Experiment: D-Glucose and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4688 and GFF4689 overlap by 8 nucleotides GFF4689 and GFF4690 are separated by 2 nucleotides GFF4690 and GFF4691 are separated by 334 nucleotides GFF4691 and GFF4692 are separated by 12 nucleotides
GFF4688 - Multidrug resistance ABC transporter ATP-binding/permease protein BmrA, at 184,061 to 185,878
GFF4688
GFF4689 - hypothetical protein, at 185,871 to 186,506
GFF4689
GFF4690 - hypothetical protein, at 186,509 to 187,450
GFF4690
GFF4691 - DNA-binding transcriptional regulator BolA, at 187,785 to 188,084
GFF4691
GFF4692 - hypothetical protein, at 188,097 to 188,612
GFF4692
Position (kb) 186
187
188 Strain fitness (log2 ratio) -2
-1
0
1
2 at 185.617 kb on + strand, within GFF4688 at 185.618 kb on - strand, within GFF4688 at 185.618 kb on - strand, within GFF4688 at 185.619 kb on + strand, within GFF4688 at 185.619 kb on + strand, within GFF4688 at 185.619 kb on + strand, within GFF4688 at 185.619 kb on + strand, within GFF4688 at 185.620 kb on - strand, within GFF4688 at 185.620 kb on - strand, within GFF4688 at 185.846 kb on + strand at 185.846 kb on + strand at 185.847 kb on - strand at 186.487 kb on + strand at 186.487 kb on + strand at 186.487 kb on + strand at 186.487 kb on + strand at 186.487 kb on + strand at 186.488 kb on - strand at 186.510 kb on + strand at 186.510 kb on + strand at 186.511 kb on - strand at 186.511 kb on - strand at 186.532 kb on + strand at 186.532 kb on + strand at 186.532 kb on + strand at 186.532 kb on + strand at 186.532 kb on + strand at 186.532 kb on + strand at 186.533 kb on - strand at 186.533 kb on - strand at 186.533 kb on - strand at 186.533 kb on - strand at 186.533 kb on - strand at 186.533 kb on - strand at 186.534 kb on + strand at 186.534 kb on + strand at 186.534 kb on + strand at 186.534 kb on + strand at 186.534 kb on + strand at 186.534 kb on + strand at 186.534 kb on + strand at 186.534 kb on + strand at 186.534 kb on + strand at 186.535 kb on - strand at 186.535 kb on - strand at 186.535 kb on - strand at 186.535 kb on - strand at 186.535 kb on - strand at 186.535 kb on - strand at 186.535 kb on - strand at 186.535 kb on - strand at 186.540 kb on + strand at 186.540 kb on + strand at 186.541 kb on - strand at 186.666 kb on + strand, within GFF4690 at 186.666 kb on + strand, within GFF4690 at 186.666 kb on + strand, within GFF4690 at 186.666 kb on + strand, within GFF4690 at 186.667 kb on - strand, within GFF4690 at 186.667 kb on - strand, within GFF4690 at 186.852 kb on + strand, within GFF4690 at 186.853 kb on - strand, within GFF4690 at 186.853 kb on - strand, within GFF4690 at 186.853 kb on - strand, within GFF4690 at 186.853 kb on - strand, within GFF4690 at 186.882 kb on + strand, within GFF4690 at 186.882 kb on + strand, within GFF4690 at 186.882 kb on + strand, within GFF4690 at 186.882 kb on + strand, within GFF4690 at 186.969 kb on + strand, within GFF4690 at 186.970 kb on - strand, within GFF4690 at 186.970 kb on - strand, within GFF4690 at 187.041 kb on + strand, within GFF4690 at 187.041 kb on + strand, within GFF4690 at 187.042 kb on - strand, within GFF4690 at 187.113 kb on + strand, within GFF4690 at 187.113 kb on + strand, within GFF4690 at 187.113 kb on + strand, within GFF4690 at 187.114 kb on - strand, within GFF4690 at 187.194 kb on + strand, within GFF4690 at 187.194 kb on + strand, within GFF4690 at 187.195 kb on - strand, within GFF4690 at 187.195 kb on - strand, within GFF4690 at 187.215 kb on + strand, within GFF4690 at 187.395 kb on + strand at 187.396 kb on - strand at 187.419 kb on + strand at 187.454 kb on + strand at 187.454 kb on + strand at 187.454 kb on + strand at 187.454 kb on + strand at 187.455 kb on - strand at 187.455 kb on - strand at 187.455 kb on - strand at 187.537 kb on - strand at 187.537 kb on - strand at 187.537 kb on - strand at 187.563 kb on + strand at 187.564 kb on - strand at 187.564 