Experiment: D-Glucose and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4751 and GFF4752 overlap by 8 nucleotides GFF4752 and GFF4753 are separated by 19 nucleotides GFF4753 and GFF4754 are separated by 3 nucleotides GFF4754 and GFF4755 overlap by 1 nucleotides
GFF4751 - hypothetical protein, at 11,363 to 12,346
GFF4751
GFF4752 - Thymidylate kinase, at 12,339 to 12,971
GFF4752
GFF4753 - Endolytic murein transglycosylase, at 12,991 to 14,172
GFF4753
GFF4754 - Aminodeoxychorismate lyase, at 14,176 to 14,991
GFF4754
GFF4755 - 3-oxoacyl-[acyl-carrier-protein] synthase 2, at 14,991 to 16,235
GFF4755
Position (kb) 12
13
14
15 Strain fitness (log2 ratio) -2
-1
0
1
2 at 12.334 kb on - strand at 13.353 kb on - strand, within GFF4753 at 13.353 kb on - strand, within GFF4753 at 13.353 kb on - strand, within GFF4753 at 13.353 kb on - strand, within GFF4753 at 13.353 kb on - strand, within GFF4753 at 13.353 kb on - strand, within GFF4753 at 13.362 kb on - strand, within GFF4753 at 13.362 kb on - strand, within GFF4753 at 13.362 kb on - strand, within GFF4753 at 13.362 kb on - strand, within GFF4753 at 13.362 kb on - strand, within GFF4753 at 13.425 kb on - strand, within GFF4753 at 13.425 kb on - strand, within GFF4753 at 13.569 kb on - strand, within GFF4753 at 13.677 kb on - strand, within GFF4753 at 13.681 kb on - strand, within GFF4753 at 13.956 kb on - strand, within GFF4753 at 14.014 kb on - strand, within GFF4753 at 14.026 kb on - strand, within GFF4753 at 14.026 kb on - strand, within GFF4753 at 14.026 kb on - strand, within GFF4753 at 14.026 kb on - strand, within GFF4753 at 14.457 kb on + strand, within GFF4754 at 14.458 kb on - strand, within GFF4754 at 14.465 kb on + strand, within GFF4754 at 14.465 kb on + strand, within GFF4754 at 14.465 kb on + strand, within GFF4754 at 14.466 kb on - strand, within GFF4754 at 14.466 kb on - strand, within GFF4754 at 14.598 kb on + strand, within GFF4754 at 14.598 kb on + strand, within GFF4754 at 14.599 kb on - strand, within GFF4754 at 14.599 kb on - strand, within GFF4754 at 14.602 kb on + strand, within GFF4754 at 14.783 kb on + strand, within GFF4754 at 14.783 kb on + strand, within GFF4754 at 14.784 kb on - strand, within GFF4754 at 14.784 kb on - strand, within GFF4754 at 14.784 kb on - strand, within GFF4754 at 14.784 kb on - strand, within GFF4754 at 15.077 kb on + strand at 15.077 kb on + strand at 15.078 kb on - strand at 15.078 kb on - strand at 15.078 kb on - strand at 15.096 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and casaminos (C) remove 12,334 - -0.2 13,353 - GFF4753 0.31 +1.5 13,353 - GFF4753 0.31 +1.0 13,353 - GFF4753 0.31 +0.4 13,353 - GFF4753 0.31 +0.4 13,353 - GFF4753 0.31 -2.0 13,353 - GFF4753 0.31 +0.3 13,362 - GFF4753 0.31 -1.7 13,362 - GFF4753 0.31 -0.9 13,362 - GFF4753 0.31 -0.1 13,362 - GFF4753 0.31 +0.3 13,362 - GFF4753 0.31 -2.1 13,425 - GFF4753 0.37 +2.2 13,425 - GFF4753 0.37 +0.9 13,569 - GFF4753 0.49 +0.3 13,677 - GFF4753 0.58 +0.4 13,681 - GFF4753 0.58 +1.2 13,956 - GFF4753 0.82 -0.2 14,014 - GFF4753 0.87 +1.0 14,026 - GFF4753 0.88 -0.7 14,026 - GFF4753 0.88 +0.0 14,026 - GFF4753 0.88 -0.4 14,026 - GFF4753 0.88 +0.4 14,457 + GFF4754 0.34 -0.1 14,458 - GFF4754 0.35 -0.1 14,465 + GFF4754 0.35 -1.7 14,465 + GFF4754 0.35 -0.5 14,465 + GFF4754 0.35 +0.6 14,466 - GFF4754 0.36 -0.1 14,466 - GFF4754 0.36 -2.7 14,598 + GFF4754 0.52 -0.7 14,598 + GFF4754 0.52 -0.2 14,599 - GFF4754 0.52 +1.3 14,599 - GFF4754 0.52 -1.3 14,602 + GFF4754 0.52 -0.0 14,783 + GFF4754 0.74 -0.1 14,783 + GFF4754 0.74 -0.4 14,784 - GFF4754 0.75 +0.2 14,784 - GFF4754 0.75 +0.5 14,784 - GFF4754 0.75 +0.3 14,784 - GFF4754 0.75 +0.5 15,077 + -0.5 15,077 + -0.4 15,078 - -2.4 15,078 - -0.2 15,078 - +0.1 15,096 + -1.4
Or see this region's nucleotide sequence