-		MPMX19_00067	0.39	-0.0
69,709	-		MPMX19_00067	0.39	-0.6
69,709	-		MPMX19_00067	0.39	-0.6
69,709	-		MPMX19_00067	0.39	+1.2
69,709	-		MPMX19_00067	0.39	-0.7
69,709	-		MPMX19_00067	0.39	-0.7
69,709	-		MPMX19_00067	0.39	-1.4
69,709	-		MPMX19_00067	0.39	+0.6
69,747	+		MPMX19_00067	0.40	+0.2
69,747	+		MPMX19_00067	0.40	-0.5
69,747	+		MPMX19_00067	0.40	+0.6
69,747	+		MPMX19_00067	0.40	-3.0
69,747	+		MPMX19_00067	0.40	+0.3
69,748	-		MPMX19_00067	0.40	-1.5
69,748	-		MPMX19_00067	0.40	+0.1
70,104	+		MPMX19_00067	0.57	+0.2
70,105	-		MPMX19_00067	0.57	-0.5
70,167	+		MPMX19_00067	0.60	+1.2
70,167	+		MPMX19_00067	0.60	+0.1
70,167	+		MPMX19_00067	0.60	-0.8
70,167	+		MPMX19_00067	0.60	+0.9
70,167	+		MPMX19_00067	0.60	-1.0
70,167	+		MPMX19_00067	0.60	-0.3
70,167	+		MPMX19_00067	0.60	-0.6
70,167	+		MPMX19_00067	0.60	-0.9
70,168	-		MPMX19_00067	0.60	+0.1
70,168	-		MPMX19_00067	0.60	+0.9
70,168	-		MPMX19_00067	0.60	-0.1
70,168	-		MPMX19_00067	0.60	-1.5
70,168	-		MPMX19_00067	0.60	-0.4
70,168	-		MPMX19_00067	0.60	-0.0
70,168	-		MPMX19_00067	0.60	-1.0
70,168	-		MPMX19_00067	0.60	+0.2
70,168	-		MPMX19_00067	0.60	-1.1
70,410	+		MPMX19_00067	0.72	-0.3
70,410	+		MPMX19_00067	0.72	+0.8
70,410	+		MPMX19_00067	0.72	-1.6
70,410	+		MPMX19_00067	0.72	-0.4
70,411	-		MPMX19_00067	0.72	-0.6
70,411	-		MPMX19_00067	0.72	+0.1
70,411	-		MPMX19_00067	0.72	+0.0
70,411	-		MPMX19_00067	0.72	+0.6
70,411	-		MPMX19_00067	0.72	-0.8
70,411	-		MPMX19_00067	0.72	-0.1
70,411	-		MPMX19_00067	0.72	-0.0
70,411	-		MPMX19_00067	0.72	-0.5
70,411	-		MPMX19_00067	0.72	-0.6
70,411	-		MPMX19_00067	0.72	-0.4
70,411	-		MPMX19_00067	0.72	-0.1
70,411	-		MPMX19_00067	0.72	+0.2
70,411	-		MPMX19_00067	0.72	-0.4
70,497	+		MPMX19_00067	0.76	-2.6
70,497	+		MPMX19_00067	0.76	-1.6
70,497	+		MPMX19_00067	0.76	+0.2
70,498	-		MPMX19_00067	0.76	+0.2
70,498	-		MPMX19_00067	0.76	+0.3
71,007	+				+0.2
71,007	+				+0.2
71,007	+				-0.4
71,007	+				-2.1
71,008	-				-0.2
71,008	-				+1.0
71,107	+		MPMX19_00068	0.27	+0.6
71,107	+		MPMX19_00068	0.27	+0.6
71,107	+		MPMX19_00068	0.27	-0.1
71,107	+		MPMX19_00068	0.27	-0.1
71,107	+		MPMX19_00068	0.27	+0.5
71,107	+		MPMX19_00068	0.27	-0.6