kb on - strand at 187.564 kb on - strand at 187.607 kb on + strand at 187.608 kb on - strand at 187.634 kb on + strand at 187.635 kb on - strand at 187.684 kb on - strand at 187.684 kb on - strand at 187.710 kb on + strand at 187.711 kb on - strand at 187.747 kb on + strand at 187.747 kb on + strand at 187.748 kb on - strand at 187.748 kb on - strand at 187.748 kb on - strand at 187.751 kb on + strand at 187.797 kb on - strand at 187.858 kb on + strand, within GFF4691 at 187.859 kb on - strand, within GFF4691 at 187.859 kb on - strand, within GFF4691 at 187.859 kb on - strand, within GFF4691 at 187.912 kb on + strand, within GFF4691 at 187.979 kb on - strand, within GFF4691 at 188.043 kb on + strand, within GFF4691 at 188.044 kb on - strand, within GFF4691 at 188.098 kb on + strand at 188.099 kb on - strand at 188.266 kb on + strand, within GFF4692 at 188.266 kb on + strand, within GFF4692 at 188.267 kb on - strand, within GFF4692 at 188.267 kb on - strand, within GFF4692 at 188.267 kb on - strand, within GFF4692 at 188.314 kb on + strand, within GFF4692 at 188.315 kb on - strand, within GFF4692
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and casaminos (C) remove 185,617 + GFF4688 0.86 +0.7 185,618 - GFF4688 0.86 +0.2 185,618 - GFF4688 0.86 +0.8 185,619 + GFF4688 0.86 +0.5 185,619 + GFF4688 0.86 +0.1 185,619 + GFF4688 0.86 +0.7 185,619 + GFF4688 0.86 -0.9 185,620 - GFF4688 0.86 +0.7 185,620 - GFF4688 0.86 -0.7 185,846 + +0.5 185,846 + +0.5 185,847 - -0.7 186,487 + -0.4 186,487 + -1.3 186,487 + +0.5 186,487 + -0.5 186,487 + -0.0 186,488 - +0.5 186,510 + +0.1 186,510 + -0.2 186,511 - +0.7 186,511 - +0.1 186,532 + -0.3 186,532 + +0.7 186,532 + -0.0 186,532 + +1.4 186,532 + +0.9 186,532 + +0.4 186,533 - -1.3 186,533 - -0.3 186,533 - +1.3 186,533 - +0.4 186,533 - -0.7 186,533 - +0.1 186,534 + -0.2 186,534 + -1.0 186,534 + +0.6 186,534 + +0.7 186,534 + -2.0 186,534 + +1.4 186,534 + -0.1 186,534 + +0.4 186,534 + +0.5 186,535 - -0.4 186,535 - -0.5 186,535 - +2.3 186,535 - +0.1 186,535 - -0.9 186,535 - +0.6 186,535 - -0.2 186,535 - -0.8 186,540 + +1.0 186,540 + +0.5 186,541 - -0.3 186,666 + GFF4690 0.17 +0.4 186,666 + GFF4690 0.17 +0.4 186,666 + GFF4690 0.17 -0.1 186,666 + GFF4690 0.17 -0.3 186,667 - GFF4690 0.17 -0.8 186,667 - GFF4690 0.17 -0.2 186,852 + GFF4690 0.36 +0.5 186,853 - GFF4690 0.37 -1.1 186,853 - GFF4690 0.37 +0.6 186,853 - GFF4690 0.37 +0.2 186,853 - GFF4690 0.37 -0.4 186,882 + GFF4690 0.40 -0.9 186,882 + GFF4690 0.40 +0.3 186,882 + GFF4690 0.40 -0.0 186,882 + GFF4690 0.40 +0.3 186,969 + GFF4690 0.49 -1.3 186,970 - GFF4690 0.49 -0.1 186,970 - GFF4690 0.49 -0.3 187,041 + GFF4690 0.56 +0.1 187,041 + GFF4690 0.56 +0.0 187,042 - GFF4690 0.57 -1.4 187,113 + GFF4690 0.64 -0.7 187,113 + GFF4690 0.64 -0.4 187,113 + GFF4690 0.64 -0.2 187,114 - GFF4690 0.64 +0.5 187,194 + GFF4690 0.73 -0.1 187,194 + GFF4690 0.73 -0.1 187,195 - GFF4690 0.73 +0.1 187,195 - GFF4690 0.73 -0.4 187,215 + GFF4690 0.75 -0.7 187,395 + -1.4 187,396 - +0.1 187,419 + +0.3 187,454 + +0.7 187,454 + -2.3 187,454 + -0.3 187,454 + -0.7 187,455 - -1.9 187,455 - +0.4 187,455 - -0.1 187,537 - -0.6 187,537 - -0.4 187,537 - +0.4 187,563 + -0.2 187,564 - -0.3 187,564 - -1.0 187,564 - +0.9 187,607 + -0.4 187,608 - -0.4 187,634 + -0.1 187,635 - -0.3 187,684 - +0.6 187,684 - +0.3 187,710 + +0.8 187,711 - -0.6 187,747 + -0.3 187,747 + +0.6 187,748 - +1.0 187,748 - -0.9 187,748 - -0.5 187,751 + -0.4 187,797 - +0.2 187,858 + GFF4691 0.24 -1.0 187,859 - GFF4691 0.25 -0.2 187,859 - GFF4691 0.25 +0.9 187,859 - GFF4691 0.25 -1.4 187,912 + GFF4691 0.42 +0.1 187,979 - GFF4691 0.65 +0.2 188,043 + GFF4691 0.86 -0.5 188,044 - GFF4691 0.86 +0.1 188,098 + -0.6 188,099 - -0.3 188,266 + GFF4692 0.33 -0.9 188,266 + GFF4692 0.33 -0.2 188,267 - GFF4692 0.33 +1.0 188,267 - GFF4692 0.33 -1.0 188,267 - GFF4692 0.33 -0.4 188,314 + GFF4692 0.42 -1.1 188,315 - GFF4692 0.42 -1.7
Or see this region's nucleotide sequence