71,107	+		MPMX19_00068	0.27	-0.3
71,107	+		MPMX19_00068	0.27	-1.3
71,108	-		MPMX19_00068	0.27	-0.7
71,108	-		MPMX19_00068	0.27	+0.1
71,108	-		MPMX19_00068	0.27	-0.6
71,108	-		MPMX19_00068	0.27	+0.2
71,109	+		MPMX19_00068	0.28	-0.1
71,109	+		MPMX19_00068	0.28	-1.1
71,109	+		MPMX19_00068	0.28	+0.9
71,109	+		MPMX19_00068	0.28	-0.8
71,109	+		MPMX19_00068	0.28	-0.1
71,109	+		MPMX19_00068	0.28	-0.3
71,110	-		MPMX19_00068	0.28	-0.9
71,110	-		MPMX19_00068	0.28	-1.0
71,110	-		MPMX19_00068	0.28	-0.4
71,110	-		MPMX19_00068	0.28	-0.8
71,110	-		MPMX19_00068	0.28	-2.5
71,110	-		MPMX19_00068	0.28	+0.4
71,200	+		MPMX19_00068	0.69	-0.5
71,200	+		MPMX19_00068	0.69	-0.3
71,201	-		MPMX19_00068	0.69	-0.8
71,525	+				-1.5
71,525	+				-0.6
71,526	-				-1.5
71,526	-				-0.3
71,657	+		MPMX19_00069	0.18	-0.6
71,657	+		MPMX19_00069	0.18	-0.2
71,657	+		MPMX19_00069	0.18	-0.6
71,657	+		MPMX19_00069	0.18	+1.6
71,657	+		MPMX19_00069	0.18	-1.4
71,657	+		MPMX19_00069	0.18	-1.3
71,657	+		MPMX19_00069	0.18	-0.9
71,657	+		MPMX19_00069	0.18	+0.1
71,657	+		MPMX19_00069	0.18	-0.5
71,657	+		MPMX19_00069	0.18	+0.1
71,657	+		MPMX19_00069	0.18	-0.8
71,657	+		MPMX19_00069	0.18	-0.3
71,657	+		MPMX19_00069	0.18	-0.8
71,657	+		MPMX19_00069	0.18	+0.1
71,658	-		MPMX19_00069	0.18	-0.3
71,658	-		MPMX19_00069	0.18	-1.6
71,658	-		MPMX19_00069	0.18	-0.3
71,658	-		MPMX19_00069	0.18	-0.6
71,658	-		MPMX19_00069	0.18	-0.2
71,658	-		MPMX19_00069	0.18	-0.0
71,658	-		MPMX19_00069	0.18	-0.4
71,658	-		MPMX19_00069	0.18	-0.9
71,658	-		MPMX19_00069	0.18	-1.3
71,658	-		MPMX19_00069	0.18	-0.1
71,658	-		MPMX19_00069	0.18	+0.3
71,658	-		MPMX19_00069	0.18	-1.0
71,658	-		MPMX19_00069	0.18	+1.0
71,658	-		MPMX19_00069	0.18	+0.5
71,658	-		MPMX19_00069	0.18	+0.0
71,658	-		MPMX19_00069	0.18	-1.8
71,658	-		MPMX19_00069	0.18	-1.0
71,658	-		MPMX19_00069	0.18	+0.5
71,852	+		MPMX19_00069	0.29	+0.2
71,852	+		MPMX19_00069	0.29	-1.0
71,852	+		MPMX19_00069	0.29	+0.6
71,852	+		MPMX19_00069	0.29	+0.6
71,852	+		MPMX19_00069	0.29	-1.0
71,852	+		MPMX19_00069	0.29	-1.3
71,853	-		MPMX19_00069	0.29	+1.8
71,853	-		MPMX19_00069	0.29	+0.2
71,853	-		MPMX19_00069	0.29	-1.9